Click here to switch to the map view.

The map label for this gene is yqgC [H]

Identifier: 52143370

GI number: 52143370

Start: 1987626

End: 1988108

Strand: Reverse

Name: yqgC [H]

Synonym: BCZK1865

Alternate gene names: 52143370

Gene position: 1988108-1987626 (Counterclockwise)

Preceding gene: 52143371

Following gene: 52143384

Centisome position: 37.5

GC content: 34.99

Gene sequence:

>483_bases
GTGACTGTTTTCTTAACAATCTGTATCATTGCCTGTTTCATTATTTCATTTCTAGCTTTTATTTATCCTATTATCCCGGG
CATCCTAGCTGTCTGGGCTGGATATTTCATTTACCATTTTGGTATAAATGGCGGAGAACTAACGATTTCTTTTTGGATTA
TTCAAGCTATTTTCACACTATTCATTTTCGTTGCTGATTTTATTGCAAATGGATATTTCTTAAAGAAATACGGTAGTTCT
AAATGGGGCGAACGTGTCGGAATGATTTCGATCATTGCCGGATCTTTCTTCTTCCCACCATTCGGACTTATTATCATACC
GTTCTTAGCGGTATTTATAACCGAATTAATGCATAAAAAAGCGCCAAAAGACGCTTTTCTAGTAGGAGTTGCTACTGTAG
TTGGTTTTTTAAGCAGTACAGTAGCGAAAGCCATTCTCCAAATCATTATGATTATCATATTTGTATGTTATATCGTCTTT
TAA

Upstream 100 bases:

>100_bases
ATCGAATATGCCGGTTTTCAATTTAAGGCATTAGAACTTGATGGACATCAAGTGAAAAAAATTGCTGTACATAAATTAGA
TATACAAAAGGAGTTATAAA

Downstream 100 bases:

>100_bases
CCATCCCAATTTCGGGATGGTTTTTTAATATGAAATACCTACTCGACTATTCTCATATTTGTTTTCACTACACAGATTCC
ATGTAAATTGCGCTGTATCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MTVFLTICIIACFIISFLAFIYPIIPGILAVWAGYFIYHFGINGGELTISFWIIQAIFTLFIFVADFIANGYFLKKYGSS
KWGERVGMISIIAGSFFFPPFGLIIIPFLAVFITELMHKKAPKDAFLVGVATVVGFLSSTVAKAILQIIMIIIFVCYIVF

Sequences:

>Translated_160_residues
MTVFLTICIIACFIISFLAFIYPIIPGILAVWAGYFIYHFGINGGELTISFWIIQAIFTLFIFVADFIANGYFLKKYGSS
KWGERVGMISIIAGSFFFPPFGLIIIPFLAVFITELMHKKAPKDAFLVGVATVVGFLSSTVAKAILQIIMIIIFVCYIVF
>Mature_159_residues
TVFLTICIIACFIISFLAFIYPIIPGILAVWAGYFIYHFGINGGELTISFWIIQAIFTLFIFVADFIANGYFLKKYGSSK
WGERVGMISIIAGSFFFPPFGLIIIPFLAVFITELMHKKAPKDAFLVGVATVVGFLSSTVAKAILQIIMIIIFVCYIVF

Specific function: Unknown

COG id: COG2839

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007403 [H]

Pfam domain/function: PF04306 DUF456 [H]

EC number: NA

Molecular weight: Translated: 17837; Mature: 17706

Theoretical pI: Translated: 8.81; Mature: 8.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVFLTICIIACFIISFLAFIYPIIPGILAVWAGYFIYHFGINGGELTISFWIIQAIFTL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
FIFVADFIANGYFLKKYGSSKWGERVGMISIIAGSFFFPPFGLIIIPFLAVFITELMHKK
HHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC
APKDAFLVGVATVVGFLSSTVAKAILQIIMIIIFVCYIVF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
TVFLTICIIACFIISFLAFIYPIIPGILAVWAGYFIYHFGINGGELTISFWIIQAIFTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
FIFVADFIANGYFLKKYGSSKWGERVGMISIIAGSFFFPPFGLIIIPFLAVFITELMHKK
HHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC
APKDAFLVGVATVVGFLSSTVAKAILQIIMIIIFVCYIVF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]