Click here to switch to the map view.

The map label for this gene is wcaA [C]

Identifier: 52144127

GI number: 52144127

Start: 1211186

End: 1212127

Strand: Reverse

Name: wcaA [C]

Synonym: BCZK1101

Alternate gene names: 52144127

Gene position: 1212127-1211186 (Counterclockwise)

Preceding gene: 52144125

Following gene: 52144126

Centisome position: 22.87

GC content: 32.06

Gene sequence:

>942_bases
TTGTATATGGAAATTATAAAAAATGTACCTCTCGTTTCCATCCTTATTCCTACCTATAATCGGCCACATTATTTTAAAAT
TGCTCTAGAAAGTGTATTAGCACAAACGTATTCAAATATTGAAATTATTGTAGGAGACGATAGCACAAATAATGAAACAG
AAAAATTAATATACAGAGATTATTTACATAAGCATAAACATATAACGTACATTCGAAACCCCTCTACTTTAGGACAATTT
CATAACGCCCTTATGCTTTTAGAACAATCAAATGGAGAGTACATAAATTTCTTAATGGACGATGATATATTTTATAATAA
TAAAATTGAAAAAATGATGTTTTATTTCCAAAAAGACTTAGATCAAAATCTCGCACTTATTACATCTTATCGTACTTGGA
TTAATGATGATGGAGATATAATTGAACAACACCCCTCCATGAAAAGATTATATGATGAAGATACTCTATTAAATGGGAAA
GATCTTGGAAACCGTATGCTTATACTAGGGCAAAATATTATTGGTGAACCTACGACTGTACTCTTTCGAAAACGCCTATT
AACAGAACCTTTCGGTACTTTAAATGGTAGAAATTATAATTGTAGTGTGGATATGGCTTCTTGGATCAGTTTACTTTCCA
AAGGTGATGCGATCTATATTACGGAACCTTTAAGTTCTTTCCGCCTTCATACGGGACAGCAAGTACATCACAAATACCTT
GAAGGTTGCGAAGATTTTTCACATCTCGTTTTACATTCAAAGAAATATGGTTTTCTACAAGAGATTGACTATTACAAAAC
GAGTCTGTTAAAAGCTTGCGAATGGTATAAAAACGCTACAACATTTTATCAGCTATATCCAGAACTCATTCCAACGACCG
ATACACATACTCGCCTTTCTCATTGTTTGAATATAGTTACAAAAGAACTCCATGCAATATAA

Upstream 100 bases:

>100_bases
AGAAATGCAGACTCCTCCCCATTATGGTTCATGGTGTGGCAGAACTGAACACACTAGTTATCAAGATATTATTCTTACAC
AGAAAATTTCTGAAAGGTAG

Downstream 100 bases:

>100_bases
TCCATCACAAGGGGGAATTCCTTCCTTGTGATGTATGACTTCCCGCAAATAGTGGAATAAATGTATGCATAGTCTGCTTG
TATATTATTTTTTTCATGAC

Product: glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MYMEIIKNVPLVSILIPTYNRPHYFKIALESVLAQTYSNIEIIVGDDSTNNETEKLIYRDYLHKHKHITYIRNPSTLGQF
HNALMLLEQSNGEYINFLMDDDIFYNNKIEKMMFYFQKDLDQNLALITSYRTWINDDGDIIEQHPSMKRLYDEDTLLNGK
DLGNRMLILGQNIIGEPTTVLFRKRLLTEPFGTLNGRNYNCSVDMASWISLLSKGDAIYITEPLSSFRLHTGQQVHHKYL
EGCEDFSHLVLHSKKYGFLQEIDYYKTSLLKACEWYKNATTFYQLYPELIPTTDTHTRLSHCLNIVTKELHAI

Sequences:

>Translated_313_residues
MYMEIIKNVPLVSILIPTYNRPHYFKIALESVLAQTYSNIEIIVGDDSTNNETEKLIYRDYLHKHKHITYIRNPSTLGQF
HNALMLLEQSNGEYINFLMDDDIFYNNKIEKMMFYFQKDLDQNLALITSYRTWINDDGDIIEQHPSMKRLYDEDTLLNGK
DLGNRMLILGQNIIGEPTTVLFRKRLLTEPFGTLNGRNYNCSVDMASWISLLSKGDAIYITEPLSSFRLHTGQQVHHKYL
EGCEDFSHLVLHSKKYGFLQEIDYYKTSLLKACEWYKNATTFYQLYPELIPTTDTHTRLSHCLNIVTKELHAI
>Mature_313_residues
MYMEIIKNVPLVSILIPTYNRPHYFKIALESVLAQTYSNIEIIVGDDSTNNETEKLIYRDYLHKHKHITYIRNPSTLGQF
HNALMLLEQSNGEYINFLMDDDIFYNNKIEKMMFYFQKDLDQNLALITSYRTWINDDGDIIEQHPSMKRLYDEDTLLNGK
DLGNRMLILGQNIIGEPTTVLFRKRLLTEPFGTLNGRNYNCSVDMASWISLLSKGDAIYITEPLSSFRLHTGQQVHHKYL
EGCEDFSHLVLHSKKYGFLQEIDYYKTSLLKACEWYKNATTFYQLYPELIPTTDTHTRLSHCLNIVTKELHAI

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1788372, Length=175, Percent_Identity=32.5714285714286, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 36658; Mature: 36658

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYMEIIKNVPLVSILIPTYNRPHYFKIALESVLAQTYSNIEIIVGDDSTNNETEKLIYRD
CHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHH
YLHKHKHITYIRNPSTLGQFHNALMLLEQSNGEYINFLMDDDIFYNNKIEKMMFYFQKDL
HHHHCCCEEEEECCHHHHHHHHHEEEEECCCCCEEEEEECCCEEECCHHHHHHHHHHHHH
DQNLALITSYRTWINDDGDIIEQHPSMKRLYDEDTLLNGKDLGNRMLILGQNIIGEPTTV
CCCHHHEEHHHHHCCCCCHHHHCCCCHHHHCCCCCCCCCCCCCCEEEEEECCCCCCHHHH
LFRKRLLTEPFGTLNGRNYNCSVDMASWISLLSKGDAIYITEPLSSFRLHTGQQVHHKYL
HHHHHHHHCCCCCCCCCCEEEEECHHHHHHHHHCCCEEEEECCHHHHHHCCCHHHHHHHH
EGCEDFSHLVLHSKKYGFLQEIDYYKTSLLKACEWYKNATTFYQLYPELIPTTDTHTRLS
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHH
HCLNIVTKELHAI
HHHHHHHHHHHCC
>Mature Secondary Structure
MYMEIIKNVPLVSILIPTYNRPHYFKIALESVLAQTYSNIEIIVGDDSTNNETEKLIYRD
CHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHH
YLHKHKHITYIRNPSTLGQFHNALMLLEQSNGEYINFLMDDDIFYNNKIEKMMFYFQKDL
HHHHCCCEEEEECCHHHHHHHHHEEEEECCCCCEEEEEECCCEEECCHHHHHHHHHHHHH
DQNLALITSYRTWINDDGDIIEQHPSMKRLYDEDTLLNGKDLGNRMLILGQNIIGEPTTV
CCCHHHEEHHHHHCCCCCHHHHCCCCHHHHCCCCCCCCCCCCCCEEEEEECCCCCCHHHH
LFRKRLLTEPFGTLNGRNYNCSVDMASWISLLSKGDAIYITEPLSSFRLHTGQQVHHKYL
HHHHHHHHCCCCCCCCCCEEEEECHHHHHHHHHCCCEEEEECCHHHHHHCCCHHHHHHHH
EGCEDFSHLVLHSKKYGFLQEIDYYKTSLLKACEWYKNATTFYQLYPELIPTTDTHTRLS
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHH
HCLNIVTKELHAI
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]