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The map label for this gene is fni [H]

Identifier: 52143849

GI number: 52143849

Start: 1472775

End: 1473824

Strand: Direct

Name: fni [H]

Synonym: BCZK1380

Alternate gene names: 52143849

Gene position: 1472775-1473824 (Clockwise)

Preceding gene: 52143850

Following gene: 52143848

Centisome position: 27.78

GC content: 38.76

Gene sequence:

>1050_bases
GTGGTAAGGGCAAAACGTAAATTAGATCATATTGAATACGCTCTTTCTACTGGTCAGTCTCGTACGCATGGCTTTCATGA
TATTGATTTTGTGCATCAAAGCTTGCCAAATTCAAGTTATGAAACAATAACATGTGAAACAAAAATCGGCGAACTTTCAC
TAAGTTCGCCGATTTTTATCAATGCGATGACTGGTGGTGGAGGAGAGAAAACGTTACATATTAATGAGCAATTAGCATAT
GTAGCGAAACATCATAACCTTGCTATGGCTGTAGGATCGCAAATGGCAGCGTTAAAAGATGAAAGTGAGGCTGCCTCTTA
TAAGATTATTAGAAAGGTAAATCCAAATGGTATTTTCTTTGCTAATTTAGGTAGTGAGGCAACTATCGAACAGGCAGAGC
GTGCCGTTGATATGATTGAAGCGAACGCATTACAAATTCATTTAAATGTCATACAAGAGTTAACGATGCCAGAAGGAGAT
CGTGACTTTACTGGTGTGCTTCAGCGTATTGAGAAAATTGTTTTAAATAGTAAAGTTCCTGTCATTGTAAAAGAAGTTGG
ATTTGGGATGAGTAAGGAAACAATGCAACAGTTAGCGAGCGTAGGTGTAACGGCAATTGATATTGGCGGACAAGGTGGTA
CGAATTTTGCTGCTGTTGAAAATGAAAGAAGACAGCGAATGCTTTCTTATTTTAATAACTGGGGCATACAAACAGCTACC
TCGATTATTGAAGCAACCTCTACAAATAATAACCTCTCTTTTATTGCATCTGGGGGTATACAAACAGCGCTTGACGTAGC
GAAAGCAATCGCATTAGGGGCGAATACAACTGCGTTTGCTGGATACTTTTTACGCATTTTAATGGAAGATGGTATCGAGA
AGTTGGTGGACGAAATTGACCTTTTACATACAGATTTGAAATTTATTATGACAGCTCTCGGTGCAAAGACGATAGAAGAG
TTACAGTCCGTACCTCTTGTTATAAAGGGTGAAACGTATCATTGGTTAACGCAGCGTGGAATTGATACGACGCATTATAG
TAGAAGATAA

Upstream 100 bases:

>100_bases
TTACAGTCAGTATGAACCAAATGCTGATTCTGCTACTTTCCAATTAAGTGATATTATTGGTGAACAACTGAAAAAATTAA
AGAAATAAAGAGGGGTACAA

Downstream 100 bases:

>100_bases
AAAATCAACCGTTTGGTTGATTTTTTTGTATTCTATTCGTTTTAGTAATATAAGGTTAGGGATGGAGTTGATATTATATA
AATATTTTATTATCTTTATA

Product: isopentenyl pyrophosphate isomerase

Products: NA

Alternate protein names: IPP isomerase; Isopentenyl pyrophosphate isomerase [H]

Number of amino acids: Translated: 349; Mature: 349

Protein sequence:

>349_residues
MVRAKRKLDHIEYALSTGQSRTHGFHDIDFVHQSLPNSSYETITCETKIGELSLSSPIFINAMTGGGGEKTLHINEQLAY
VAKHHNLAMAVGSQMAALKDESEAASYKIIRKVNPNGIFFANLGSEATIEQAERAVDMIEANALQIHLNVIQELTMPEGD
RDFTGVLQRIEKIVLNSKVPVIVKEVGFGMSKETMQQLASVGVTAIDIGGQGGTNFAAVENERRQRMLSYFNNWGIQTAT
SIIEATSTNNNLSFIASGGIQTALDVAKAIALGANTTAFAGYFLRILMEDGIEKLVDEIDLLHTDLKFIMTALGAKTIEE
LQSVPLVIKGETYHWLTQRGIDTTHYSRR

Sequences:

>Translated_349_residues
MVRAKRKLDHIEYALSTGQSRTHGFHDIDFVHQSLPNSSYETITCETKIGELSLSSPIFINAMTGGGGEKTLHINEQLAY
VAKHHNLAMAVGSQMAALKDESEAASYKIIRKVNPNGIFFANLGSEATIEQAERAVDMIEANALQIHLNVIQELTMPEGD
RDFTGVLQRIEKIVLNSKVPVIVKEVGFGMSKETMQQLASVGVTAIDIGGQGGTNFAAVENERRQRMLSYFNNWGIQTAT
SIIEATSTNNNLSFIASGGIQTALDVAKAIALGANTTAFAGYFLRILMEDGIEKLVDEIDLLHTDLKFIMTALGAKTIEE
LQSVPLVIKGETYHWLTQRGIDTTHYSRR
>Mature_349_residues
MVRAKRKLDHIEYALSTGQSRTHGFHDIDFVHQSLPNSSYETITCETKIGELSLSSPIFINAMTGGGGEKTLHINEQLAY
VAKHHNLAMAVGSQMAALKDESEAASYKIIRKVNPNGIFFANLGSEATIEQAERAVDMIEANALQIHLNVIQELTMPEGD
RDFTGVLQRIEKIVLNSKVPVIVKEVGFGMSKETMQQLASVGVTAIDIGGQGGTNFAAVENERRQRMLSYFNNWGIQTAT
SIIEATSTNNNLSFIASGGIQTALDVAKAIALGANTTAFAGYFLRILMEDGIEKLVDEIDLLHTDLKFIMTALGAKTIEE
LQSVPLVIKGETYHWLTQRGIDTTHYSRR

Specific function: Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP) [H]

COG id: COG1304

COG function: function code C; L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IPP isomerase type 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000262
- InterPro:   IPR011179 [H]

Pfam domain/function: PF01070 FMN_dh [H]

EC number: =5.3.3.2 [H]

Molecular weight: Translated: 38272; Mature: 38272

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRAKRKLDHIEYALSTGQSRTHGFHDIDFVHQSLPNSSYETITCETKIGELSLSSPIFI
CCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEEECCEECCCCEEE
NAMTGGGGEKTLHINEQLAYVAKHHNLAMAVGSQMAALKDESEAASYKIIRKVNPNGIFF
EEEECCCCCEEEEECHHHHHHHHHCCHHHHHCCHHHHHCCCHHHHHEEEEEEECCCEEEE
ANLGSEATIEQAERAVDMIEANALQIHLNVIQELTMPEGDRDFTGVLQRIEKIVLNSKVP
EECCCCHHHHHHHHHHHHHHCCCEEEEHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCC
VIVKEVGFGMSKETMQQLASVGVTAIDIGGQGGTNFAAVENERRQRMLSYFNNWGIQTAT
EEEHHHCCCCCHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHH
SIIEATSTNNNLSFIASGGIQTALDVAKAIALGANTTAFAGYFLRILMEDGIEKLVDEID
HHHHHCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LLHTDLKFIMTALGAKTIEELQSVPLVIKGETYHWLTQRGIDTTHYSRR
HHHHHHHHHHHHHCHHHHHHHHHCCEEEECCCEEEHHHCCCCCCCCCCC
>Mature Secondary Structure
MVRAKRKLDHIEYALSTGQSRTHGFHDIDFVHQSLPNSSYETITCETKIGELSLSSPIFI
CCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEEECCEECCCCEEE
NAMTGGGGEKTLHINEQLAYVAKHHNLAMAVGSQMAALKDESEAASYKIIRKVNPNGIFF
EEEECCCCCEEEEECHHHHHHHHHCCHHHHHCCHHHHHCCCHHHHHEEEEEEECCCEEEE
ANLGSEATIEQAERAVDMIEANALQIHLNVIQELTMPEGDRDFTGVLQRIEKIVLNSKVP
EECCCCHHHHHHHHHHHHHHCCCEEEEHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCC
VIVKEVGFGMSKETMQQLASVGVTAIDIGGQGGTNFAAVENERRQRMLSYFNNWGIQTAT
EEEHHHCCCCCHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHH
SIIEATSTNNNLSFIASGGIQTALDVAKAIALGANTTAFAGYFLRILMEDGIEKLVDEID
HHHHHCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LLHTDLKFIMTALGAKTIEELQSVPLVIKGETYHWLTQRGIDTTHYSRR
HHHHHHHHHHHHHCHHHHHHHHHCCEEEECCCEEEHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA