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The map label for this gene is ydaO [H]

Identifier: 52143537

GI number: 52143537

Start: 1793868

End: 1795694

Strand: Direct

Name: ydaO [H]

Synonym: BCZK1697

Alternate gene names: 52143537

Gene position: 1793868-1795694 (Clockwise)

Preceding gene: 52143536

Following gene: 52143538

Centisome position: 33.84

GC content: 34.87

Gene sequence:

>1827_bases
TTGGTTTCATCTATTAAAAGATTTTTAATTGGAAGACCGTTAAAATCAACTGAGTTAGGAGAACAAAAGCTTAATAAAAC
GAAGGCACTAGCAATTTTATCTTCTGACGCTTTATCATCGGTTGCTTACGGTCCAGAGCAAATTTTAATTGCATTAGCAG
GCGTTGGAGCGATAGCTTATTGGTATTCCATTCCGATAGCTATTGGGGTATTAGTATTATTGACAGCCCTTATTTTATCT
TATCGACAAATTATTTTTGCTTATCCGCATGGCGGGGGCGCATATGTTGTATCAAAAGAAAATTTAGGGATGAATCCAGG
GTTAATAGCTGGAGGATCTTTATTAGTCGATTATATTTTAACTGTTGCAGTAAGTGTGTCTGCAGGTACAGACGCACTCA
CATCAGCTTTTCCTAGTTTACATGCACATAATGTAATCATTGCGATTATATTTGTTATATTTATTACCATCTTAAATTTA
AGAGGCGTAACAGAATCAGCTTCTGTTTTAGCATATCCTGTTTATTTATTCGTTTTAGCACTATTTATATTAATTGGTGT
AGGGATATATAATATTTTAACGGGTCACGTTTCGCAGGCTCTACACACGCCGATTGGAACGCCGGTTGCGGGAATTAGTT
TGTTTTTACTGCTAAGAGCATTTGCTTCAGGAAGCTCTGCTTTAACAGGTGTTGAGGCGATATCTAATGCAATTCCAAAT
TTTAAAGATCCTGCACCTAACAATGCAGCGAAAACATTGCTTGCAATGGGTGCATTACTTGCAGTTTTATTTTCAGGAAT
TGTGTTCTTAGCTTATTATTACGGAATTTCTCCAAGTAAAGAAGTAACAGTTGTTTCACAAATTGCTGAACAAACATTTG
GACGTAATTTCATGTACTATTTTATACAAGGTACAACGGCTTTAATATTAATTCTTGCTGCTAACACAGGATATTCTGCG
TTTCCGTTATTAGCAGTAAACCTTGCAAAAGATAAGTTTATACCGAGAATGTTTACGATTAGAGGAGATCGCCTAGGTTA
CTCAAACGGAATTATTATACTTGGAATTGCATCTATTATTTTAATTGTAGCTTTCCAAGGGCAAACAGAGCATTTAATTC
CATTATACGCAGTAGGTGTATTTATTCCATTTACACTTTCTCAAACGGGTATGGTATTAAAATGGCTTCGTGAAAAACCT
GAAGGATGGGCTTTGAGATTAACGGTCAATTTAATTGGTGCAGTCATTAGTTTTATCGTAATGAGTATGTTCTTTTTAAC
TAAGTTCGCACAAGTTTGGTCAATCCTTATTTTCTTACCTGTTATTATCTTCTTGTTCCACAGAATTAAGAAGCATTATG
ATGCAGTAGGTGACCAACTAAGTTTAAAAACTTGTGAACGGATTGTACCGATTGAAGGAAATGTAATTGTCGTTCCAGTA
GCTGGTATGACGCATGTAGTAGAAAATTCATTAAACTATGCGAAGTCTCTTTCGGCAGATCAAGTTATCGCTGTATATGT
TGCTTTTGACAGAGAAGAGGAAAAGAAATTTGAAGAGAAATGGAAGAAGTGGCAACCTGAAGTAAGGCTTGTTACATTAC
ATTCTTATTATAGAAGTATTATTCAACCGCTAACAAAGTTTATTGATACAGTACAATATAAAGCGAGTGAATCAAATTAC
CGAGTTACTGTCGTTATACCACAGTTCATTCCGAAAAAAGGTTGGCATAACATTCTTCATAATCAATCTAGTTTACTTAT
TCGTGCGTATTTACTTTATAAAAGAAATGTTGTTATTACGACGGTTCCATATCATTTGAAAAAGTAA

Upstream 100 bases:

>100_bases
TTCGTTATGGCTTGTAGACATTTTTTGTTTTCTGAAGAAATAGTTTATCCGCTGTAACTAGCAGAAAAGTTCGTACAAAA
TTATTGGAGAGTGGACAGCA

Downstream 100 bases:

>100_bases
GAAGGTTTTTTAAGGATAGCTTTACGTAAGTGAAGCTATCCTTTTTGTGTATATTCTATGCATAATTGCATATCAGTTAT
AAAAGTATATTGATATAATT

Product: amino acid permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 608; Mature: 608

Protein sequence:

>608_residues
MVSSIKRFLIGRPLKSTELGEQKLNKTKALAILSSDALSSVAYGPEQILIALAGVGAIAYWYSIPIAIGVLVLLTALILS
YRQIIFAYPHGGGAYVVSKENLGMNPGLIAGGSLLVDYILTVAVSVSAGTDALTSAFPSLHAHNVIIAIIFVIFITILNL
RGVTESASVLAYPVYLFVLALFILIGVGIYNILTGHVSQALHTPIGTPVAGISLFLLLRAFASGSSALTGVEAISNAIPN
FKDPAPNNAAKTLLAMGALLAVLFSGIVFLAYYYGISPSKEVTVVSQIAEQTFGRNFMYYFIQGTTALILILAANTGYSA
FPLLAVNLAKDKFIPRMFTIRGDRLGYSNGIIILGIASIILIVAFQGQTEHLIPLYAVGVFIPFTLSQTGMVLKWLREKP
EGWALRLTVNLIGAVISFIVMSMFFLTKFAQVWSILIFLPVIIFLFHRIKKHYDAVGDQLSLKTCERIVPIEGNVIVVPV
AGMTHVVENSLNYAKSLSADQVIAVYVAFDREEEKKFEEKWKKWQPEVRLVTLHSYYRSIIQPLTKFIDTVQYKASESNY
RVTVVIPQFIPKKGWHNILHNQSSLLIRAYLLYKRNVVITTVPYHLKK

Sequences:

>Translated_608_residues
MVSSIKRFLIGRPLKSTELGEQKLNKTKALAILSSDALSSVAYGPEQILIALAGVGAIAYWYSIPIAIGVLVLLTALILS
YRQIIFAYPHGGGAYVVSKENLGMNPGLIAGGSLLVDYILTVAVSVSAGTDALTSAFPSLHAHNVIIAIIFVIFITILNL
RGVTESASVLAYPVYLFVLALFILIGVGIYNILTGHVSQALHTPIGTPVAGISLFLLLRAFASGSSALTGVEAISNAIPN
FKDPAPNNAAKTLLAMGALLAVLFSGIVFLAYYYGISPSKEVTVVSQIAEQTFGRNFMYYFIQGTTALILILAANTGYSA
FPLLAVNLAKDKFIPRMFTIRGDRLGYSNGIIILGIASIILIVAFQGQTEHLIPLYAVGVFIPFTLSQTGMVLKWLREKP
EGWALRLTVNLIGAVISFIVMSMFFLTKFAQVWSILIFLPVIIFLFHRIKKHYDAVGDQLSLKTCERIVPIEGNVIVVPV
AGMTHVVENSLNYAKSLSADQVIAVYVAFDREEEKKFEEKWKKWQPEVRLVTLHSYYRSIIQPLTKFIDTVQYKASESNY
RVTVVIPQFIPKKGWHNILHNQSSLLIRAYLLYKRNVVITTVPYHLKK
>Mature_608_residues
MVSSIKRFLIGRPLKSTELGEQKLNKTKALAILSSDALSSVAYGPEQILIALAGVGAIAYWYSIPIAIGVLVLLTALILS
YRQIIFAYPHGGGAYVVSKENLGMNPGLIAGGSLLVDYILTVAVSVSAGTDALTSAFPSLHAHNVIIAIIFVIFITILNL
RGVTESASVLAYPVYLFVLALFILIGVGIYNILTGHVSQALHTPIGTPVAGISLFLLLRAFASGSSALTGVEAISNAIPN
FKDPAPNNAAKTLLAMGALLAVLFSGIVFLAYYYGISPSKEVTVVSQIAEQTFGRNFMYYFIQGTTALILILAANTGYSA
FPLLAVNLAKDKFIPRMFTIRGDRLGYSNGIIILGIASIILIVAFQGQTEHLIPLYAVGVFIPFTLSQTGMVLKWLREKP
EGWALRLTVNLIGAVISFIVMSMFFLTKFAQVWSILIFLPVIIFLFHRIKKHYDAVGDQLSLKTCERIVPIEGNVIVVPV
AGMTHVVENSLNYAKSLSADQVIAVYVAFDREEEKKFEEKWKKWQPEVRLVTLHSYYRSIIQPLTKFIDTVQYKASESNY
RVTVVIPQFIPKKGWHNILHNQSSLLIRAYLLYKRNVVITTVPYHLKK

Specific function: Probable Amino-Acid Or Metabolite Transport Protein. [C]

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002293 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 66764; Mature: 66764

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: PS00449 ATPASE_A

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSSIKRFLIGRPLKSTELGEQKLNKTKALAILSSDALSSVAYGPEQILIALAGVGAIAY
CCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHEECHHHHHHHCCCHHHHHHHHHHHHHHHH
WYSIPIAIGVLVLLTALILSYRQIIFAYPHGGGAYVVSKENLGMNPGLIAGGSLLVDYIL
HHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEECCCCCCCCCCEECHHHHHHHHH
TVAVSVSAGTDALTSAFPSLHAHNVIIAIIFVIFITILNLRGVTESASVLAYPVYLFVLA
HHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
LFILIGVGIYNILTGHVSQALHTPIGTPVAGISLFLLLRAFASGSSALTGVEAISNAIPN
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
FKDPAPNNAAKTLLAMGALLAVLFSGIVFLAYYYGISPSKEVTVVSQIAEQTFGRNFMYY
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEE
FIQGTTALILILAANTGYSAFPLLAVNLAKDKFIPRMFTIRGDRLGYSNGIIILGIASII
EEECCEEEEEEEEECCCCCHHHHHHEEHHHHHCCCHHEEEECCCCCCCCCEEHHHHHHHH
LIVAFQGQTEHLIPLYAVGVFIPFTLSQTGMVLKWLREKPEGWALRLTVNLIGAVISFIV
HHHEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHH
MSMFFLTKFAQVWSILIFLPVIIFLFHRIKKHYDAVGDQLSLKTCERIVPIEGNVIVVPV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHEECCCCCEEEEEC
AGMTHVVENSLNYAKSLSADQVIAVYVAFDREEEKKFEEKWKKWQPEVRLVTLHSYYRSI
CCHHHHHHHHHHHHHCCCCCCEEEEEEEECCHHHHHHHHHHHCCCCCEEEEEHHHHHHHH
IQPLTKFIDTVQYKASESNYRVTVVIPQFIPKKGWHNILHNQSSLLIRAYLLYKRNVVIT
HHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHCCCHHHHHHHHHHHHCCEEEE
TVPYHLKK
ECCHHCCC
>Mature Secondary Structure
MVSSIKRFLIGRPLKSTELGEQKLNKTKALAILSSDALSSVAYGPEQILIALAGVGAIAY
CCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHEECHHHHHHHCCCHHHHHHHHHHHHHHHH
WYSIPIAIGVLVLLTALILSYRQIIFAYPHGGGAYVVSKENLGMNPGLIAGGSLLVDYIL
HHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEECCCCCCCCCCEECHHHHHHHHH
TVAVSVSAGTDALTSAFPSLHAHNVIIAIIFVIFITILNLRGVTESASVLAYPVYLFVLA
HHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
LFILIGVGIYNILTGHVSQALHTPIGTPVAGISLFLLLRAFASGSSALTGVEAISNAIPN
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
FKDPAPNNAAKTLLAMGALLAVLFSGIVFLAYYYGISPSKEVTVVSQIAEQTFGRNFMYY
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEE
FIQGTTALILILAANTGYSAFPLLAVNLAKDKFIPRMFTIRGDRLGYSNGIIILGIASII
EEECCEEEEEEEEECCCCCHHHHHHEEHHHHHCCCHHEEEECCCCCCCCCEEHHHHHHHH
LIVAFQGQTEHLIPLYAVGVFIPFTLSQTGMVLKWLREKPEGWALRLTVNLIGAVISFIV
HHHEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHH
MSMFFLTKFAQVWSILIFLPVIIFLFHRIKKHYDAVGDQLSLKTCERIVPIEGNVIVVPV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHEECCCCCEEEEEC
AGMTHVVENSLNYAKSLSADQVIAVYVAFDREEEKKFEEKWKKWQPEVRLVTLHSYYRSI
CCHHHHHHHHHHHHHCCCCCCEEEEEEEECCHHHHHHHHHHHCCCCCEEEEEHHHHHHHH
IQPLTKFIDTVQYKASESNYRVTVVIPQFIPKKGWHNILHNQSSLLIRAYLLYKRNVVIT
HHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHCCCHHHHHHHHHHHHCCEEEE
TVPYHLKK
ECCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]