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The map label for this gene is ydfK [H]

Identifier: 52143562

GI number: 52143562

Start: 1764088

End: 1764804

Strand: Direct

Name: ydfK [H]

Synonym: BCZK1672

Alternate gene names: 52143562

Gene position: 1764088-1764804 (Clockwise)

Preceding gene: 52143564

Following gene: 52143561

Centisome position: 33.28

GC content: 34.87

Gene sequence:

>717_bases
ATGGTTATATTAGGAGCAGTTGTAAATGGGATTTGTATTATATTTGGTACTTTACTAGGTAAATTATTTAGTAGGATTCC
AGAAAGTATGAAGGGAACAATTATGCATGCGATTGGTTTAGCGGTTACTGTGCTTGGACTTCAAATGGCATTGAAAAGTG
AAAATTTTCTTGTTGTCATACTGAGTTTAGTAATTGGTACCGTCATCGGGGAATGGCTACAATTAGAGGGAAAGTTAAAA
CAGTTAGGAGATTGGCTAGAAAATAAAGTTGGATCGAAAGGGAAAGGGAGCATATCAGAAGGTTTTGTAACAGCTACTTT
AATTTTTGCAATTGGCGCAATGGGGATACTTGGTGCACTCGACAGTGGTATTCGTGGCAATCATGATATTTTATTTACAA
AGGCGATTATCGACGGATTTATTTCTATTATATTAACGACAACTCTAGGGATTGGCGTAGTATTTTCAGCGATTCCAGTA
ATTTTATATGAAGGTGGCATTGCAGTTTTTGCAACACAAATTAATAGTGTTGTCCCGAAAGAATTAATGAATCAATTTAT
AGTGGAAATGACAGCTACAGGCGGTATTATGATAGCCGCTATCGGATTGAACTTACTCGGATTTATTAAAATTAAAGTGG
CAAATTTACTTCCAGGTATATTAGTAGTTGGAATCATTGTTTCACTTATTTATAGTTACGGTTTAATAGTAAAGTAG

Upstream 100 bases:

>100_bases
TGTTAATATTCTCAATATTAAGTTAACATATAGATAACCTGTAAATCAATGAATAAACCAAAATATAGAAATAAAGAATT
TGAAGGGTGAAGAATGAAAA

Downstream 100 bases:

>100_bases
GGGATGGAGTTACAGATGGAGGAATTTCAATTTACAAAACGTGTGCATAACATATTGAAGATTGCAGCAGAAGAGGGAGA
AAGTAATATCATTCAACCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MVILGAVVNGICIIFGTLLGKLFSRIPESMKGTIMHAIGLAVTVLGLQMALKSENFLVVILSLVIGTVIGEWLQLEGKLK
QLGDWLENKVGSKGKGSISEGFVTATLIFAIGAMGILGALDSGIRGNHDILFTKAIIDGFISIILTTTLGIGVVFSAIPV
ILYEGGIAVFATQINSVVPKELMNQFIVEMTATGGIMIAAIGLNLLGFIKIKVANLLPGILVVGIIVSLIYSYGLIVK

Sequences:

>Translated_238_residues
MVILGAVVNGICIIFGTLLGKLFSRIPESMKGTIMHAIGLAVTVLGLQMALKSENFLVVILSLVIGTVIGEWLQLEGKLK
QLGDWLENKVGSKGKGSISEGFVTATLIFAIGAMGILGALDSGIRGNHDILFTKAIIDGFISIILTTTLGIGVVFSAIPV
ILYEGGIAVFATQINSVVPKELMNQFIVEMTATGGIMIAAIGLNLLGFIKIKVANLLPGILVVGIIVSLIYSYGLIVK
>Mature_238_residues
MVILGAVVNGICIIFGTLLGKLFSRIPESMKGTIMHAIGLAVTVLGLQMALKSENFLVVILSLVIGTVIGEWLQLEGKLK
QLGDWLENKVGSKGKGSISEGFVTATLIFAIGAMGILGALDSGIRGNHDILFTKAIIDGFISIILTTTLGIGVVFSAIPV
ILYEGGIAVFATQINSVVPKELMNQFIVEMTATGGIMIAAIGLNLLGFIKIKVANLLPGILVVGIIVSLIYSYGLIVK

Specific function: Unknown

COG id: COG1811

COG function: function code R; Uncharacterized membrane protein, possible Na+ channel or pump

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789338, Length=166, Percent_Identity=25.3012048192771, Blast_Score=65, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007563 [H]

Pfam domain/function: PF04474 DUF554 [H]

EC number: NA

Molecular weight: Translated: 24967; Mature: 24967

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVILGAVVNGICIIFGTLLGKLFSRIPESMKGTIMHAIGLAVTVLGLQMALKSENFLVVI
CEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
LSLVIGTVIGEWLQLEGKLKQLGDWLENKVGSKGKGSISEGFVTATLIFAIGAMGILGAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
DSGIRGNHDILFTKAIIDGFISIILTTTLGIGVVFSAIPVILYEGGIAVFATQINSVVPK
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHH
ELMNQFIVEMTATGGIMIAAIGLNLLGFIKIKVANLLPGILVVGIIVSLIYSYGLIVK
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MVILGAVVNGICIIFGTLLGKLFSRIPESMKGTIMHAIGLAVTVLGLQMALKSENFLVVI
CEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
LSLVIGTVIGEWLQLEGKLKQLGDWLENKVGSKGKGSISEGFVTATLIFAIGAMGILGAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
DSGIRGNHDILFTKAIIDGFISIILTTTLGIGVVFSAIPVILYEGGIAVFATQINSVVPK
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHH
ELMNQFIVEMTATGGIMIAAIGLNLLGFIKIKVANLLPGILVVGIIVSLIYSYGLIVK
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]