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The map label for this gene is sigW

Identifier: 52143741

GI number: 52143741

Start: 1585634

End: 1586173

Strand: Direct

Name: sigW

Synonym: BCZK1493

Alternate gene names: NA

Gene position: 1585634-1586173 (Clockwise)

Preceding gene: 52143742

Following gene: 52143739

Centisome position: 29.91

GC content: 28.7

Gene sequence:

>540_bases
ATGATTTTCAATTCTGAAGAGGATTTAATTATAGCTATGAAAAAACGCGATCAAGATGCTTTGAAAGAAGTGATTGATCA
ATATGGAAAATTAATTTTGTACATTATTCATAAATCATTAAGTACCCCTATGGAGAAACAATATGTGGATGATTGTTATA
ACGATGTATTTACTGTCATTTGGTTTCATATCGATCAATTTGATATAGACAAGGGGAACTTAAAATCTTGGATGATTGGT
ATTACTAAATTAAAGGCACTGGAATATAAAAAGAAAGTATATAAAGAGAATAAAATCGATAAAGATGTAGAAATAAATAC
AGGTGTCCATGATAGGTATGAAATAGAACAAGAAGAAGAGATTATGGGAATAGTTCAAGATTTAAATAAGAAAGATCGAT
ATATTTTTTTAAAGAGGTATATTGATGGATATTCCATTGATGATATTGCGAAAGAATTAAAAGTAACGGTGGATTACATA
TACAATCGAATTTCTCGCGGGAAGAAAAAAATTCAAAAACTGTGGAAAGGGAGTGTGTAA

Upstream 100 bases:

>100_bases
AAAATTAATAATTTTTTACAAAAGTGATAGAAAATGAGAATGAAATGCCAATAGTAAGTAAAGGCAGCTGCTAAAGGGGA
ATTGAGGAAGGAAGATGCTT

Downstream 100 bases:

>100_bases
TATGGATAAAAGATTATTATCTATGTTAAATGAACTCCAATATTCAGAGGAAGAGATTACACGTTTAGAGAAAGAAGCAA
ATGAGTCTATCAATATAGAT

Product: RNA polymerase factor sigma-70

Products: NA

Alternate protein names: RNA Polymerase Sigma-24 Subunit ECF Subfamily; RNA Polymerase Sigma Factor; ECF Subfamily RNA Polymerase Sigma-24 Factor; RNA Polymerase Sigma-70 Factor; RNA Polymerase; RNA Polymerase Sigma-70 Factor Family; RNA Polymerase Sigma-70 Factor ECF Subfamily; RNA Polymerase Sigma-70factor

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MIFNSEEDLIIAMKKRDQDALKEVIDQYGKLILYIIHKSLSTPMEKQYVDDCYNDVFTVIWFHIDQFDIDKGNLKSWMIG
ITKLKALEYKKKVYKENKIDKDVEINTGVHDRYEIEQEEEIMGIVQDLNKKDRYIFLKRYIDGYSIDDIAKELKVTVDYI
YNRISRGKKKIQKLWKGSV

Sequences:

>Translated_179_residues
MIFNSEEDLIIAMKKRDQDALKEVIDQYGKLILYIIHKSLSTPMEKQYVDDCYNDVFTVIWFHIDQFDIDKGNLKSWMIG
ITKLKALEYKKKVYKENKIDKDVEINTGVHDRYEIEQEEEIMGIVQDLNKKDRYIFLKRYIDGYSIDDIAKELKVTVDYI
YNRISRGKKKIQKLWKGSV
>Mature_179_residues
MIFNSEEDLIIAMKKRDQDALKEVIDQYGKLILYIIHKSLSTPMEKQYVDDCYNDVFTVIWFHIDQFDIDKGNLKSWMIG
ITKLKALEYKKKVYKENKIDKDVEINTGVHDRYEIEQEEEIMGIVQDLNKKDRYIFLKRYIDGYSIDDIAKELKVTVDYI
YNRISRGKKKIQKLWKGSV

Specific function: Unknown

COG id: COG1595

COG function: function code K; DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21389; Mature: 21389

Theoretical pI: Translated: 7.57; Mature: 7.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFNSEEDLIIAMKKRDQDALKEVIDQYGKLILYIIHKSLSTPMEKQYVDDCYNDVFTVI
CCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
WFHIDQFDIDKGNLKSWMIGITKLKALEYKKKVYKENKIDKDVEINTGVHDRYEIEQEEE
HHHHCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCHHHH
IMGIVQDLNKKDRYIFLKRYIDGYSIDDIAKELKVTVDYIYNRISRGKKKIQKLWKGSV
HHHHHHHCCCCCCEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MIFNSEEDLIIAMKKRDQDALKEVIDQYGKLILYIIHKSLSTPMEKQYVDDCYNDVFTVI
CCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
WFHIDQFDIDKGNLKSWMIGITKLKALEYKKKVYKENKIDKDVEINTGVHDRYEIEQEEE
HHHHCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCHHHH
IMGIVQDLNKKDRYIFLKRYIDGYSIDDIAKELKVTVDYIYNRISRGKKKIQKLWKGSV
HHHHHHHCCCCCCEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA