BacMap

Definition	Bacillus cereus E33L, complete genome.
Accession	NC_006274
Length	5,300,915

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The map label for this gene is yhdH [H]

Identifier: 52143917

GI number: 52143917

Start: 1404755

End: 1406113

Strand: Direct

Name: yhdH [H]

Synonym: BCZK1312

Alternate gene names: 52143917

Gene position: 1404755-1406113 (Clockwise)

Preceding gene: 52143919

Following gene: 52143915

Centisome position: 26.5

GC content: 35.47

Gene sequence:

>1359_bases
ATGATGAAAGAAACACAGCAATGGACGTCGAAAATAGGCTTTGTACTCGCAGCAGCCGGAGCCGCAGTAGGTCTTGGTGC
GATATGGAAATTTCCATATGTTGCAGGTAATGGCGGGGGAGGCGCATTCTTCCTTGTATTTTTACTATTAACTTTATTTA
TAGGTATGCCACTTCTTTTGGCCGAATTTGTTATTGGACGTAGTACACAAAAAGAGGCAGTTACAGCTTATAAAGTATTA
GTACCAAATAGTAAAGTATACCCTTGGATTGGTCGTATGGGGGTTGTAACTTGTTTTAGTGTACTATCTTTCTATAGTGT
TGTAGGTGGATGGATTTTACTGTACTTATACTATAGTGTTACAGGAAGCTTTTGGAATGGTGTTGTTGATTATGGAAAAT
TGTTTGGTGAAACGATTTCAAATCCGCTAAGTGCGATTGGAGCACAATTTATCTTTATGCTTTGTACGATTTTTGTTGTA
AGTAAAGGTGTAGAGAAAGGGATAGAAAAAGCAAGTAAGTATATGATGCCGCTATTATTTATTTTATTTATTGCGATCAT
TGTTCGTGCATTAACACTTGATGGTGCTTTTGCAGGAGTAGAGTTCTTTTTAAAACCTGATTTTTCAAAACTAACAGCAG
ATACGGTTTTATACGCGATGGGACAATCTTTCTTCTCGCTCACAGTAGGTGCCTCAGTAATGGTAACGTATAGTTCGTAT
TTGAAGAAAGAAGAACATTTAGCGAAATCAGCAACATCTATTGTAAGTTTAACTGTTTTTATTACAGTACTTGCAGGATT
AGCGATTTTCCCAGCGATTTTCGCATTAGGAGTTAAGCCAACTGAAGGACCAGGACTACTGTTTATCGTACTTCCAGCAG
TGTTTGCGAAAATACCATTTGGGCAATTTTTCTTCATTATGTTTTTAGTTTTATTCTTCTTTGCAACGTTAACATCTGCG
ATTTCCATGCTTGAAATTGTAGTAGCATCTGTTGCGAAAGATAATGAGAAAAAACGTCCGTCAGCATCATTATTAATCGG
TATTCTTATTTTTGCAGTCGGAATTCCGTCAGCATTATCGTTTGGCATTATGAGTGATGTGAAAATATTTGGGAAAACAT
TCTTTGACTTAGTCGATTTCTCAGTAAGTAACGTATTGCTGCCACTAGGAGTACTAGCTATTTCGTTATTTGTACCAAAT
AAAATGAGTAAAGAAATGTTAATGAAAGAATTAGAAGTTACGGAAACGAAAGGAAAAACATTATTTAATATTTGGTTCTT
CTTGCTTCGTTATGTTATTCCAGTAACTGTAATTATTGTATTTTTAAATGCGATAGGCGTATTTAAAATGTTTGCATAA

Upstream 100 bases:

>100_bases
TTGCGTGTAGGGGACTTTTTTATTTTCTAAAGGAGGTGTGCGAGTATGAAATGAAGGTGTATAATTGATAAAAGTTTAAA
TATTCAGAAAAGGGGAATTT

Downstream 100 bases:

>100_bases
TAAAAAGACGGAGAAAGCTCCGTCTTTTTATTATGTGGTAGGTGTATTTAATAAGTGATTATATGCTTTATAAGCTGTGA
TGATTGCAAGGAATAATCCG

Product: sodium-dependent transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 452; Mature: 452

Protein sequence:

>452_residues
MMKETQQWTSKIGFVLAAAGAAVGLGAIWKFPYVAGNGGGGAFFLVFLLLTLFIGMPLLLAEFVIGRSTQKEAVTAYKVL
VPNSKVYPWIGRMGVVTCFSVLSFYSVVGGWILLYLYYSVTGSFWNGVVDYGKLFGETISNPLSAIGAQFIFMLCTIFVV
SKGVEKGIEKASKYMMPLLFILFIAIIVRALTLDGAFAGVEFFLKPDFSKLTADTVLYAMGQSFFSLTVGASVMVTYSSY
LKKEEHLAKSATSIVSLTVFITVLAGLAIFPAIFALGVKPTEGPGLLFIVLPAVFAKIPFGQFFFIMFLVLFFFATLTSA
ISMLEIVVASVAKDNEKKRPSASLLIGILIFAVGIPSALSFGIMSDVKIFGKTFFDLVDFSVSNVLLPLGVLAISLFVPN
KMSKEMLMKELEVTETKGKTLFNIWFFLLRYVIPVTVIIVFLNAIGVFKMFA

Sequences:

>Translated_452_residues
MMKETQQWTSKIGFVLAAAGAAVGLGAIWKFPYVAGNGGGGAFFLVFLLLTLFIGMPLLLAEFVIGRSTQKEAVTAYKVL
VPNSKVYPWIGRMGVVTCFSVLSFYSVVGGWILLYLYYSVTGSFWNGVVDYGKLFGETISNPLSAIGAQFIFMLCTIFVV
SKGVEKGIEKASKYMMPLLFILFIAIIVRALTLDGAFAGVEFFLKPDFSKLTADTVLYAMGQSFFSLTVGASVMVTYSSY
LKKEEHLAKSATSIVSLTVFITVLAGLAIFPAIFALGVKPTEGPGLLFIVLPAVFAKIPFGQFFFIMFLVLFFFATLTSA
ISMLEIVVASVAKDNEKKRPSASLLIGILIFAVGIPSALSFGIMSDVKIFGKTFFDLVDFSVSNVLLPLGVLAISLFVPN
KMSKEMLMKELEVTETKGKTLFNIWFFLLRYVIPVTVIIVFLNAIGVFKMFA
>Mature_452_residues
MMKETQQWTSKIGFVLAAAGAAVGLGAIWKFPYVAGNGGGGAFFLVFLLLTLFIGMPLLLAEFVIGRSTQKEAVTAYKVL
VPNSKVYPWIGRMGVVTCFSVLSFYSVVGGWILLYLYYSVTGSFWNGVVDYGKLFGETISNPLSAIGAQFIFMLCTIFVV
SKGVEKGIEKASKYMMPLLFILFIAIIVRALTLDGAFAGVEFFLKPDFSKLTADTVLYAMGQSFFSLTVGASVMVTYSSY
LKKEEHLAKSATSIVSLTVFITVLAGLAIFPAIFALGVKPTEGPGLLFIVLPAVFAKIPFGQFFFIMFLVLFFFATLTSA
ISMLEIVVASVAKDNEKKRPSASLLIGILIFAVGIPSALSFGIMSDVKIFGKTFFDLVDFSVSNVLLPLGVLAISLFVPN
KMSKEMLMKELEVTETKGKTLFNIWFFLLRYVIPVTVIIVFLNAIGVFKMFA

Specific function: Putative sodium-dependent transporter [H]

COG id: COG0733

COG function: function code R; Na+-dependent transporters of the SNF family

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family [H]

Homologues:

Organism=Homo sapiens, GI171184408, Length=403, Percent_Identity=27.2952853598015, Blast_Score=130, Evalue=2e-30,
Organism=Homo sapiens, GI171184406, Length=403, Percent_Identity=27.2952853598015, Blast_Score=130, Evalue=2e-30,
Organism=Homo sapiens, GI171184404, Length=403, Percent_Identity=27.2952853598015, Blast_Score=130, Evalue=2e-30,
Organism=Homo sapiens, GI4507043, Length=379, Percent_Identity=27.9683377308707, Blast_Score=126, Evalue=4e-29,
Organism=Homo sapiens, GI21361581, Length=406, Percent_Identity=26.8472906403941, Blast_Score=125, Evalue=6e-29,
Organism=Homo sapiens, GI289191351, Length=387, Percent_Identity=26.8733850129199, Blast_Score=122, Evalue=1e-27,
Organism=Homo sapiens, GI4557046, Length=387, Percent_Identity=26.8733850129199, Blast_Score=122, Evalue=1e-27,
Organism=Homo sapiens, GI289191377, Length=387, Percent_Identity=26.8733850129199, Blast_Score=122, Evalue=1e-27,
Organism=Homo sapiens, GI7657587, Length=380, Percent_Identity=25.7894736842105, Blast_Score=115, Evalue=7e-26,
Organism=Homo sapiens, GI4507041, Length=389, Percent_Identity=25.9640102827763, Blast_Score=114, Evalue=2e-25,
Organism=Homo sapiens, GI92859670, Length=445, Percent_Identity=24.9438202247191, Blast_Score=112, Evalue=6e-25,
Organism=Homo sapiens, GI134304856, Length=401, Percent_Identity=26.4339152119701, Blast_Score=108, Evalue=7e-24,
Organism=Homo sapiens, GI188528618, Length=379, Percent_Identity=23.2189973614776, Blast_Score=108, Evalue=1e-23,
Organism=Homo sapiens, GI51468073, Length=296, Percent_Identity=28.7162162162162, Blast_Score=108, Evalue=1e-23,
Organism=Homo sapiens, GI33354281, Length=298, Percent_Identity=27.1812080536913, Blast_Score=106, Evalue=4e-23,
Organism=Homo sapiens, GI197276623, Length=351, Percent_Identity=24.7863247863248, Blast_Score=106, Evalue=4e-23,
Organism=Homo sapiens, GI54607094, Length=351, Percent_Identity=24.7863247863248, Blast_Score=106, Evalue=4e-23,
Organism=Homo sapiens, GI58219014, Length=300, Percent_Identity=27.6666666666667, Blast_Score=106, Evalue=5e-23,
Organism=Homo sapiens, GI67782317, Length=424, Percent_Identity=24.2924528301887, Blast_Score=98, Evalue=2e-20,
Organism=Homo sapiens, GI67782313, Length=424, Percent_Identity=24.2924528301887, Blast_Score=97, Evalue=3e-20,
Organism=Homo sapiens, GI67782315, Length=424, Percent_Identity=24.2924528301887, Blast_Score=97, Evalue=4e-20,
Organism=Homo sapiens, GI194018524, Length=296, Percent_Identity=27.7027027027027, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI11181770, Length=298, Percent_Identity=26.1744966442953, Blast_Score=92, Evalue=1e-18,
Organism=Homo sapiens, GI21361693, Length=117, Percent_Identity=35.042735042735, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI5032097, Length=351, Percent_Identity=24.5014245014245, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI218563756, Length=343, Percent_Identity=25.0728862973761, Blast_Score=79, Evalue=6e-15,
Organism=Homo sapiens, GI12408638, Length=273, Percent_Identity=24.9084249084249, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI197276625, Length=116, Percent_Identity=34.4827586206897, Blast_Score=76, Evalue=6e-14,
Organism=Homo sapiens, GI289191353, Length=213, Percent_Identity=28.169014084507, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI55749589, Length=115, Percent_Identity=29.5652173913043, Blast_Score=68, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI25146584, Length=412, Percent_Identity=25.4854368932039, Blast_Score=120, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI17554804, Length=462, Percent_Identity=24.2424242424242, Blast_Score=110, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI71995588, Length=415, Percent_Identity=22.8915662650602, Blast_Score=92, Evalue=6e-19,
Organism=Caenorhabditis elegans, GI133952791, Length=183, Percent_Identity=28.4153005464481, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17555248, Length=114, Percent_Identity=37.719298245614, Blast_Score=82, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI115534083, Length=433, Percent_Identity=21.9399538106236, Blast_Score=77, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17569475, Length=413, Percent_Identity=20.8232445520581, Blast_Score=69, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17542050, Length=145, Percent_Identity=30.3448275862069, Blast_Score=69, Evalue=6e-12,
Organism=Drosophila melanogaster, GI17136952, Length=437, Percent_Identity=26.3157894736842, Blast_Score=146, Evalue=2e-35,
Organism=Drosophila melanogaster, GI281364394, Length=379, Percent_Identity=26.9129287598945, Blast_Score=144, Evalue=1e-34,
Organism=Drosophila melanogaster, GI28574704, Length=379, Percent_Identity=26.9129287598945, Blast_Score=144, Evalue=1e-34,
Organism=Drosophila melanogaster, GI17136950, Length=379, Percent_Identity=26.9129287598945, Blast_Score=144, Evalue=1e-34,
Organism=Drosophila melanogaster, GI28574702, Length=379, Percent_Identity=26.9129287598945, Blast_Score=144, Evalue=1e-34,
Organism=Drosophila melanogaster, GI24762620, Length=413, Percent_Identity=27.1186440677966, Blast_Score=118, Evalue=7e-27,
Organism=Drosophila melanogaster, GI19921936, Length=403, Percent_Identity=26.5508684863524, Blast_Score=117, Evalue=2e-26,
Organism=Drosophila melanogaster, GI281365034, Length=414, Percent_Identity=26.0869565217391, Blast_Score=116, Evalue=3e-26,
Organism=Drosophila melanogaster, GI24652942, Length=429, Percent_Identity=26.1072261072261, Blast_Score=115, Evalue=5e-26,
Organism=Drosophila melanogaster, GI45551088, Length=429, Percent_Identity=26.1072261072261, Blast_Score=115, Evalue=6e-26,
Organism=Drosophila melanogaster, GI45551183, Length=402, Percent_Identity=24.1293532338308, Blast_Score=110, Evalue=2e-24,
Organism=Drosophila melanogaster, GI45550877, Length=402, Percent_Identity=23.8805970149254, Blast_Score=110, Evalue=2e-24,
Organism=Drosophila melanogaster, GI24582567, Length=397, Percent_Identity=25.9445843828715, Blast_Score=105, Evalue=9e-23,
Organism=Drosophila melanogaster, GI24639514, Length=507, Percent_Identity=24.2603550295858, Blast_Score=104, Evalue=2e-22,
Organism=Drosophila melanogaster, GI221329674, Length=507, Percent_Identity=24.4575936883629, Blast_Score=103, Evalue=2e-22,
Organism=Drosophila melanogaster, GI281363702, Length=378, Percent_Identity=26.1904761904762, Blast_Score=103, Evalue=2e-22,
Organism=Drosophila melanogaster, GI281364136, Length=402, Percent_Identity=24.8756218905473, Blast_Score=97, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24639516, Length=301, Percent_Identity=28.5714285714286, Blast_Score=96, Evalue=4e-20,
Organism=Drosophila melanogaster, GI281363700, Length=337, Percent_Identity=27.299703264095, Blast_Score=96, Evalue=7e-20,
Organism=Drosophila melanogaster, GI24655079, Length=297, Percent_Identity=27.6094276094276, Blast_Score=95, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24639853, Length=516, Percent_Identity=22.4806201550388, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI24654186, Length=232, Percent_Identity=31.4655172413793, Blast_Score=85, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24661428, Length=184, Percent_Identity=33.695652173913, Blast_Score=83, Evalue=4e-16,
Organism=Drosophila melanogaster, GI19921352, Length=219, Percent_Identity=29.6803652968037, Blast_Score=81, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24584353, Length=219, Percent_Identity=29.6803652968037, Blast_Score=81, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24582569, Length=358, Percent_Identity=24.3016759776536, Blast_Score=67, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000175 [H]

Pfam domain/function: PF00209 SNF [H]

EC number: NA

Molecular weight: Translated: 49305; Mature: 49305

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: PS50267 NA_NEUROTRAN_SYMP_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]