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The map label for this gene is ywcH [H]

Identifier: 52143406

GI number: 52143406

Start: 1953802

End: 1954803

Strand: Reverse

Name: ywcH [H]

Synonym: BCZK1828

Alternate gene names: 52143406

Gene position: 1954803-1953802 (Counterclockwise)

Preceding gene: 52143404

Following gene: 52143412

Centisome position: 36.88

GC content: 38.92

Gene sequence:

>1002_bases
ATGATCAAATTAAGTGTATTAGACCAATCTCCTATTTCAGATGGTAGTACAGCAACCCAAGCTTTTTCACATACAGTTAC
GCTTGCGCAAGAAGTTGAAAAACTCGGATATACACGCTTTTGGGTATCAGAGCATCACAATTCTGTAAGCCTTGCTGGTT
CAAGTCCAGAAATACTTATTTCTCATATTGCAGCAAAAACGGAGCGTATGAGAGTTGGTTCGGGTGGTGTTATGTTACCT
CACTATAGCCCGTATAAAGTTGCTGAGAATTTCCGTGTTTTAGAAGCGCTTTATCCAAATCGTATTGACCTTGGTGTCGG
CAGAGCACCTGGCGGTATGCCAATTGCAACTCGCGCACTTCAAGAAGGGAAAATGGTCTCACTTGATCAATATCCAGAAC
AAATTGCAGATGTTGCAATGTACTTACATGATCAAGTACCAGAAAACCATCATTATGCGAATTTAAAAGCTACTCCTGTG
ATTCCAACATCTCCCGACATGTGGTTGCTTGGCTCTAGTGGAGAGAGTGCAAAGATCGCTGCACAACAAGGTGCTTCTTT
TGCATTCGCACAGTTCATAAACGGATACGGTGGACCCGAGGTAATGGAGGCCTATCAAAAACAATTCCAACCTTCCTATT
TAGGAGATAAACCAAAATCAATCGTCGCTATTTTTGTTATTTGCGGAGAAACAAATGAAGAGGCGGAACAAATTGCTTCT
AGTTTAGATTTATCAATCTTATTACTAGAACAAGGAAAGCGTACAACTGGTACTCCTTCTATCGAAACTGCTCAAAATTA
TTCATACAGCGCTTATGAGTTATTCCGTATAAAAGAAAATCGTCAACGTATGATTGTCGGTGATCCGTCTTCTGTGAAAG
AACAAATTATAAACTTAAGCAAAGCGTACAATACTGAAGAATTTATGATTGTCACAATTACTCATCGATTTGAAGATAAA
TTGAATTCTTATCGCTTATTGGCAAATGCTTTTCATTTATAA

Upstream 100 bases:

>100_bases
GATATATGATTTATCCACTTTTTATTTTGAGCATTTCATTACGCATTTTTCGTAAGTAAATATATAATAGGATGTACATT
AAGATTGAGAGGTATATTCT

Downstream 100 bases:

>100_bases
TGATAAAAGGGAGATACATCCATTATGATGCGTCTCCCTTCTTACTACTTATTACTTTTGTCTTCTATATATGCAATAGC
TTCTTTTAATAGTTCATCAA

Product: luciferase-like monooxygenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MIKLSVLDQSPISDGSTATQAFSHTVTLAQEVEKLGYTRFWVSEHHNSVSLAGSSPEILISHIAAKTERMRVGSGGVMLP
HYSPYKVAENFRVLEALYPNRIDLGVGRAPGGMPIATRALQEGKMVSLDQYPEQIADVAMYLHDQVPENHHYANLKATPV
IPTSPDMWLLGSSGESAKIAAQQGASFAFAQFINGYGGPEVMEAYQKQFQPSYLGDKPKSIVAIFVICGETNEEAEQIAS
SLDLSILLLEQGKRTTGTPSIETAQNYSYSAYELFRIKENRQRMIVGDPSSVKEQIINLSKAYNTEEFMIVTITHRFEDK
LNSYRLLANAFHL

Sequences:

>Translated_333_residues
MIKLSVLDQSPISDGSTATQAFSHTVTLAQEVEKLGYTRFWVSEHHNSVSLAGSSPEILISHIAAKTERMRVGSGGVMLP
HYSPYKVAENFRVLEALYPNRIDLGVGRAPGGMPIATRALQEGKMVSLDQYPEQIADVAMYLHDQVPENHHYANLKATPV
IPTSPDMWLLGSSGESAKIAAQQGASFAFAQFINGYGGPEVMEAYQKQFQPSYLGDKPKSIVAIFVICGETNEEAEQIAS
SLDLSILLLEQGKRTTGTPSIETAQNYSYSAYELFRIKENRQRMIVGDPSSVKEQIINLSKAYNTEEFMIVTITHRFEDK
LNSYRLLANAFHL
>Mature_333_residues
MIKLSVLDQSPISDGSTATQAFSHTVTLAQEVEKLGYTRFWVSEHHNSVSLAGSSPEILISHIAAKTERMRVGSGGVMLP
HYSPYKVAENFRVLEALYPNRIDLGVGRAPGGMPIATRALQEGKMVSLDQYPEQIADVAMYLHDQVPENHHYANLKATPV
IPTSPDMWLLGSSGESAKIAAQQGASFAFAQFINGYGGPEVMEAYQKQFQPSYLGDKPKSIVAIFVICGETNEEAEQIAS
SLDLSILLLEQGKRTTGTPSIETAQNYSYSAYELFRIKENRQRMIVGDPSSVKEQIINLSKAYNTEEFMIVTITHRFEDK
LNSYRLLANAFHL

Specific function: Unknown

COG id: COG2141

COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To bacterial alkanal monooxygenase alpha and beta chains [H]

Homologues:

Organism=Escherichia coli, GI1789551, Length=325, Percent_Identity=33.8461538461538, Blast_Score=203, Evalue=2e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011251
- InterPro:   IPR016048
- InterPro:   IPR019949 [H]

Pfam domain/function: PF00296 Bac_luciferase [H]

EC number: NA

Molecular weight: Translated: 36838; Mature: 36838

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKLSVLDQSPISDGSTATQAFSHTVTLAQEVEKLGYTRFWVSEHHNSVSLAGSSPEILI
CEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEECCCCHHHHH
SHIAAKTERMRVGSGGVMLPHYSPYKVAENFRVLEALYPNRIDLGVGRAPGGMPIATRAL
HHHHHHHHHEEECCCCEECCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHH
QEGKMVSLDQYPEQIADVAMYLHDQVPENHHYANLKATPVIPTSPDMWLLGSSGESAKIA
HCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCEECEEECCCCCCCCCEEEEECCCCCCEEE
AQQGASFAFAQFINGYGGPEVMEAYQKQFQPSYLGDKPKSIVAIFVICGETNEEAEQIAS
HHCCCCHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHH
SLDLSILLLEQGKRTTGTPSIETAQNYSYSAYELFRIKENRQRMIVGDPSSVKEQIINLS
HCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCHHHHHHHHHHH
KAYNTEEFMIVTITHRFEDKLNSYRLLANAFHL
HHCCCCCEEEEEEEHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIKLSVLDQSPISDGSTATQAFSHTVTLAQEVEKLGYTRFWVSEHHNSVSLAGSSPEILI
CEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEECCCCHHHHH
SHIAAKTERMRVGSGGVMLPHYSPYKVAENFRVLEALYPNRIDLGVGRAPGGMPIATRAL
HHHHHHHHHEEECCCCEECCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHH
QEGKMVSLDQYPEQIADVAMYLHDQVPENHHYANLKATPVIPTSPDMWLLGSSGESAKIA
HCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCEECEEECCCCCCCCCEEEEECCCCCCEEE
AQQGASFAFAQFINGYGGPEVMEAYQKQFQPSYLGDKPKSIVAIFVICGETNEEAEQIAS
HHCCCCHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHH
SLDLSILLLEQGKRTTGTPSIETAQNYSYSAYELFRIKENRQRMIVGDPSSVKEQIINLS
HCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCHHHHHHHHHHH
KAYNTEEFMIVTITHRFEDKLNSYRLLANAFHL
HHCCCCCEEEEEEEHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]