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The map label for this gene is ybaS [H]

Identifier: 52784016

GI number: 52784016

Start: 165261

End: 166238

Strand: Direct

Name: ybaS [H]

Synonym: BLi00183

Alternate gene names: 52784016

Gene position: 165261-166238 (Clockwise)

Preceding gene: 52784015

Following gene: 52784017

Centisome position: 3.91

GC content: 47.34

Gene sequence:

>978_bases
ATGCTTCAGACAATCAATAAAACACTTGGTAAGATTATGCCTTTGCTGACGCCTTTAAGCGTTGTCAGCGGAGTACTGCT
TGCAGATTATTTAAATGGGCTGGCGAGTCTTGTGCCGTGGATTTTTGCGTTTATGACGTTTGCCGGCAGCCTGGGAGCAA
ATTTTCAGTCGCTGAAAACAGCGGTGGCTCATCCCTTGCCGATGTTTCTCGCTTTATTTGTTTTGCACATATTTATGCCT
GTTTTGGCATGGAGCACGGGGCATCTTGTGTTTAGCGGGGATTCATTGACGATTACAGGGCTTACCCTTGGTGTTGTCAT
TCCGACGGGTATTACGAGCATGATTTGGGCTGCAATGTATAAAGGTAACATCGGTTTAACCCTGTCAATTATTTTAGTGG
ACACGATTCTTTCGCCTTTTATTGTTCCATTCAGTCTTTCCATCTTGGCCGGGGCGCATGTTGAAATGGATGTCATCGGC
ATGATGAAGGGGTTAGTTGGAATGATTGTGATTCCTTCTTTATTGGGAATGCTCGTCAATCAATTTTCAACGCCGGAGCG
GACAGTGCGATTAAGCGCAAATTGTGCTCCGTTTTCGAAAGTCGGGTTAGCCGCCGTAGTGGCGATTAACAGCTCGGTGG
TCGCTCCTTACCTTAAAAACGTCGATTTAAAGTTTTTAACGATAGCCGTTACGGTCTTTTTGGTGGCATTTACAGGCTAC
CTGACAGCTTGGCTGATAGGACGGCTGATGAAGCGGCCCCAGGAGGAAATCGTGGCTTTAATTTTTACTGGAGGAATGCG
GAATATTAGCGCGGGCGCTGTGTTGGCCACTAGCTTTTTTCCGCCTCAAGTGGCGGTGCCCGTTGTCATTGGCATGCTGT
TCCAACAGATTCTGGCCGCGCTGTTTGGGCATTTGCTTGCAAGAAGCGAGCTGAAAAAAGCGCATCATTTGGACAAAAAG
ACGAGTCTGCCCTCATAG

Upstream 100 bases:

>100_bases
TCATCCTGCCTTCTTTCTGTATTCCCTTCCTGTTTTGATATTCCATCTTTTGTTATAATGAATGTAAATTCGATTTAAAG
AGAGCGGGCGTTTTACATCT

Downstream 100 bases:

>100_bases
TTGGCAGACTCAGATCTTGCGGGAGTTAAATATAATGAAAACCAATAGAGTAAGTGTAATGATCTGGACTTTAATCTCCG
CTTTTCTGTTTTGTTCTATG

Product: YbaS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MLQTINKTLGKIMPLLTPLSVVSGVLLADYLNGLASLVPWIFAFMTFAGSLGANFQSLKTAVAHPLPMFLALFVLHIFMP
VLAWSTGHLVFSGDSLTITGLTLGVVIPTGITSMIWAAMYKGNIGLTLSIILVDTILSPFIVPFSLSILAGAHVEMDVIG
MMKGLVGMIVIPSLLGMLVNQFSTPERTVRLSANCAPFSKVGLAAVVAINSSVVAPYLKNVDLKFLTIAVTVFLVAFTGY
LTAWLIGRLMKRPQEEIVALIFTGGMRNISAGAVLATSFFPPQVAVPVVIGMLFQQILAALFGHLLARSELKKAHHLDKK
TSLPS

Sequences:

>Translated_325_residues
MLQTINKTLGKIMPLLTPLSVVSGVLLADYLNGLASLVPWIFAFMTFAGSLGANFQSLKTAVAHPLPMFLALFVLHIFMP
VLAWSTGHLVFSGDSLTITGLTLGVVIPTGITSMIWAAMYKGNIGLTLSIILVDTILSPFIVPFSLSILAGAHVEMDVIG
MMKGLVGMIVIPSLLGMLVNQFSTPERTVRLSANCAPFSKVGLAAVVAINSSVVAPYLKNVDLKFLTIAVTVFLVAFTGY
LTAWLIGRLMKRPQEEIVALIFTGGMRNISAGAVLATSFFPPQVAVPVVIGMLFQQILAALFGHLLARSELKKAHHLDKK
TSLPS
>Mature_325_residues
MLQTINKTLGKIMPLLTPLSVVSGVLLADYLNGLASLVPWIFAFMTFAGSLGANFQSLKTAVAHPLPMFLALFVLHIFMP
VLAWSTGHLVFSGDSLTITGLTLGVVIPTGITSMIWAAMYKGNIGLTLSIILVDTILSPFIVPFSLSILAGAHVEMDVIG
MMKGLVGMIVIPSLLGMLVNQFSTPERTVRLSANCAPFSKVGLAAVVAINSSVVAPYLKNVDLKFLTIAVTVFLVAFTGY
LTAWLIGRLMKRPQEEIVALIFTGGMRNISAGAVLATSFFPPQVAVPVVIGMLFQQILAALFGHLLARSELKKAHHLDKK
TSLPS

Specific function: Unknown

COG id: COG0385

COG function: function code R; Predicted Na+-dependent transporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002657 [H]

Pfam domain/function: PF01758 SBF [H]

EC number: NA

Molecular weight: Translated: 34704; Mature: 34704

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQTINKTLGKIMPLLTPLSVVSGVLLADYLNGLASLVPWIFAFMTFAGSLGANFQSLKT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
AVAHPLPMFLALFVLHIFMPVLAWSTGHLVFSGDSLTITGLTLGVVIPTGITSMIWAAMY
HHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCEEEEEEEHEEHHHHCCHHHHHHHHHH
KGNIGLTLSIILVDTILSPFIVPFSLSILAGAHVEMDVIGMMKGLVGMIVIPSLLGMLVN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QFSTPERTVRLSANCAPFSKVGLAAVVAINSSVVAPYLKNVDLKFLTIAVTVFLVAFTGY
HCCCCCCEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
LTAWLIGRLMKRPQEEIVALIFTGGMRNISAGAVLATSFFPPQVAVPVVIGMLFQQILAA
HHHHHHHHHHHCCHHHHEEHHEECCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHH
LFGHLLARSELKKAHHLDKKTSLPS
HHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MLQTINKTLGKIMPLLTPLSVVSGVLLADYLNGLASLVPWIFAFMTFAGSLGANFQSLKT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
AVAHPLPMFLALFVLHIFMPVLAWSTGHLVFSGDSLTITGLTLGVVIPTGITSMIWAAMY
HHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCEEEEEEEHEEHHHHCCHHHHHHHHHH
KGNIGLTLSIILVDTILSPFIVPFSLSILAGAHVEMDVIGMMKGLVGMIVIPSLLGMLVN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QFSTPERTVRLSANCAPFSKVGLAAVVAINSSVVAPYLKNVDLKFLTIAVTVFLVAFTGY
HCCCCCCEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
LTAWLIGRLMKRPQEEIVALIFTGGMRNISAGAVLATSFFPPQVAVPVVIGMLFQQILAA
HHHHHHHHHHHCCHHHHEEHHEECCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHH
LFGHLLARSELKKAHHLDKKTSLPS
HHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9274029; 9384377 [H]