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The map label for this gene is fliD [H]

Identifier: 52143717

GI number: 52143717

Start: 1605982

End: 1607370

Strand: Direct

Name: fliD [H]

Synonym: BCZK1517

Alternate gene names: 52143717

Gene position: 1605982-1607370 (Clockwise)

Preceding gene: 52143718

Following gene: 52143716

Centisome position: 30.3

GC content: 33.19

Gene sequence:

>1389_bases
ATGGCAGGAACATTAACGGGTATCGGTGGTAGACAACAAATATGGAACCTCGGAAATAATATGATCGATACATCTAACTT
TGTAGAATTAGAAATGCAAGCGTTAGAAATGAGAAAGACGCCTTATGCTAATGAAAAGAACCAACTTTCACAAGATAAAC
TATTATATACAAGTTTAAAATCAGAATTTAGCTCTTTTACGCAAACTTTTAAAAACTTAGCGGCTTTTAAAGGAAATGAG
AAAAAGGTAACAACATCACAAGACGGTTATATTAATGTAAAAGCTGATGGTGGCGCGATTGCCGGCACTTTCAATATGAC
AATTACACAGCTTGCACAGCGTCATCAAATAGCTTCTAATGAAATTAAAGATATAAATGCAAAACTTCCTAAAGATGAAA
CATTAAAACTAGGCGATAAAGAACTAAAAGTAACAACTGATATGACATATAAAGATTTAATTAACAAAATTAATGATGGG
GATTATGGTGTATCAGCTTATACACTTGGAAATAAAATTTTCATGACCTCTAAAAAAGAAGGAGCAACAAATGAAATTAA
ATTAGAAAAGACACCGCCTAATGTACTTACAGAATTATTTTATTCGAAAGTGGAATCTACGTCGGAAATGAAATTAAATA
CTATTAATGAAGCGTTGGATGCGAAATATACAATTAATGGTATTGATGGTACAAGTCCGAGCAATACAATTGAAACACTT
CCAGGTGTGAAAATTGAATTATTGAAAGTAACTGAGCCAAAAGTAGAAGGAACACCAGATGCAGGTACAACAACAGAACC
AAAAGCAAAAGGGATAGATCTAAAATTCACAGTAAGTGACTCAAACGTAACAGACGCAGCAAATGTTATTAAAAAAATGG
TTGCAGATTATAATAAAGCTGTTTCTACAGTAGATATCTTTGCTGGAAAAGGCGGGGCGTTCCAAGGCCAAGCTATTATG
CAAAGTGTGCGTCAAGCTATGAACAATGTTGTAACTTTTTCACAAGATGGTAATTACTTATTCTCATTTGGTATTCAATT
AAAACAAGATGGAACGATGGAAGTTAATGATGAAGCATTAACGAAAGCGTTAAAAGAAAAACCGGATGCAGCGAAGCAAT
TTTTCTTTAGTTCTAACGGTTTAGGAAAAATGATGGAAGAGCCACTTGATAAGTTATTTGGTGATAAAGGTGTAGTCGGA
GAGAGAGTAAAAAGCATTGACTCACGTGTAAGTGATTTAGATAAAAAGATTAAAGATATTGAGACGCAAAACTTGCAAAA
ACAAGATGAAATTGTGAAGAAGTATCAAAAACTAGAGAGTACATTAGCGGCGCTAGATAGCCAATTAAAAACAATTAAAG
CAATGACAAAACAAAAAAGTGATGATTAA

Upstream 100 bases:

>100_bases
CTTATATAAACGCAACGTATGAAGCTACGTTAAAAGCGGTTAGTACGATGAGTAAAACGAGTATTTTAGACTACATGTAA
TCTATAAGGAGTGAGAAATT

Downstream 100 bases:

>100_bases
TGAAAGGTAAGGAAGTGATTGTATGCAAGCATGGCAACGTTATATGCAAAATGATATTATGACGAGTAATCCGATTAAAA
ATACAATTTTTATTTATGAA

Product: flagellar capping protein

Products: NA

Alternate protein names: HAP2; Filament cap protein [H]

Number of amino acids: Translated: 462; Mature: 461

Protein sequence:

>462_residues
MAGTLTGIGGRQQIWNLGNNMIDTSNFVELEMQALEMRKTPYANEKNQLSQDKLLYTSLKSEFSSFTQTFKNLAAFKGNE
KKVTTSQDGYINVKADGGAIAGTFNMTITQLAQRHQIASNEIKDINAKLPKDETLKLGDKELKVTTDMTYKDLINKINDG
DYGVSAYTLGNKIFMTSKKEGATNEIKLEKTPPNVLTELFYSKVESTSEMKLNTINEALDAKYTINGIDGTSPSNTIETL
PGVKIELLKVTEPKVEGTPDAGTTTEPKAKGIDLKFTVSDSNVTDAANVIKKMVADYNKAVSTVDIFAGKGGAFQGQAIM
QSVRQAMNNVVTFSQDGNYLFSFGIQLKQDGTMEVNDEALTKALKEKPDAAKQFFFSSNGLGKMMEEPLDKLFGDKGVVG
ERVKSIDSRVSDLDKKIKDIETQNLQKQDEIVKKYQKLESTLAALDSQLKTIKAMTKQKSDD

Sequences:

>Translated_462_residues
MAGTLTGIGGRQQIWNLGNNMIDTSNFVELEMQALEMRKTPYANEKNQLSQDKLLYTSLKSEFSSFTQTFKNLAAFKGNE
KKVTTSQDGYINVKADGGAIAGTFNMTITQLAQRHQIASNEIKDINAKLPKDETLKLGDKELKVTTDMTYKDLINKINDG
DYGVSAYTLGNKIFMTSKKEGATNEIKLEKTPPNVLTELFYSKVESTSEMKLNTINEALDAKYTINGIDGTSPSNTIETL
PGVKIELLKVTEPKVEGTPDAGTTTEPKAKGIDLKFTVSDSNVTDAANVIKKMVADYNKAVSTVDIFAGKGGAFQGQAIM
QSVRQAMNNVVTFSQDGNYLFSFGIQLKQDGTMEVNDEALTKALKEKPDAAKQFFFSSNGLGKMMEEPLDKLFGDKGVVG
ERVKSIDSRVSDLDKKIKDIETQNLQKQDEIVKKYQKLESTLAALDSQLKTIKAMTKQKSDD
>Mature_461_residues
AGTLTGIGGRQQIWNLGNNMIDTSNFVELEMQALEMRKTPYANEKNQLSQDKLLYTSLKSEFSSFTQTFKNLAAFKGNEK
KVTTSQDGYINVKADGGAIAGTFNMTITQLAQRHQIASNEIKDINAKLPKDETLKLGDKELKVTTDMTYKDLINKINDGD
YGVSAYTLGNKIFMTSKKEGATNEIKLEKTPPNVLTELFYSKVESTSEMKLNTINEALDAKYTINGIDGTSPSNTIETLP
GVKIELLKVTEPKVEGTPDAGTTTEPKAKGIDLKFTVSDSNVTDAANVIKKMVADYNKAVSTVDIFAGKGGAFQGQAIMQ
SVRQAMNNVVTFSQDGNYLFSFGIQLKQDGTMEVNDEALTKALKEKPDAAKQFFFSSNGLGKMMEEPLDKLFGDKGVVGE
RVKSIDSRVSDLDKKIKDIETQNLQKQDEIVKKYQKLESTLAALDSQLKTIKAMTKQKSDD

Specific function: Required for the morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the

COG id: COG1345

COG function: function code N; Flagellar capping protein

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010810
- InterPro:   IPR010809
- InterPro:   IPR003481 [H]

Pfam domain/function: PF07196 Flagellin_IN; PF07195 FliD_C; PF02465 FliD_N [H]

EC number: NA

Molecular weight: Translated: 50854; Mature: 50723

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGTLTGIGGRQQIWNLGNNMIDTSNFVELEMQALEMRKTPYANEKNQLSQDKLLYTSLK
CCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHH
SEFSSFTQTFKNLAAFKGNEKKVTTSQDGYINVKADGGAIAGTFNMTITQLAQRHQIASN
HHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEECCCEEEEEHHHHHHHHHHHHHHHHH
EIKDINAKLPKDETLKLGDKELKVTTDMTYKDLINKINDGDYGVSAYTLGNKIFMTSKKE
HHHHHHCCCCCCCCEECCCCEEEEECCCHHHHHHHHCCCCCCCEEEEEECCEEEEECCCC
GATNEIKLEKTPPNVLTELFYSKVESTSEMKLNTINEALDAKYTINGIDGTSPSNTIETL
CCCCEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHC
PGVKIELLKVTEPKVEGTPDAGTTTEPKAKGIDLKFTVSDSNVTDAANVIKKMVADYNKA
CCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
VSTVDIFAGKGGAFQGQAIMQSVRQAMNNVVTFSQDGNYLFSFGIQLKQDGTMEVNDEAL
HHEEEEEECCCCCCCCHHHHHHHHHHHHHCEEEECCCCEEEEECEEEECCCCEEECHHHH
TKALKEKPDAAKQFFFSSNGLGKMMEEPLDKLFGDKGVVGERVKSIDSRVSDLDKKIKDI
HHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
ETQNLQKQDEIVKKYQKLESTLAALDSQLKTIKAMTKQKSDD
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
AGTLTGIGGRQQIWNLGNNMIDTSNFVELEMQALEMRKTPYANEKNQLSQDKLLYTSLK
CCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHH
SEFSSFTQTFKNLAAFKGNEKKVTTSQDGYINVKADGGAIAGTFNMTITQLAQRHQIASN
HHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEECCCEEEEEHHHHHHHHHHHHHHHHH
EIKDINAKLPKDETLKLGDKELKVTTDMTYKDLINKINDGDYGVSAYTLGNKIFMTSKKE
HHHHHHCCCCCCCCEECCCCEEEEECCCHHHHHHHHCCCCCCCEEEEEECCEEEEECCCC
GATNEIKLEKTPPNVLTELFYSKVESTSEMKLNTINEALDAKYTINGIDGTSPSNTIETL
CCCCEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHC
PGVKIELLKVTEPKVEGTPDAGTTTEPKAKGIDLKFTVSDSNVTDAANVIKKMVADYNKA
CCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
VSTVDIFAGKGGAFQGQAIMQSVRQAMNNVVTFSQDGNYLFSFGIQLKQDGTMEVNDEAL
HHEEEEEECCCCCCCCHHHHHHHHHHHHHCEEEECCCCEEEEECEEEECCCCEEECHHHH
TKALKEKPDAAKQFFFSSNGLGKMMEEPLDKLFGDKGVVGERVKSIDSRVSDLDKKIKDI
HHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
ETQNLQKQDEIVKKYQKLESTLAALDSQLKTIKAMTKQKSDD
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10678962; 10984043 [H]