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The map label for this gene is ybzH [H]

Identifier: 52784037

GI number: 52784037

Start: 187899

End: 188210

Strand: Direct

Name: ybzH [H]

Synonym: BLi00209

Alternate gene names: 52784037

Gene position: 187899-188210 (Clockwise)

Preceding gene: 52784033

Following gene: 52784038

Centisome position: 4.45

GC content: 42.31

Gene sequence:

>312_bases
ATGATTGGTATGGAACCTATTGAAATTTTCAAAGCTTTATCAAATGAATCAAGGCTGCAAATTTTGCAATGGCTGAAGGA
GCCTGATCGTCATTTTAAGCCCCATGAAGGGATTGATATGAACACAATCGGGGTGTGTGTCAGCCAAATCACGGACAAAT
TGAAAATGACGCAATCGACGGCTTCCCAATATCTCGCGATCCTTTTAAGAGCCGGCCTGATTAAGGCGGAGCGAATCGGA
AAGTATACGTACTACAAAAGAGACGAAGAGGCCATTGGAAAGCTTGCTGACTTTCTTAAAACAGAGATATGA

Upstream 100 bases:

>100_bases
ACGATTTTTTTATTCTTTGGGGAGTGAATTGTCAGCCAGAATTTGATGTTAAGAATAAAAGGGCACAATACATATTGACA
ATTTTCGATATGAAGATATA

Downstream 100 bases:

>100_bases
TGAGCATTAAAAAATAAACATCTCTTGATGATGTTTATTTTTACACCATACATATCGACATATTTCGATGTGTTTATTTT
TTAATTTTACATATCGTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 103; Mature: 103

Protein sequence:

>103_residues
MIGMEPIEIFKALSNESRLQILQWLKEPDRHFKPHEGIDMNTIGVCVSQITDKLKMTQSTASQYLAILLRAGLIKAERIG
KYTYYKRDEEAIGKLADFLKTEI

Sequences:

>Translated_103_residues
MIGMEPIEIFKALSNESRLQILQWLKEPDRHFKPHEGIDMNTIGVCVSQITDKLKMTQSTASQYLAILLRAGLIKAERIG
KYTYYKRDEEAIGKLADFLKTEI
>Mature_103_residues
MIGMEPIEIFKALSNESRLQILQWLKEPDRHFKPHEGIDMNTIGVCVSQITDKLKMTQSTASQYLAILLRAGLIKAERIG
KYTYYKRDEEAIGKLADFLKTEI

Specific function: Unknown

COG id: COG0640

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001845
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01022 HTH_5 [H]

EC number: NA

Molecular weight: Translated: 11844; Mature: 11844

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGMEPIEIFKALSNESRLQILQWLKEPDRHFKPHEGIDMNTIGVCVSQITDKLKMTQST
CCCCHHHHHHHHHCCCHHHHHHHHHHCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
ASQYLAILLRAGLIKAERIGKYTYYKRDEEAIGKLADFLKTEI
HHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIGMEPIEIFKALSNESRLQILQWLKEPDRHFKPHEGIDMNTIGVCVSQITDKLKMTQST
CCCCHHHHHHHHHCCCHHHHHHHHHHCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
ASQYLAILLRAGLIKAERIGKYTYYKRDEEAIGKLADFLKTEI
HHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]