Click here to switch to the map view.

The map label for this gene is 52143386

Identifier: 52143386

GI number: 52143386

Start: 1974774

End: 1975319

Strand: Direct

Name: 52143386

Synonym: BCZK1848

Alternate gene names: NA

Gene position: 1974774-1975319 (Clockwise)

Preceding gene: 52143387

Following gene: 52143385

Centisome position: 37.25

GC content: 37.0

Gene sequence:

>546_bases
TTGCATGCGCTAGTAATTGGTGGAACAGGAATGCTAAAGAGGGTTTCTATATGGCTTTGTGAGCAAGGGTTTCATGTTTC
TATTATCGGAAGAGATGAAGTGAAATTAGAAAATGTTAAACGAGAGAGTGCTATACCAGAAAATATCACATGCCTTCCGT
TAGATTATCATAATGATGACGATGTAAAGGTAGCTATTAAAAGCACAATTGAGCGGAATGGCGCAATAACATTAGTTGTC
GCATGGATACACTCAAGTGCAAAAGATGCGTTATCACTTATTTGTAGAGAATTAGACTTGTCGTCTGAAACATACGAAGT
TTTTCATATTTTAGGCAGTAAAGCATCGAGAATAGCCTCACAAAAAATAGGCGGTACGCGATGTAGCTATCATAGAATAA
TTTTAGGTTTTATATTAGAAGATACATACGCAAGATGGCTTACTCATGAAGAAATATCGGATGGGGTAATAAAAGGAATT
GAAAGTAAATGTAATGAATGGATTGTAGGACGAGTAGAACCGTGGGAATTGCGGCCAACATGGTAA

Upstream 100 bases:

>100_bases
GCCACAAGTTTGAGTTCCATTCAGGGACATTGCAAGACAGGCTTAATTATTATAGGGAAGATAAACCTCATATGACGTTT
TATTAAGGGGGCAAAGAAAG

Downstream 100 bases:

>100_bases
GGGGGAATTGAAGTGAAGACAACGGTATATGTAACAAGGCATGGTGAAACGGAATGGAATGTAGCGAAGCGAATGCAAGG
ACGGAAAAATTCTGCTTTAA

Product: short chain dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MHALVIGGTGMLKRVSIWLCEQGFHVSIIGRDEVKLENVKRESAIPENITCLPLDYHNDDDVKVAIKSTIERNGAITLVV
AWIHSSAKDALSLICRELDLSSETYEVFHILGSKASRIASQKIGGTRCSYHRIILGFILEDTYARWLTHEEISDGVIKGI
ESKCNEWIVGRVEPWELRPTW

Sequences:

>Translated_181_residues
MHALVIGGTGMLKRVSIWLCEQGFHVSIIGRDEVKLENVKRESAIPENITCLPLDYHNDDDVKVAIKSTIERNGAITLVV
AWIHSSAKDALSLICRELDLSSETYEVFHILGSKASRIASQKIGGTRCSYHRIILGFILEDTYARWLTHEEISDGVIKGI
ESKCNEWIVGRVEPWELRPTW
>Mature_181_residues
MHALVIGGTGMLKRVSIWLCEQGFHVSIIGRDEVKLENVKRESAIPENITCLPLDYHNDDDVKVAIKSTIERNGAITLVV
AWIHSSAKDALSLICRELDLSSETYEVFHILGSKASRIASQKIGGTRCSYHRIILGFILEDTYARWLTHEEISDGVIKGI
ESKCNEWIVGRVEPWELRPTW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20429; Mature: 20429

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHALVIGGTGMLKRVSIWLCEQGFHVSIIGRDEVKLENVKRESAIPENITCLPLDYHNDD
CEEEEECCCCHHHHHEEEEECCCCEEEEEECCCCHHHHHHHHHCCCCCCEEEEECCCCCC
DVKVAIKSTIERNGAITLVVAWIHSSAKDALSLICRELDLSSETYEVFHILGSKASRIAS
CEEEEEEEHHCCCCCEEEEEEEHHCCHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHH
QKIGGTRCSYHRIILGFILEDTYARWLTHEEISDGVIKGIESKCNEWIVGRVEPWELRPT
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCC
W
C
>Mature Secondary Structure
MHALVIGGTGMLKRVSIWLCEQGFHVSIIGRDEVKLENVKRESAIPENITCLPLDYHNDD
CEEEEECCCCHHHHHEEEEECCCCEEEEEECCCCHHHHHHHHHCCCCCCEEEEECCCCCC
DVKVAIKSTIERNGAITLVVAWIHSSAKDALSLICRELDLSSETYEVFHILGSKASRIAS
CEEEEEEEHHCCCCCEEEEEEEHHCCHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHH
QKIGGTRCSYHRIILGFILEDTYARWLTHEEISDGVIKGIESKCNEWIVGRVEPWELRPT
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCC
W
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA