Click here to switch to the map view.

The map label for this gene is padR [H]

Identifier: 52143589

GI number: 52143589

Start: 1733196

End: 1733735

Strand: Direct

Name: padR [H]

Synonym: BCZK1645

Alternate gene names: 52143589

Gene position: 1733196-1733735 (Clockwise)

Preceding gene: 52143590

Following gene: 52143588

Centisome position: 32.7

GC content: 34.63

Gene sequence:

>540_bases
TTGAAAGGAAGAGATGTTGTTTTAGGCTTGTTAATGGGAAAAGAATTGTCTGGTTATGATATTAAAATTGTGTTTGAAGA
CGTATTTACTCATTTCTTTGATGGAAGTTTTGGGATGATCTATCCAACGTTACGTCAGTTGGAAAAAGAGGGGAAAATAA
AAAAAGAAGTTGTTATGCAAGAAGGGAAACCGAATAAGAAAATGTACTTTATTACAGATGCAGGGCGTGAAGAGTTTTAT
CAATACATGCAAACGGATGTAGAGAAAGATGTTTTACGTTCAGATTTTTTAATGAGGATGTATTTCGGTAATTACAGCGA
TGGTCAGGCGATAAAAAAATGGATTAAGGACGAAATTGAAAGGAAAGAAGCATACATTGCGGATCTACGTCTGAAATATG
AAAAGTGGAGAGAAGGTATTACTTTTGTTGAGGAAATTTCACTTGATGTAGGAATCGCATCGTATAGTGCTCAAGTAGAG
ACTTTGAAAAGAAAACTAGGGCAACTAGAAGCAAAAGAACACAATAAAATGGAAGAGTGA

Upstream 100 bases:

>100_bases
TTAGAAACATTTTACAAATAACAGAATAAGGTATATAATCAATAATCATATTAACAATGTTAATATGATTATTGATTATA
TACTATACGGGGGGCTTATT

Downstream 100 bases:

>100_bases
AAAAACGTTCATAATAAATAAAGGGGTAGAAGAACATGGAACAATCAAAGGGTATTAAGATTGTCTTTTTAATGTGCTTA
GGTATATTTCTTTGTATGAT

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MKGRDVVLGLLMGKELSGYDIKIVFEDVFTHFFDGSFGMIYPTLRQLEKEGKIKKEVVMQEGKPNKKMYFITDAGREEFY
QYMQTDVEKDVLRSDFLMRMYFGNYSDGQAIKKWIKDEIERKEAYIADLRLKYEKWREGITFVEEISLDVGIASYSAQVE
TLKRKLGQLEAKEHNKMEE

Sequences:

>Translated_179_residues
MKGRDVVLGLLMGKELSGYDIKIVFEDVFTHFFDGSFGMIYPTLRQLEKEGKIKKEVVMQEGKPNKKMYFITDAGREEFY
QYMQTDVEKDVLRSDFLMRMYFGNYSDGQAIKKWIKDEIERKEAYIADLRLKYEKWREGITFVEEISLDVGIASYSAQVE
TLKRKLGQLEAKEHNKMEE
>Mature_179_residues
MKGRDVVLGLLMGKELSGYDIKIVFEDVFTHFFDGSFGMIYPTLRQLEKEGKIKKEVVMQEGKPNKKMYFITDAGREEFY
QYMQTDVEKDVLRSDFLMRMYFGNYSDGQAIKKWIKDEIERKEAYIADLRLKYEKWREGITFVEEISLDVGIASYSAQVE
TLKRKLGQLEAKEHNKMEE

Specific function: Negative transcriptional regulator of padC phenolic acid decarboxylase [H]

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018309
- InterPro:   IPR005149
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03551 PadR; PF10400 Vir_act_alpha_C [H]

EC number: NA

Molecular weight: Translated: 21118; Mature: 21118

Theoretical pI: Translated: 5.47; Mature: 5.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGRDVVLGLLMGKELSGYDIKIVFEDVFTHFFDGSFGMIYPTLRQLEKEGKIKKEVVMQ
CCCHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHH
EGKPNKKMYFITDAGREEFYQYMQTDVEKDVLRSDFLMRMYFGNYSDGQAIKKWIKDEIE
CCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
RKEAYIADLRLKYEKWREGITFVEEISLDVGIASYSAQVETLKRKLGQLEAKEHNKMEE
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCC
>Mature Secondary Structure
MKGRDVVLGLLMGKELSGYDIKIVFEDVFTHFFDGSFGMIYPTLRQLEKEGKIKKEVVMQ
CCCHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHH
EGKPNKKMYFITDAGREEFYQYMQTDVEKDVLRSDFLMRMYFGNYSDGQAIKKWIKDEIE
CCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
RKEAYIADLRLKYEKWREGITFVEEISLDVGIASYSAQVETLKRKLGQLEAKEHNKMEE
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8973323; 9384377 [H]