| Definition | Bacillus cereus E33L, complete genome. |
|---|---|
| Accession | NC_006274 |
| Length | 5,300,915 |
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The map label for this gene is dinG [H]
Identifier: 52143806
GI number: 52143806
Start: 1508920
End: 1511724
Strand: Direct
Name: dinG [H]
Synonym: BCZK1425
Alternate gene names: 52143806
Gene position: 1508920-1511724 (Clockwise)
Preceding gene: 52143807
Following gene: 52143805
Centisome position: 28.47
GC content: 35.61
Gene sequence:
>2805_bases ATGAGTAAGCGTTATGTCGTTGTGGATTTAGAGACGACAGGGAACTCCTGGAAGGATGGGAAAGATAAAATTACCCAAAT TGCAGCTGTTGTAGTGGAAGATGGAGAGATATTAGAGATTTTTTCATCTTTTATTAATCCGAAGAGAGAGATTCCTCCAT TTATTACAGAGTTAACAGGGATTGATGAGAGTATGGTTAAGCAAGCCCCGTTATTTCAAGATGTAGCCCCGATGGTTGTT GAGCTATTACAAGGTGCAGCTTTCGTTGCACACAACGTTCACTTTGATTGGAATTTTTTAACGGAAGAATTAAGGCAGGC TGGATATACAGAAATACATTGCCCAAAAGTTGATACAGTTGAGTTGGCGCAAATTCTTTTGCCAACGGCTGATAGTTATA AATTACGTGATTTAGCTAAACAACACGAACTAGAGCACGATCAACCGCATCGTGCGGATAGTGATGCTCTTGCTACAGCG GAATTATTTTTACAATTTTTAAATGAAATTGAAAAGTTACCACTTGTTACTTTGCAATCGCTTTATGAATTGAGCGATGT TTTTCAAAGTGATATTGCGGATGTGCTTTCTGAAAATATTTTAAAGAAAATGATGCATGGCAAAAAAGTGGCAGAGGAGT ATGAAGTGTATCGAAATATTGCGCTTCGAAAACGAAATTATTCTTTAAATCTCAGTGAAACATGTTCCTCTAAATTTGAT GCTTTTTTGCATAAGACAATTGATAAACTTGCATTGAATATGCCAAAGTTTGAAAAAAGAGAAAGCCAACAAATTATGAT GAAGGAAATATATACAGCACTAAGAGATTCTAGGTTTTCCTTAATCGAAGCAGGAACAGGTACAGGGAAGACTCTTGCGT ATTTGCTTCCAAGTATTTATTTTGCAAAGAAAAAAGAAGAACCTGTCATCATAAGTACCCAAACCGTACAACTGCAACAA CAAATACTAGAAAAAGAAATTCCATTATTACAGAAAATAATGCCATTTTCATTTGAAGTAGCTCTTTTGAAAGGAAGAAA GCATTATCTTTGCCTACATAAATTTGAATATGCTTTGCAAGAGGAAGAGAAAAATTATGATATGGCGCTCACAAAGGCAA AAATTTTAGTATGGTTATTGCAAACGGAAACTGGCGATCGAGATGAATTAAATATCCCTGAGGGCGGAAAGTTACTTTGG AACCGTATTTGTAGTGATGTACATAGTCCGGGCGGGATGCAAAGTAACTGGTTTAGTCGTTGTTTTTATCAACGGGCAAA GAATAAAGCGTTATTTGCAGATATCGTTATTACAAATCATGCGTTATTATTTCAAGATTTTTCAAGTGAAGAACCATTGT TTGCTTCATGTGAACATATTATTTTTGATGAAGCTCATCATATTGAGGAAGCGGCAAGTAGAACATTAGGTGAACAGTTC TCCTGTATGTATTTCCAGTTAGTCTTATCTCGCCTTGGTACGCTAGAAACAGATGATGTACTTTCTAAAGTATATAAAAT GATGAAAAAATCAGAACAAGCCTCTCGTTCGACTTTCCGGATGGTGAGTCATAGTTTGAAGGAATTGAAATTTGATGCGG ATGAGCTATTCCAAATGTTACGTGCGTTCATCTTTAAACAAACAAAGCAGGAACAAGGGATAAGCAATATGCCACTCATT TATCGATATAACACAGAAGTAGAGAAAGGTAAGTTATGGGATAGCATTACCGAGTTAACAAATCGTTTTGTATATGATAT AAGAAAATTATTGACTACACTTGAGAAGCAAGTTGATATATTGCAAAGTAAAATAGAATGGGAAATGCATGTTGTTACTG GTGAATTTATGCATTTAATTGAGTTATTGAGAAAGATGGCACAAGCTTTACAATTGCTCATTTTAGAAAAAAATTCATAT GTGACATGGATGGAGACTGAAACGAAGGGAACCATTCATTCAACTGTTTTATATGGACAACCTGTTCATATTGCTGAAAG GTTTGCTGATGAATTTTTAACAGAGAAAAAGAGTGTTATTTTCACATCAGCAACGCTGACAGTAAACGATTCATTTGCCT ATATAAAAGAAGAGCTAGGTTTACATGATTTTGCTCCTAATACATTACAGGTTCCGTCACCATTCCGTTTTGAAGAACAG ATGAAATTAATGGTTTCAACGGATGTGCCTTTTATTAAGAAAGCAAGTAATGAAGAATATATTGAATCTGTGTCGACACA TATTGCAAAAATAGCGAAAGCTACAAAAGGTAGAATGCTCGTTTTATTCACCTCGTATGAAATGTTGAAAGAAGCGTATA CGAATTTAAAAAATGACGAGGAATTAGAAGGGTATTTATTATTAACACAAAGTGTGAATAATAAGAGCCGAAGTCGTCTT ATTCGTAAGTTTCAAGAGTTCGACAAATCAATTTTGTTAGGAACAAGTAGTTTTTGGGAAGGAATCGATATACCTGGAGA TGCACTTAGTTGTCTTGTTATTGTCCGGCTTCCCTTTACGCCTCCTTATCAACCGATGATAGAAGCAAAAGGAGAGTGGT TAAAAAATCAAGGTGAGGACGTATTTGCTAAGTTAGCACTTCCGCAAGCAATACTGCGTTTCAAACAAGGATTTGGTCGT CTCATTAGAACAAGTACAGATACCGGAACAGTATTTGTATTAGACCGTCGTTTGACAAGCTCTTCCTATGGAAAATATTT TTTACAATCAATTCCAACTGTCCCGCTCTATGAAGGTCCTTTAGAAGAATTGTTAGAACAAGTAAAGGAACGGCCAACTG AATAA
Upstream 100 bases:
>100_bases AGCTTTTTTGTGCATCTTTTCATTAAGATGAGATAAAACGTGGTATAGTAACATTATATAATTTTCTGTTTGATAGGTAA GAAATTGAGGTGTTACATAT
Downstream 100 bases:
>100_bases AATTGGAAGAAAAATACGCCTGAAGTACATTTAATCTTCAGGCGTAAAAAATGTGGGTAGGAGGAATTTTATTTTTCTTA CTTCTTGTATACAAAATGTC
Product: bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 934; Mature: 933
Protein sequence:
>934_residues MSKRYVVVDLETTGNSWKDGKDKITQIAAVVVEDGEILEIFSSFINPKREIPPFITELTGIDESMVKQAPLFQDVAPMVV ELLQGAAFVAHNVHFDWNFLTEELRQAGYTEIHCPKVDTVELAQILLPTADSYKLRDLAKQHELEHDQPHRADSDALATA ELFLQFLNEIEKLPLVTLQSLYELSDVFQSDIADVLSENILKKMMHGKKVAEEYEVYRNIALRKRNYSLNLSETCSSKFD AFLHKTIDKLALNMPKFEKRESQQIMMKEIYTALRDSRFSLIEAGTGTGKTLAYLLPSIYFAKKKEEPVIISTQTVQLQQ QILEKEIPLLQKIMPFSFEVALLKGRKHYLCLHKFEYALQEEEKNYDMALTKAKILVWLLQTETGDRDELNIPEGGKLLW NRICSDVHSPGGMQSNWFSRCFYQRAKNKALFADIVITNHALLFQDFSSEEPLFASCEHIIFDEAHHIEEAASRTLGEQF SCMYFQLVLSRLGTLETDDVLSKVYKMMKKSEQASRSTFRMVSHSLKELKFDADELFQMLRAFIFKQTKQEQGISNMPLI YRYNTEVEKGKLWDSITELTNRFVYDIRKLLTTLEKQVDILQSKIEWEMHVVTGEFMHLIELLRKMAQALQLLILEKNSY VTWMETETKGTIHSTVLYGQPVHIAERFADEFLTEKKSVIFTSATLTVNDSFAYIKEELGLHDFAPNTLQVPSPFRFEEQ MKLMVSTDVPFIKKASNEEYIESVSTHIAKIAKATKGRMLVLFTSYEMLKEAYTNLKNDEELEGYLLLTQSVNNKSRSRL IRKFQEFDKSILLGTSSFWEGIDIPGDALSCLVIVRLPFTPPYQPMIEAKGEWLKNQGEDVFAKLALPQAILRFKQGFGR LIRTSTDTGTVFVLDRRLTSSSYGKYFLQSIPTVPLYEGPLEELLEQVKERPTE
Sequences:
>Translated_934_residues MSKRYVVVDLETTGNSWKDGKDKITQIAAVVVEDGEILEIFSSFINPKREIPPFITELTGIDESMVKQAPLFQDVAPMVV ELLQGAAFVAHNVHFDWNFLTEELRQAGYTEIHCPKVDTVELAQILLPTADSYKLRDLAKQHELEHDQPHRADSDALATA ELFLQFLNEIEKLPLVTLQSLYELSDVFQSDIADVLSENILKKMMHGKKVAEEYEVYRNIALRKRNYSLNLSETCSSKFD AFLHKTIDKLALNMPKFEKRESQQIMMKEIYTALRDSRFSLIEAGTGTGKTLAYLLPSIYFAKKKEEPVIISTQTVQLQQ QILEKEIPLLQKIMPFSFEVALLKGRKHYLCLHKFEYALQEEEKNYDMALTKAKILVWLLQTETGDRDELNIPEGGKLLW NRICSDVHSPGGMQSNWFSRCFYQRAKNKALFADIVITNHALLFQDFSSEEPLFASCEHIIFDEAHHIEEAASRTLGEQF SCMYFQLVLSRLGTLETDDVLSKVYKMMKKSEQASRSTFRMVSHSLKELKFDADELFQMLRAFIFKQTKQEQGISNMPLI YRYNTEVEKGKLWDSITELTNRFVYDIRKLLTTLEKQVDILQSKIEWEMHVVTGEFMHLIELLRKMAQALQLLILEKNSY VTWMETETKGTIHSTVLYGQPVHIAERFADEFLTEKKSVIFTSATLTVNDSFAYIKEELGLHDFAPNTLQVPSPFRFEEQ MKLMVSTDVPFIKKASNEEYIESVSTHIAKIAKATKGRMLVLFTSYEMLKEAYTNLKNDEELEGYLLLTQSVNNKSRSRL IRKFQEFDKSILLGTSSFWEGIDIPGDALSCLVIVRLPFTPPYQPMIEAKGEWLKNQGEDVFAKLALPQAILRFKQGFGR LIRTSTDTGTVFVLDRRLTSSSYGKYFLQSIPTVPLYEGPLEELLEQVKERPTE >Mature_933_residues SKRYVVVDLETTGNSWKDGKDKITQIAAVVVEDGEILEIFSSFINPKREIPPFITELTGIDESMVKQAPLFQDVAPMVVE LLQGAAFVAHNVHFDWNFLTEELRQAGYTEIHCPKVDTVELAQILLPTADSYKLRDLAKQHELEHDQPHRADSDALATAE LFLQFLNEIEKLPLVTLQSLYELSDVFQSDIADVLSENILKKMMHGKKVAEEYEVYRNIALRKRNYSLNLSETCSSKFDA FLHKTIDKLALNMPKFEKRESQQIMMKEIYTALRDSRFSLIEAGTGTGKTLAYLLPSIYFAKKKEEPVIISTQTVQLQQQ ILEKEIPLLQKIMPFSFEVALLKGRKHYLCLHKFEYALQEEEKNYDMALTKAKILVWLLQTETGDRDELNIPEGGKLLWN RICSDVHSPGGMQSNWFSRCFYQRAKNKALFADIVITNHALLFQDFSSEEPLFASCEHIIFDEAHHIEEAASRTLGEQFS CMYFQLVLSRLGTLETDDVLSKVYKMMKKSEQASRSTFRMVSHSLKELKFDADELFQMLRAFIFKQTKQEQGISNMPLIY RYNTEVEKGKLWDSITELTNRFVYDIRKLLTTLEKQVDILQSKIEWEMHVVTGEFMHLIELLRKMAQALQLLILEKNSYV TWMETETKGTIHSTVLYGQPVHIAERFADEFLTEKKSVIFTSATLTVNDSFAYIKEELGLHDFAPNTLQVPSPFRFEEQM KLMVSTDVPFIKKASNEEYIESVSTHIAKIAKATKGRMLVLFTSYEMLKEAYTNLKNDEELEGYLLLTQSVNNKSRSRLI RKFQEFDKSILLGTSSFWEGIDIPGDALSCLVIVRLPFTPPYQPMIEAKGEWLKNQGEDVFAKLALPQAILRFKQGFGRL IRTSTDTGTVFVLDRRLTSSSYGKYFLQSIPTVPLYEGPLEELLEQVKERPTE
Specific function: Probable helicase involved in DNA repair and perhaps also replication [H]
COG id: COG1199
COG function: function code KL; Rad3-related DNA helicases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1788110, Length=677, Percent_Identity=30.1329394387001, Blast_Score=262, Evalue=8e-71, Organism=Escherichia coli, GI1787018, Length=729, Percent_Identity=26.4746227709191, Blast_Score=181, Evalue=2e-46,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR006054 - InterPro: IPR006310 - InterPro: IPR006055 - InterPro: IPR013520 - InterPro: IPR014013 - InterPro: IPR006555 - InterPro: IPR001650 - InterPro: IPR006935 - InterPro: IPR012337 [H]
Pfam domain/function: PF00929 Exonuc_X-T; PF04851 ResIII [H]
EC number: =3.6.4.12 [H]
Molecular weight: Translated: 107557; Mature: 107426
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKRYVVVDLETTGNSWKDGKDKITQIAAVVVEDGEILEIFSSFINPKREIPPFITELTG CCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHC IDESMVKQAPLFQDVAPMVVELLQGAAFVAHNVHFDWNFLTEELRQAGYTEIHCPKVDTV CCHHHHHHCCCHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHCCCCEEECCCCCHH ELAQILLPTADSYKLRDLAKQHELEHDQPHRADSDALATAELFLQFLNEIEKLPLVTLQS HHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHH LYELSDVFQSDIADVLSENILKKMMHGKKVAEEYEVYRNIALRKRNYSLNLSETCSSKFD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH AFLHKTIDKLALNMPKFEKRESQQIMMKEIYTALRDSRFSLIEAGTGTGKTLAYLLPSIY HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHEEECCCCCCHHHHHHHHHHH FAKKKEEPVIISTQTVQLQQQILEKEIPLLQKIMPFSFEVALLKGRKHYLCLHKFEYALQ HHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEHEECCCCCEEHHHHHHHHHH EEEKNYDMALTKAKILVWLLQTETGDRDELNIPEGGKLLWNRICSDVHSPGGMQSNWFSR HHCCCCCHHHHHHHHHEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHH CFYQRAKNKALFADIVITNHALLFQDFSSEEPLFASCEHIIFDEAHHIEEAASRTLGEQF HHHHHHCCCEEEEEHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SCMYFQLVLSRLGTLETDDVLSKVYKMMKKSEQASRSTFRMVSHSLKELKFDADELFQML HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH RAFIFKQTKQEQGISNMPLIYRYNTEVEKGKLWDSITELTNRFVYDIRKLLTTLEKQVDI HHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LQSKIEWEMHVVTGEFMHLIELLRKMAQALQLLILEKNSYVTWMETETKGTIHSTVLYGQ HHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEECCCCCCEEHEEEECC PVHIAERFADEFLTEKKSVIFTSATLTVNDSFAYIKEELGLHDFAPNTLQVPSPFRFEEQ CHHHHHHHHHHHHHCCCCEEEEEEEEEECCHHHHHHHHCCCCCCCCCCEECCCCCCHHHH MKLMVSTDVPFIKKASNEEYIESVSTHIAKIAKATKGRMLVLFTSYEMLKEAYTNLKNDE HHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCCC ELEGYLLLTQSVNNKSRSRLIRKFQEFDKSILLGTSSFWEGIDIPGDALSCLVIVRLPFT CCCCEEEEEECCCCHHHHHHHHHHHHHCHHEEECCHHHCCCCCCCCHHHHEEEEEECCCC PPYQPMIEAKGEWLKNQGEDVFAKLALPQAILRFKQGFGRLIRTSTDTGTVFVLDRRLTS CCCCHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCC SSYGKYFLQSIPTVPLYEGPLEELLEQVKERPTE CHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCC >Mature Secondary Structure SKRYVVVDLETTGNSWKDGKDKITQIAAVVVEDGEILEIFSSFINPKREIPPFITELTG CCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHC IDESMVKQAPLFQDVAPMVVELLQGAAFVAHNVHFDWNFLTEELRQAGYTEIHCPKVDTV CCHHHHHHCCCHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHCCCCEEECCCCCHH ELAQILLPTADSYKLRDLAKQHELEHDQPHRADSDALATAELFLQFLNEIEKLPLVTLQS HHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHH LYELSDVFQSDIADVLSENILKKMMHGKKVAEEYEVYRNIALRKRNYSLNLSETCSSKFD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH AFLHKTIDKLALNMPKFEKRESQQIMMKEIYTALRDSRFSLIEAGTGTGKTLAYLLPSIY HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHEEECCCCCCHHHHHHHHHHH FAKKKEEPVIISTQTVQLQQQILEKEIPLLQKIMPFSFEVALLKGRKHYLCLHKFEYALQ HHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEHEECCCCCEEHHHHHHHHHH EEEKNYDMALTKAKILVWLLQTETGDRDELNIPEGGKLLWNRICSDVHSPGGMQSNWFSR HHCCCCCHHHHHHHHHEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHH CFYQRAKNKALFADIVITNHALLFQDFSSEEPLFASCEHIIFDEAHHIEEAASRTLGEQF HHHHHHCCCEEEEEHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SCMYFQLVLSRLGTLETDDVLSKVYKMMKKSEQASRSTFRMVSHSLKELKFDADELFQML HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH RAFIFKQTKQEQGISNMPLIYRYNTEVEKGKLWDSITELTNRFVYDIRKLLTTLEKQVDI HHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LQSKIEWEMHVVTGEFMHLIELLRKMAQALQLLILEKNSYVTWMETETKGTIHSTVLYGQ HHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEECCCCCCEEHEEEECC PVHIAERFADEFLTEKKSVIFTSATLTVNDSFAYIKEELGLHDFAPNTLQVPSPFRFEEQ CHHHHHHHHHHHHHCCCCEEEEEEEEEECCHHHHHHHHCCCCCCCCCCEECCCCCCHHHH MKLMVSTDVPFIKKASNEEYIESVSTHIAKIAKATKGRMLVLFTSYEMLKEAYTNLKNDE HHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCCC ELEGYLLLTQSVNNKSRSRLIRKFQEFDKSILLGTSSFWEGIDIPGDALSCLVIVRLPFT CCCCEEEEEECCCCHHHHHHHHHHHHHCHHEEECCHHHCCCCCCCCHHHHEEEEEECCCC PPYQPMIEAKGEWLKNQGEDVFAKLALPQAILRFKQGFGRLIRTSTDTGTVFVLDRRLTS CCCCHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCC SSYGKYFLQSIPTVPLYEGPLEELLEQVKERPTE CHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8760912; 9384377 [H]