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The map label for this gene is fliF [H]

Identifier: 52143713

GI number: 52143713

Start: 1609573

End: 1611147

Strand: Direct

Name: fliF [H]

Synonym: BCZK1523

Alternate gene names: 52143713

Gene position: 1609573-1611147 (Clockwise)

Preceding gene: 52143712

Following gene: 52143710

Centisome position: 30.36

GC content: 37.21

Gene sequence:

>1575_bases
ATGGAAAAGATGAAAAATGTTATCCAATCGTTAAAAACGTGGCATAAGTTAGTAATCGGTGCTGCGCTTTTAGCGATTGT
AACAGGAGCACTTTTATACTTCACCTTGCCAGATAAATATGTTGTTGTATATCAAAATTTAAATGATGCAGATAAGCAAG
AGATTACAGCAGAATTATCAAAGTTAGGTGTCGATTATCAGTTAGCGGCCGATGGATCGATTCGTGTGCAAAAAAATGAT
GCTCCATGGGTGCGAAAAGAAATGAATGGGATGGGCTTACCGTTTAATTCTAAAAGCGGTGAGGAAATTTTATTAGAAAG
CTCGCTCGGTTCAAGTGAGCAAGATAAAAAAATGAAGCAAATTGTCGGTACGAAAAAGCAATTGGAGCAAGATATTGTAA
GAAACTTTGCGACAGTTGAAACGGCGAATGTTCAAATTACATTACCTGAAAAAGAGACAATTTTTGATGAAGAAAAAGCA
AAAGGAACAGCTGCGATTACGGTTGGTGTAAAACGTGGTCAATTATTAACTGCTGATCAAGTTGCGGGTATACAGCAAAT
GATTAGTGCAGCAGTTCCTGGGGTGAAAGCAGAAGAAGTAAGTGTGATTGATAGTAAAAAAGGTGTCATCTCAAAAGGGG
CAGATGAAGCGCATTCTACTAGTTCCTCTTCTTATGAAAAAGAAGTAGAGATGCAGCATCAAATTGAAGGTAAATTAAAG
CAAGATATTGATGCAACGTTAATGACGATGTTTAAACCGAATGAATATAAAGTGAATACGAAAGTATCTGTAAACTATGA
TGAAGTTACACGTCAGTCAGAAAAGTATGGTGATAAAGGTGTACTTCGTAGTAAACAAGAGCAAGAAGAAAGCTCTACTG
CACAAGAAGGAGCAGAGACGAAGCAAGGCGCTGGTATTACAGCGAACGGCGAAGTACCAAACTATGGTACGAACAATAAT
CAAAATGGTAAAATCGTCTACGATAATAAAAATGGTAACAAAATTGAAAACTATGAAATAGATAAAACAGTTGAAACAAT
TAAGAAACACCCAGAATTAACGAAAACAAATGTTGTAGTATGGGTAGACAACGATACGTTAGTAAAACGAAAAATAGATA
TGACTACTTTCAAAGAAGCAATCGGCACAGCTGCTGGGCTTCAAGCTGATCCGAATGGAAACTTTACAAACGGTCAAGTT
AACGTTGTAACTGTTCAGTTTGATCAGCCGAAAGAAGAGAAGAAGAAAGAACCAGAAGAAAGCGGCATAAACTGGTGGTT
ATTCGGTGGAATTCCAGCTGGTTTATTAGCGATTGGTGGTCTAGTATGGTTCTTCTTAGCAAGACGTAAGAGAAAGAAAG
AAGAAGAGGAATATGAAGAATACTTAGCAGAAGAGGAAATTGCTGCAAGTAATGAAAGTATTATGGAAATTCCTGAAGAG
AAAATAGTACCAGAGCCAAAACCAGAACCAGAAGAACCGAAAGAACCGACGTTAGATGAACAAGTGCAGGATGCTACGAA
AGAACATGTAGAAGGAACTGCAAAAGTAATTAAAAAATGGTTAAATGGACAGTAA

Upstream 100 bases:

>100_bases
TCTCAAATGAAGACGGCTGCTCTCGTACGTGATAATCTTATTGAAAATTATAAGTCACTAATTAATATGCAAATTTAGGA
AAGTGGACGGGTGTGTTTAA

Downstream 100 bases:

>100_bases
GGGAGGAACAACGATGTTAGATGAAATCTCCTCCAAAGAAAAAGCTGCCATCCTTATTCGTACATTAGAAGAAGGGGTGG
CAGCAAAAGTCATTGAATAT

Product: flagellar MS-ring protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 524; Mature: 524

Protein sequence:

>524_residues
MEKMKNVIQSLKTWHKLVIGAALLAIVTGALLYFTLPDKYVVVYQNLNDADKQEITAELSKLGVDYQLAADGSIRVQKND
APWVRKEMNGMGLPFNSKSGEEILLESSLGSSEQDKKMKQIVGTKKQLEQDIVRNFATVETANVQITLPEKETIFDEEKA
KGTAAITVGVKRGQLLTADQVAGIQQMISAAVPGVKAEEVSVIDSKKGVISKGADEAHSTSSSSYEKEVEMQHQIEGKLK
QDIDATLMTMFKPNEYKVNTKVSVNYDEVTRQSEKYGDKGVLRSKQEQEESSTAQEGAETKQGAGITANGEVPNYGTNNN
QNGKIVYDNKNGNKIENYEIDKTVETIKKHPELTKTNVVVWVDNDTLVKRKIDMTTFKEAIGTAAGLQADPNGNFTNGQV
NVVTVQFDQPKEEKKKEPEESGINWWLFGGIPAGLLAIGGLVWFFLARRKRKKEEEEYEEYLAEEEIAASNESIMEIPEE
KIVPEPKPEPEEPKEPTLDEQVQDATKEHVEGTAKVIKKWLNGQ

Sequences:

>Translated_524_residues
MEKMKNVIQSLKTWHKLVIGAALLAIVTGALLYFTLPDKYVVVYQNLNDADKQEITAELSKLGVDYQLAADGSIRVQKND
APWVRKEMNGMGLPFNSKSGEEILLESSLGSSEQDKKMKQIVGTKKQLEQDIVRNFATVETANVQITLPEKETIFDEEKA
KGTAAITVGVKRGQLLTADQVAGIQQMISAAVPGVKAEEVSVIDSKKGVISKGADEAHSTSSSSYEKEVEMQHQIEGKLK
QDIDATLMTMFKPNEYKVNTKVSVNYDEVTRQSEKYGDKGVLRSKQEQEESSTAQEGAETKQGAGITANGEVPNYGTNNN
QNGKIVYDNKNGNKIENYEIDKTVETIKKHPELTKTNVVVWVDNDTLVKRKIDMTTFKEAIGTAAGLQADPNGNFTNGQV
NVVTVQFDQPKEEKKKEPEESGINWWLFGGIPAGLLAIGGLVWFFLARRKRKKEEEEYEEYLAEEEIAASNESIMEIPEE
KIVPEPKPEPEEPKEPTLDEQVQDATKEHVEGTAKVIKKWLNGQ
>Mature_524_residues
MEKMKNVIQSLKTWHKLVIGAALLAIVTGALLYFTLPDKYVVVYQNLNDADKQEITAELSKLGVDYQLAADGSIRVQKND
APWVRKEMNGMGLPFNSKSGEEILLESSLGSSEQDKKMKQIVGTKKQLEQDIVRNFATVETANVQITLPEKETIFDEEKA
KGTAAITVGVKRGQLLTADQVAGIQQMISAAVPGVKAEEVSVIDSKKGVISKGADEAHSTSSSSYEKEVEMQHQIEGKLK
QDIDATLMTMFKPNEYKVNTKVSVNYDEVTRQSEKYGDKGVLRSKQEQEESSTAQEGAETKQGAGITANGEVPNYGTNNN
QNGKIVYDNKNGNKIENYEIDKTVETIKKHPELTKTNVVVWVDNDTLVKRKIDMTTFKEAIGTAAGLQADPNGNFTNGQV
NVVTVQFDQPKEEKKKEPEESGINWWLFGGIPAGLLAIGGLVWFFLARRKRKKEEEEYEEYLAEEEIAASNESIMEIPEE
KIVPEPKPEPEEPKEPTLDEQVQDATKEHVEGTAKVIKKWLNGQ

Specific function: The M ring may be actively involved in energy transduction [H]

COG id: COG1766

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway lipoprotein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein. Bacterial flagellum basal body (By similarity) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliF family [H]

Homologues:

Organism=Escherichia coli, GI1788248, Length=373, Percent_Identity=24.1286863270777, Blast_Score=100, Evalue=2e-22,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013556
- InterPro:   IPR000067
- InterPro:   IPR006182 [H]

Pfam domain/function: PF01514 YscJ_FliF; PF08345 YscJ_FliF_C [H]

EC number: NA

Molecular weight: Translated: 58212; Mature: 58212

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKMKNVIQSLKTWHKLVIGAALLAIVTGALLYFTLPDKYVVVYQNLNDADKQEITAELS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEECCCCCHHHHHHHHHH
KLGVDYQLAADGSIRVQKNDAPWVRKEMNGMGLPFNSKSGEEILLESSLGSSEQDKKMKQ
HCCCCEEEECCCEEEEECCCCCHHHHHHCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHH
IVGTKKQLEQDIVRNFATVETANVQITLPEKETIFDEEKAKGTAAITVGVKRGQLLTADQ
HHCCHHHHHHHHHHHHHHEEECEEEEEECCCHHHCCHHHCCCCEEEEEEECCCCEECHHH
VAGIQQMISAAVPGVKAEEVSVIDSKKGVISKGADEAHSTSSSSYEKEVEMQHQIEGKLK
HHHHHHHHHHHCCCCCCHHEEEECCCCCCHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHH
QDIDATLMTMFKPNEYKVNTKVSVNYDEVTRQSEKYGDKGVLRSKQEQEESSTAQEGAET
HHHHHHHHHHCCCCCEEEEEEEEECHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHCCCH
KQGAGITANGEVPNYGTNNNQNGKIVYDNKNGNKIENYEIDKTVETIKKHPELTKTNVVV
HCCCCEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCEEHHHHHHHHHHCCCCCCCEEEE
WVDNDTLVKRKIDMTTFKEAIGTAAGLQADPNGNFTNGQVNVVTVQFDQPKEEKKKEPEE
EECCCEEEEHCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCCHHHHHCCCHH
SGINWWLFGGIPAGLLAIGGLVWFFLARRKRKKEEEEYEEYLAEEEIAASNESIMEIPEE
CCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHCCHH
KIVPEPKPEPEEPKEPTLDEQVQDATKEHVEGTAKVIKKWLNGQ
HCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEKMKNVIQSLKTWHKLVIGAALLAIVTGALLYFTLPDKYVVVYQNLNDADKQEITAELS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEECCCCCHHHHHHHHHH
KLGVDYQLAADGSIRVQKNDAPWVRKEMNGMGLPFNSKSGEEILLESSLGSSEQDKKMKQ
HCCCCEEEECCCEEEEECCCCCHHHHHHCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHH
IVGTKKQLEQDIVRNFATVETANVQITLPEKETIFDEEKAKGTAAITVGVKRGQLLTADQ
HHCCHHHHHHHHHHHHHHEEECEEEEEECCCHHHCCHHHCCCCEEEEEEECCCCEECHHH
VAGIQQMISAAVPGVKAEEVSVIDSKKGVISKGADEAHSTSSSSYEKEVEMQHQIEGKLK
HHHHHHHHHHHCCCCCCHHEEEECCCCCCHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHH
QDIDATLMTMFKPNEYKVNTKVSVNYDEVTRQSEKYGDKGVLRSKQEQEESSTAQEGAET
HHHHHHHHHHCCCCCEEEEEEEEECHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHCCCH
KQGAGITANGEVPNYGTNNNQNGKIVYDNKNGNKIENYEIDKTVETIKKHPELTKTNVVV
HCCCCEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCEEHHHHHHHHHHCCCCCCCEEEE
WVDNDTLVKRKIDMTTFKEAIGTAAGLQADPNGNFTNGQVNVVTVQFDQPKEEKKKEPEE
EECCCEEEEHCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCCHHHHHCCCHH
SGINWWLFGGIPAGLLAIGGLVWFFLARRKRKKEEEEYEEYLAEEEIAASNESIMEIPEE
CCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHCCHH
KIVPEPKPEPEEPKEPTLDEQVQDATKEHVEGTAKVIKKWLNGQ
HCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]