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The map label for this gene is yxdM [H]

Identifier: 52143423

GI number: 52143423

Start: 1938033

End: 1939913

Strand: Direct

Name: yxdM [H]

Synonym: BCZK1811

Alternate gene names: 52143423

Gene position: 1938033-1939913 (Clockwise)

Preceding gene: 52143428

Following gene: 52143421

Centisome position: 36.56

GC content: 33.23

Gene sequence:

>1881_bases
ATGAATATTAGAGAACTCGCATATCGGAATGTGACGCGAAATAGACGAACATATTCAGCATATTTTTTAAGTAGTGCATT
TGCTATTATGGCCTTTTTTGTTTATTCGTTTTTTGCGTTTCATCCGGCATTAAGTGCTGGAGAATTGGGACGATATGTGT
TCGTAAGTATGTCTTTTGCACAGTCCATTATTTACTTATTTACATTTTTCTTTATTTTATATTCGATGGGAATGTTTTTA
AAAACGAGAAAGCGTGAACTAGGAATTTTAATGATGTTAGGTATGACGAAATATCAATTAAAGCGTCTTATCTTTTTTGA
AAATATTATGATTGGAATAGGGGCAATTATTTTTGGGATACTTGCTGGAATGCTATTTTCCGGAATATTAATATTTATAG
CTCCAATGATATTAAAGTTAGATATTTCCTTACCCTATTACATTCCAATGAAAGCCATTGTTGTAACGAGTATTATGTTT
TTCGTATTATTTATGATCATTTCATTGTTTAGTGCAGGAATGATTCGAAAAAATAAAATTATGAAATTGTTTAGAGGATC
GGCAGAAGCGAAGCCGGAACCGAAAGCATCCATTATTTCTTCTATATTAGCAGTTATATTGCTTAGTGCCGGATATGCAG
GAGCGCTTATGTCACACGGTGCAATGGTATTTATCATGATGATTCCTGTTACAACGGTAGTCATTATTGGTACGTATTTG
CTGTACAAGCAGTTGAGTGTTTTTATTATTAGACTATGTAAAAAAAGTAAACGTTTTTATTGGACACAGACAAATATTAT
TACGTTGTCAGATTTAGCTTATCGTATGAGAGATAACGCAAGAATGTTCTTTATTGTAACGATAATTTCAACTGTAGCAT
TTTCAGCAATAGGTACATTAGTTGGCTTTACATCAATGACAAAGGCGATTATGGAGAGACCAATTGCGTTTCACTATCAT
TCTAAGCAAGGAAATAGTAATGAATCACAGCATTTGAAGATGATTGACGAAGGGTTAAAGAAACATAGTATAGCAGCTTC
AAAAACTAATATTTCAACGAAGAAAACGGAGGAGCAGTCGTTAAGAAGCGCCACGTTTATAAAGGAATCAGACTATAAGG
AATATGCGAAGTTAACAGGAGAACCCTTTCATACGGTATCAAAAAAAGAAGTTTTATTTTTGGCAGTTGATATACCAGGA
CCACCGATGAAAGAAAGAAAAGAAATTACGTTGCCGCATTTGAATGAACCTTTAAAAGTGAAAAAAATTAATACGTCTTC
ATTAAGTAAAATAATAAGAGGTAACGTTTATGTAATCTCTAACAAGCAGTATGATGCATTACAAGATGGATTTAAAGAGG
AAAAAAATTATGTATACAAAACAGAGGGAACGAAAGATGAAATTGAGGTTGGGAAAGAACTAACGCATCAGATGAAACCT
TATGAAGAACATGCAACGTTTAGTGCAGAAGAGTACGCACAAAACCAAAGTTTACAAATTGCAGGACCAATTCTATTTGT
AGGTTTCTTTATCGGTATTGTATTTTTCGTATGTGCAGGAAGCTTCCTTTATTTCCGTTTGTTTTCTGATTTGGAGGATG
ATACTCGTTTGTTTGAAATGATTCGAAAAGTAGGCTTAACGAGCGGAGAATTATCGAAAGTAGTTACAATTCGATTGGGA
CTTTTATTCTTTGTTCCAATATGTGTTGCAACATTACACGGGGCAGTAGCGTTAACTGCACTCGGGCAGATGTTTGAGTA
CTCACTATTTAAAGAAAATACGATTGTATTAAGTATTTTCGTAGGAATTCAAGTTGTATATTTCTTACTGATTCGATCTC
GTTATTTAAAACAATTGAAAGAGAGATTATATATTCGTTAA

Upstream 100 bases:

>100_bases
CCTTTCAATAATGTAAGGTTTTTGTCATTTGAATCGATGGAAGGGATTTCCGTACTTTACTAATATAAGAACATAGTTAG
TAGAAGGGCGGAGAAGTAAT

Downstream 100 bases:

>100_bases
ATGTGTTTTTTTAACTTGAGTACAAAATTTTCTAAAAAGAGGCAGGTATTACCAAAAAGTGATAAAATGGAAAAAGCGAG
GTGGAAAATTTAATAAAAAG

Product: ABC transporter, permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 626; Mature: 626

Protein sequence:

>626_residues
MNIRELAYRNVTRNRRTYSAYFLSSAFAIMAFFVYSFFAFHPALSAGELGRYVFVSMSFAQSIIYLFTFFFILYSMGMFL
KTRKRELGILMMLGMTKYQLKRLIFFENIMIGIGAIIFGILAGMLFSGILIFIAPMILKLDISLPYYIPMKAIVVTSIMF
FVLFMIISLFSAGMIRKNKIMKLFRGSAEAKPEPKASIISSILAVILLSAGYAGALMSHGAMVFIMMIPVTTVVIIGTYL
LYKQLSVFIIRLCKKSKRFYWTQTNIITLSDLAYRMRDNARMFFIVTIISTVAFSAIGTLVGFTSMTKAIMERPIAFHYH
SKQGNSNESQHLKMIDEGLKKHSIAASKTNISTKKTEEQSLRSATFIKESDYKEYAKLTGEPFHTVSKKEVLFLAVDIPG
PPMKERKEITLPHLNEPLKVKKINTSSLSKIIRGNVYVISNKQYDALQDGFKEEKNYVYKTEGTKDEIEVGKELTHQMKP
YEEHATFSAEEYAQNQSLQIAGPILFVGFFIGIVFFVCAGSFLYFRLFSDLEDDTRLFEMIRKVGLTSGELSKVVTIRLG
LLFFVPICVATLHGAVALTALGQMFEYSLFKENTIVLSIFVGIQVVYFLLIRSRYLKQLKERLYIR

Sequences:

>Translated_626_residues
MNIRELAYRNVTRNRRTYSAYFLSSAFAIMAFFVYSFFAFHPALSAGELGRYVFVSMSFAQSIIYLFTFFFILYSMGMFL
KTRKRELGILMMLGMTKYQLKRLIFFENIMIGIGAIIFGILAGMLFSGILIFIAPMILKLDISLPYYIPMKAIVVTSIMF
FVLFMIISLFSAGMIRKNKIMKLFRGSAEAKPEPKASIISSILAVILLSAGYAGALMSHGAMVFIMMIPVTTVVIIGTYL
LYKQLSVFIIRLCKKSKRFYWTQTNIITLSDLAYRMRDNARMFFIVTIISTVAFSAIGTLVGFTSMTKAIMERPIAFHYH
SKQGNSNESQHLKMIDEGLKKHSIAASKTNISTKKTEEQSLRSATFIKESDYKEYAKLTGEPFHTVSKKEVLFLAVDIPG
PPMKERKEITLPHLNEPLKVKKINTSSLSKIIRGNVYVISNKQYDALQDGFKEEKNYVYKTEGTKDEIEVGKELTHQMKP
YEEHATFSAEEYAQNQSLQIAGPILFVGFFIGIVFFVCAGSFLYFRLFSDLEDDTRLFEMIRKVGLTSGELSKVVTIRLG
LLFFVPICVATLHGAVALTALGQMFEYSLFKENTIVLSIFVGIQVVYFLLIRSRYLKQLKERLYIR
>Mature_626_residues
MNIRELAYRNVTRNRRTYSAYFLSSAFAIMAFFVYSFFAFHPALSAGELGRYVFVSMSFAQSIIYLFTFFFILYSMGMFL
KTRKRELGILMMLGMTKYQLKRLIFFENIMIGIGAIIFGILAGMLFSGILIFIAPMILKLDISLPYYIPMKAIVVTSIMF
FVLFMIISLFSAGMIRKNKIMKLFRGSAEAKPEPKASIISSILAVILLSAGYAGALMSHGAMVFIMMIPVTTVVIIGTYL
LYKQLSVFIIRLCKKSKRFYWTQTNIITLSDLAYRMRDNARMFFIVTIISTVAFSAIGTLVGFTSMTKAIMERPIAFHYH
SKQGNSNESQHLKMIDEGLKKHSIAASKTNISTKKTEEQSLRSATFIKESDYKEYAKLTGEPFHTVSKKEVLFLAVDIPG
PPMKERKEITLPHLNEPLKVKKINTSSLSKIIRGNVYVISNKQYDALQDGFKEEKNYVYKTEGTKDEIEVGKELTHQMKP
YEEHATFSAEEYAQNQSLQIAGPILFVGFFIGIVFFVCAGSFLYFRLFSDLEDDTRLFEMIRKVGLTSGELSKVVTIRLG
LLFFVPICVATLHGAVALTALGQMFEYSLFKENTIVLSIFVGIQVVYFLLIRSRYLKQLKERLYIR

Specific function: Part of the ABC transporter complex yxdLM which could be involved in peptide resistance [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 71302; Mature: 71302

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIRELAYRNVTRNRRTYSAYFLSSAFAIMAFFVYSFFAFHPALSAGELGRYVFVSMSFA
CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEHHHHH
QSIIYLFTFFFILYSMGMFLKTRKRELGILMMLGMTKYQLKRLIFFENIMIGIGAIIFGI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
LAGMLFSGILIFIAPMILKLDISLPYYIPMKAIVVTSIMFFVLFMIISLFSAGMIRKNKI
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
MKLFRGSAEAKPEPKASIISSILAVILLSAGYAGALMSHGAMVFIMMIPVTTVVIIGTYL
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
LYKQLSVFIIRLCKKSKRFYWTQTNIITLSDLAYRMRDNARMFFIVTIISTVAFSAIGTL
HHHHHHHHHHHHHHHCCCEEEEECCEEEHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHH
VGFTSMTKAIMERPIAFHYHSKQGNSNESQHLKMIDEGLKKHSIAASKTNISTKKTEEQS
HHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCHHCCCCCCCCHHHHHH
LRSATFIKESDYKEYAKLTGEPFHTVSKKEVLFLAVDIPGPPMKERKEITLPHLNEPLKV
HHHHHHHHHCCHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEE
KKINTSSLSKIIRGNVYVISNKQYDALQDGFKEEKNYVYKTEGTKDEIEVGKELTHQMKP
EECCHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHCCC
YEEHATFSAEEYAQNQSLQIAGPILFVGFFIGIVFFVCAGSFLYFRLFSDLEDDTRLFEM
CHHHCCCCHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
IRKVGLTSGELSKVVTIRLGLLFFVPICVATLHGAVALTALGQMFEYSLFKENTIVLSIF
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHH
VGIQVVYFLLIRSRYLKQLKERLYIR
HHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNIRELAYRNVTRNRRTYSAYFLSSAFAIMAFFVYSFFAFHPALSAGELGRYVFVSMSFA
CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEHHHHH
QSIIYLFTFFFILYSMGMFLKTRKRELGILMMLGMTKYQLKRLIFFENIMIGIGAIIFGI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
LAGMLFSGILIFIAPMILKLDISLPYYIPMKAIVVTSIMFFVLFMIISLFSAGMIRKNKI
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
MKLFRGSAEAKPEPKASIISSILAVILLSAGYAGALMSHGAMVFIMMIPVTTVVIIGTYL
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
LYKQLSVFIIRLCKKSKRFYWTQTNIITLSDLAYRMRDNARMFFIVTIISTVAFSAIGTL
HHHHHHHHHHHHHHHCCCEEEEECCEEEHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHH
VGFTSMTKAIMERPIAFHYHSKQGNSNESQHLKMIDEGLKKHSIAASKTNISTKKTEEQS
HHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCHHCCCCCCCCHHHHHH
LRSATFIKESDYKEYAKLTGEPFHTVSKKEVLFLAVDIPGPPMKERKEITLPHLNEPLKV
HHHHHHHHHCCHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEE
KKINTSSLSKIIRGNVYVISNKQYDALQDGFKEEKNYVYKTEGTKDEIEVGKELTHQMKP
EECCHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHCCC
YEEHATFSAEEYAQNQSLQIAGPILFVGFFIGIVFFVCAGSFLYFRLFSDLEDDTRLFEM
CHHHCCCCHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
IRKVGLTSGELSKVVTIRLGLLFFVPICVATLHGAVALTALGQMFEYSLFKENTIVLSIF
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHH
VGIQVVYFLLIRSRYLKQLKERLYIR
HHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8867804; 9384377; 7952181 [H]