Click here to switch to the map view.

The map label for this gene is 52143615

Identifier: 52143615

GI number: 52143615

Start: 1706146

End: 1706586

Strand: Direct

Name: 52143615

Synonym: BCZK1621

Alternate gene names: NA

Gene position: 1706146-1706586 (Clockwise)

Preceding gene: 52143614

Following gene: 52143610

Centisome position: 32.19

GC content: 30.61

Gene sequence:

>441_bases
ATGAGCTTAGGGGAGCAGTTAAAAAAATTACGAGAGTCAAAGGGAATTTCACAAGAGGATGTTGCTAAAAAGATTGGTGT
GACGAGGCAAGCGGTATATAAGTGGGAGAATGATAAAAGTTGTCCTGATATTGATAATTTAATTTTACTAAGCGAAATGT
ACAATGTTACGCTCGATGAGTTAATAAAAGGGAATCAAAACATTAAAGAAAAAATACATATTGATGAAGAAGATGAGGAT
TTTGAGAAAGAGAACGAGTTTGGTTTTTATATTGGATTTGGTTTACTAATTATGAGTGCGTTCATTGATTATGAAAAAAT
ACAGGTGGTTGTATTAGTAATTGCACTATTCATGATGGTTTTTTATTCGGATGTGAAGAAAGTTATTTTGAATGAGTTCA
GATCGTTTTTTAAAAGAAAAGATATATATGATAAAAAGTGA

Upstream 100 bases:

>100_bases
TTTTTTACTGTGTAAACGAATGGATTACAGTGAATTTTACTAATGGTTTCTTTCTTTTATATCTCTTTTCATGTAATAAT
TTGTTAAAGGAGGGGATGTT

Downstream 100 bases:

>100_bases
GAAGAGTAAGTTATATTTCCTAGGAAAGAGTATAACAAGAAAGTAAATTGTTTTATAACGATTTTAGGATGTTAATAGTA
TGTTAAAAAGCTCAAACAAG

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator XRE Family; XRE Family Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; HTH-Type Transcriptional Regulator; Cro/CI Family Transcriptional Regulator; Transcriptional Regulator Cro/CI Family; Xin-Antitoxin System Antitoxin Component Xre Family; Helix-Turn-Helix Domain Protein; Helix-Turn-Helix Family Protein

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MSLGEQLKKLRESKGISQEDVAKKIGVTRQAVYKWENDKSCPDIDNLILLSEMYNVTLDELIKGNQNIKEKIHIDEEDED
FEKENEFGFYIGFGLLIMSAFIDYEKIQVVVLVIALFMMVFYSDVKKVILNEFRSFFKRKDIYDKK

Sequences:

>Translated_146_residues
MSLGEQLKKLRESKGISQEDVAKKIGVTRQAVYKWENDKSCPDIDNLILLSEMYNVTLDELIKGNQNIKEKIHIDEEDED
FEKENEFGFYIGFGLLIMSAFIDYEKIQVVVLVIALFMMVFYSDVKKVILNEFRSFFKRKDIYDKK
>Mature_145_residues
SLGEQLKKLRESKGISQEDVAKKIGVTRQAVYKWENDKSCPDIDNLILLSEMYNVTLDELIKGNQNIKEKIHIDEEDEDF
EKENEFGFYIGFGLLIMSAFIDYEKIQVVVLVIALFMMVFYSDVKKVILNEFRSFFKRKDIYDKK

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17179; Mature: 17048

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLGEQLKKLRESKGISQEDVAKKIGVTRQAVYKWENDKSCPDIDNLILLSEMYNVTLDE
CCHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHH
LIKGNQNIKEKIHIDEEDEDFEKENEFGFYIGFGLLIMSAFIDYEKIQVVVLVIALFMMV
HHCCCCCHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FYSDVKKVILNEFRSFFKRKDIYDKK
HHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SLGEQLKKLRESKGISQEDVAKKIGVTRQAVYKWENDKSCPDIDNLILLSEMYNVTLDE
CHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHH
LIKGNQNIKEKIHIDEEDEDFEKENEFGFYIGFGLLIMSAFIDYEKIQVVVLVIALFMMV
HHCCCCCHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FYSDVKKVILNEFRSFFKRKDIYDKK
HHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA