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The map label for this gene is ypeP [H]

Identifier: 52143759

GI number: 52143759

Start: 1567970

End: 1568629

Strand: Direct

Name: ypeP [H]

Synonym: BCZK1472

Alternate gene names: 52143759

Gene position: 1567970-1568629 (Clockwise)

Preceding gene: 52143758

Following gene: 52143762

Centisome position: 29.58

GC content: 34.39

Gene sequence:

>660_bases
ATGAAATATAAAATTCATTGGTTGTATAAAACAAAGCGCGGTTTGCAGACGGAATTAATGACAGATTATATGAACATAGA
AGAAGCACTTCAATTTGCGGAGGATTTCGAGAAAACAGGAAGAGTAAAGGAATTATTATTTTACGATGAAATGGATACAG
AATGGTTATTAAAGGAAATGAAAAAGCTGAGTAAACAAGTGGAGGAAGAACCCCAAGAAATACTCGTTTATTTTGATGGT
GGTTATGATGTACAGACGAAAGAAGCTGGGATAGGTATATGTGTATACTATAAAAAAGGAAATGCAAAATACCGAATTCG
CCGTAATGCATATATAGAAGGCATATATGATAATAATGAAGCGGAATACGCATCATTACTATATAGCATGAATATACTCG
AGGAATTAGGGATTAAGTATGAAGCAGTTACACTTCGCGGGGATTCTCAAGTTGTACTGCAACAATTGGCCGGGGAATGG
CCTTGTTATGACGAACATTTAAATCATTATTTAGACCAAATTGAGCAAAAAGCAAAGCAAATGAAATTAAAACTTGTATG
TGAGCCAATCTCTAGAAAACAAAATAAAGAAGCACATCAATTGGCAACGCAAGCATTAGAAGGAACAGTCATTGATAGTC
ATAAAGAAATAACCGAATAG

Upstream 100 bases:

>100_bases
TTGAATATAATTCTGTGACTCTTGATAAAATATAATAAAATAAAGTGAGGCTTTCATTAGCTGGATACATATAAGAAGTC
TTACATAAGGGGAATCTAGT

Downstream 100 bases:

>100_bases
AGAGGTGCAACGGTGGATAAAAAGCAACTCATTACAGAGGTAAATGACTTATTAGAAACGTATTGTGAAGGATGTTTTTT
GCGAGAACATAATCGAAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MKYKIHWLYKTKRGLQTELMTDYMNIEEALQFAEDFEKTGRVKELLFYDEMDTEWLLKEMKKLSKQVEEEPQEILVYFDG
GYDVQTKEAGIGICVYYKKGNAKYRIRRNAYIEGIYDNNEAEYASLLYSMNILEELGIKYEAVTLRGDSQVVLQQLAGEW
PCYDEHLNHYLDQIEQKAKQMKLKLVCEPISRKQNKEAHQLATQALEGTVIDSHKEITE

Sequences:

>Translated_219_residues
MKYKIHWLYKTKRGLQTELMTDYMNIEEALQFAEDFEKTGRVKELLFYDEMDTEWLLKEMKKLSKQVEEEPQEILVYFDG
GYDVQTKEAGIGICVYYKKGNAKYRIRRNAYIEGIYDNNEAEYASLLYSMNILEELGIKYEAVTLRGDSQVVLQQLAGEW
PCYDEHLNHYLDQIEQKAKQMKLKLVCEPISRKQNKEAHQLATQALEGTVIDSHKEITE
>Mature_219_residues
MKYKIHWLYKTKRGLQTELMTDYMNIEEALQFAEDFEKTGRVKELLFYDEMDTEWLLKEMKKLSKQVEEEPQEILVYFDG
GYDVQTKEAGIGICVYYKKGNAKYRIRRNAYIEGIYDNNEAEYASLLYSMNILEELGIKYEAVTLRGDSQVVLQQLAGEW
PCYDEHLNHYLDQIEQKAKQMKLKLVCEPISRKQNKEAHQLATQALEGTVIDSHKEITE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 RNase H domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012337
- InterPro:   IPR002156 [H]

Pfam domain/function: PF00075 RnaseH [H]

EC number: 3.1.26.4

Molecular weight: Translated: 25803; Mature: 25803

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: PS50879 RNASE_H

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYKIHWLYKTKRGLQTELMTDYMNIEEALQFAEDFEKTGRVKELLFYDEMDTEWLLKEM
CCEEEEEEEECCCCHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHH
KKLSKQVEEEPQEILVYFDGGYDVQTKEAGIGICVYYKKGNAKYRIRRNAYIEGIYDNNE
HHHHHHHHCCCCCEEEEECCCEEEEECCCCEEEEEEEECCCCEEEEEECCEEEEEECCCH
AEYASLLYSMNILEELGIKYEAVTLRGDSQVVLQQLAGEWPCYDEHLNHYLDQIEQKAKQ
HHHHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
MKLKLVCEPISRKQNKEAHQLATQALEGTVIDSHKEITE
HHHHHEECHHHHCCCHHHHHHHHHHHCCCEECCCHHCCC
>Mature Secondary Structure
MKYKIHWLYKTKRGLQTELMTDYMNIEEALQFAEDFEKTGRVKELLFYDEMDTEWLLKEM
CCEEEEEEEECCCCHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHH
KKLSKQVEEEPQEILVYFDGGYDVQTKEAGIGICVYYKKGNAKYRIRRNAYIEGIYDNNE
HHHHHHHHCCCCCEEEEECCCEEEEECCCCEEEEEEEECCCCEEEEEECCEEEEEECCCH
AEYASLLYSMNILEELGIKYEAVTLRGDSQVVLQQLAGEWPCYDEHLNHYLDQIEQKAKQ
HHHHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
MKLKLVCEPISRKQNKEAHQLATQALEGTVIDSHKEITE
HHHHHEECHHHHCCCHHHHHHHHHHHCCCEECCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]