Click here to switch to the map view.

The map label for this gene is yjcC [H]

Identifier: 52143842

GI number: 52143842

Start: 1478654

End: 1478914

Strand: Direct

Name: yjcC [H]

Synonym: BCZK1388

Alternate gene names: 52143842

Gene position: 1478654-1478914 (Clockwise)

Preceding gene: 52143843

Following gene: 52143840

Centisome position: 27.89

GC content: 32.18

Gene sequence:

>261_bases
GTGAAAAGAATGGATAACAACATTTTTAATAACATTGAAAAAGAAGCGAAAGTGAATAAAGAAGATATTTTTAAATTAGC
ATCATCGGTACAAAATGCGAATTTACGTGATGAGACTGTGCTTCGTCAATTGATTCATCAAGTGGCTCTTATGGCAGGAC
GTGAAGTGCCGAAAGAACAAGAGGATCAAATTGTTAAAGCAATTATTAACAATAATATGCCAGCAGATTTTGGCTCGTTA
AGCAAAATGTTTAAAAAATAA

Upstream 100 bases:

>100_bases
GCGACAGAAGTACATTTGTACTTCTGTCGCTTTTTATTTTTTTGGGTCTTTTCACCATTTTTTTATTTTTGCATAGGATG
AAGAGTAACTTGAGGAGAGG

Downstream 100 bases:

>100_bases
AATATGAGAAACAAAGAGTTTGTAGAGTGCATATGATAGCCATGAAAGTATGGGAATAGAGCTGTTTTGGGCATATTTGG
TCAACCGAAGCGAGAGATAT

Product: hypothetical protein

Products: NA

Alternate protein names: Stage VI sporulation protein F [H]

Number of amino acids: Translated: 86; Mature: 86

Protein sequence:

>86_residues
MKRMDNNIFNNIEKEAKVNKEDIFKLASSVQNANLRDETVLRQLIHQVALMAGREVPKEQEDQIVKAIINNNMPADFGSL
SKMFKK

Sequences:

>Translated_86_residues
MKRMDNNIFNNIEKEAKVNKEDIFKLASSVQNANLRDETVLRQLIHQVALMAGREVPKEQEDQIVKAIINNNMPADFGSL
SKMFKK
>Mature_86_residues
MKRMDNNIFNNIEKEAKVNKEDIFKLASSVQNANLRDETVLRQLIHQVALMAGREVPKEQEDQIVKAIINNNMPADFGSL
SKMFKK

Specific function: Transcription factor involved in spore coat assembly and spore resistance. Regulates the transcription of at least cgeA, cotG and cotS [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9889; Mature: 9889

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRMDNNIFNNIEKEAKVNKEDIFKLASSVQNANLRDETVLRQLIHQVALMAGREVPKEQ
CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHH
EDQIVKAIINNNMPADFGSLSKMFKK
HHHHHHHHHHCCCCCCHHHHHHHHCC
>Mature Secondary Structure
MKRMDNNIFNNIEKEAKVNKEDIFKLASSVQNANLRDETVLRQLIHQVALMAGREVPKEQ
CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHH
EDQIVKAIINNNMPADFGSLSKMFKK
HHHHHHHHHHCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]