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The map label for this gene is dal [H]

Identifier: 52143353

GI number: 52143353

Start: 2004600

End: 2005775

Strand: Direct

Name: dal [H]

Synonym: BCZK1884

Alternate gene names: 52143353

Gene position: 2004600-2005775 (Clockwise)

Preceding gene: 52143355

Following gene: 52143348

Centisome position: 37.82

GC content: 35.54

Gene sequence:

>1176_bases
ATGAGTTTGAAATATGGAAGAGATACAATTGTTGAAGTTGACTTAAATGCAGTAAAACATAATGTAAAAGAATTTAAAAA
ACGTGTGAATGATGAAAATATTGCAATGATGGCTGCTGTAAAAGCGAATGGGTATGGTCATGGGGCAGTTGAAGTTGCAA
AAGCTGCTATTGAAGCAGGAATAAATCAGCTTGCAGTTGCATTTGTAGATGAAGCGATAGAGTTAAGAGAAGCAGGAATT
AACGTGCCGATTTTAATTTTAGGCTATACATCAGTAGCGGTTGCGGAAGAAGCAATTCAATATGACGTTATGATGACTGT
TTATAGAAGTGAAGATTTACAAGGTATAAATGAAATCGCAAAACGTCTTCAAAAGAAAGCGCAAATTCAGGTGAAAATTG
ATACAGGAATGAGTCGCATTGGTTTACAGGAAGAAGAGGTTAAACCATTTTTAGAGGAATTAAAACGTATGGAGTATGTA
GAGGTAGTAGGAATGTTTACACATTACTCTACGGCAGATGAAATCGATAAATCATATACGAATATGCAAACAAGTTTATT
TGAGAAAGCTGTCAATACAGCAAAAGAATTAGGAATTCATATTCCATATATTCATAGTTCAAATAGTGCAGGTTCAATGG
AACTTAGCAATACATTTCAAAATATGGTTCGTGTAGGAATCGGGATTTATGGAATGTATCCTTCAAAAGAGGTAGATCAT
TCAGTTGTTTCTCTGCAGCCTGCGTTGTCGTTAAAATCAAAAGTAGCCCATATTAAGCATGCGAAGAAAAATCGCGGTGT
AAGTTATGGGAATACGTATGTAACGACTGGTGAAGAATGGATTGCCACTGTGCCTATTGGTTATGCTGATGGTTATAATC
GTCAGTTATCTAATAAAGGGCATGCATTAATAAATGGAGTTCGAGTACCTGTTATTGGCCGTGTTTGTATGGATCAGCTC
ATGTTAGACGTTTCAAAAGCAATGCCAGTACAAGTGGGAGACGAAGTAGTATTCTACGGTAAACAAGGCGAAGAAAACAT
CGCAGTAGAAGAAATAGCGGATATGTTAGGTACAATTAACTATGAAGTTACATGTATGTTAGATAGAAGAATTCCACGTG
TGTATAAAGAAAATAATGAAACAACTGCTGTTGTAAATATACTAAGAAAAAACTGA

Upstream 100 bases:

>100_bases
CTAGTAGTTTGACTAGCATATTGAAAAGTATTATATTGTAAAAGGTCATAAGAAACGTGAAATAGAATGGAATGCAATTA
TTGAGTTAGGAGTTAGACCA

Downstream 100 bases:

>100_bases
ATCGTTATGATTCAGTTTTTTTATTTTTGACAAATAAAAAATGCCCTATTAGTACCGTGTGATTGGATGTTCTTAAAACC
TACGGATTCCAATGAAAATA

Product: alanine racemase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 391; Mature: 390

Protein sequence:

>391_residues
MSLKYGRDTIVEVDLNAVKHNVKEFKKRVNDENIAMMAAVKANGYGHGAVEVAKAAIEAGINQLAVAFVDEAIELREAGI
NVPILILGYTSVAVAEEAIQYDVMMTVYRSEDLQGINEIAKRLQKKAQIQVKIDTGMSRIGLQEEEVKPFLEELKRMEYV
EVVGMFTHYSTADEIDKSYTNMQTSLFEKAVNTAKELGIHIPYIHSSNSAGSMELSNTFQNMVRVGIGIYGMYPSKEVDH
SVVSLQPALSLKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSNKGHALINGVRVPVIGRVCMDQL
MLDVSKAMPVQVGDEVVFYGKQGEENIAVEEIADMLGTINYEVTCMLDRRIPRVYKENNETTAVVNILRKN

Sequences:

>Translated_391_residues
MSLKYGRDTIVEVDLNAVKHNVKEFKKRVNDENIAMMAAVKANGYGHGAVEVAKAAIEAGINQLAVAFVDEAIELREAGI
NVPILILGYTSVAVAEEAIQYDVMMTVYRSEDLQGINEIAKRLQKKAQIQVKIDTGMSRIGLQEEEVKPFLEELKRMEYV
EVVGMFTHYSTADEIDKSYTNMQTSLFEKAVNTAKELGIHIPYIHSSNSAGSMELSNTFQNMVRVGIGIYGMYPSKEVDH
SVVSLQPALSLKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSNKGHALINGVRVPVIGRVCMDQL
MLDVSKAMPVQVGDEVVFYGKQGEENIAVEEIADMLGTINYEVTCMLDRRIPRVYKENNETTAVVNILRKN
>Mature_390_residues
SLKYGRDTIVEVDLNAVKHNVKEFKKRVNDENIAMMAAVKANGYGHGAVEVAKAAIEAGINQLAVAFVDEAIELREAGIN
VPILILGYTSVAVAEEAIQYDVMMTVYRSEDLQGINEIAKRLQKKAQIQVKIDTGMSRIGLQEEEVKPFLEELKRMEYVE
VVGMFTHYSTADEIDKSYTNMQTSLFEKAVNTAKELGIHIPYIHSSNSAGSMELSNTFQNMVRVGIGIYGMYPSKEVDHS
VVSLQPALSLKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSNKGHALINGVRVPVIGRVCMDQLM
LDVSKAMPVQVGDEVVFYGKQGEENIAVEEIADMLGTINYEVTCMLDRRIPRVYKENNETTAVVNILRKN

Specific function: Provides the D-alanine required for cell wall biosynthesis [H]

COG id: COG0787

COG function: function code M; Alanine racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the alanine racemase family [H]

Homologues:

Organism=Escherichia coli, GI1790487, Length=369, Percent_Identity=30.0813008130081, Blast_Score=162, Evalue=5e-41,
Organism=Escherichia coli, GI1787439, Length=373, Percent_Identity=30.0268096514745, Blast_Score=156, Evalue=3e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000821
- InterPro:   IPR009006
- InterPro:   IPR011079
- InterPro:   IPR001608
- InterPro:   IPR020622 [H]

Pfam domain/function: PF00842 Ala_racemase_C; PF01168 Ala_racemase_N [H]

EC number: =5.1.1.1 [H]

Molecular weight: Translated: 43417; Mature: 43286

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: PS00395 ALANINE_RACEMASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLKYGRDTIVEVDLNAVKHNVKEFKKRVNDENIAMMAAVKANGYGHGAVEVAKAAIEAG
CCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHH
INQLAVAFVDEAIELREAGINVPILILGYTSVAVAEEAIQYDVMMTVYRSEDLQGINEIA
HHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHEEECCHHHHHHHHHH
KRLQKKAQIQVKIDTGMSRIGLQEEEVKPFLEELKRMEYVEVVGMFTHYSTADEIDKSYT
HHHHHHCEEEEEEECCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
NMQTSLFEKAVNTAKELGIHIPYIHSSNSAGSMELSNTFQNMVRVGIGIYGMYPSKEVDH
HHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCEEECCCCCHHCC
SVVSLQPALSLKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSNKG
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCC
HALINGVRVPVIGRVCMDQLMLDVSKAMPVQVGDEVVFYGKQGEENIAVEEIADMLGTIN
CEEECCCCCHHHHHHHHHHHHHHHHHCCCEEECCEEEEECCCCCCCCCHHHHHHHHHCCC
YEVTCMLDRRIPRVYKENNETTAVVNILRKN
EEEEEEECCCCCHHHHCCCCCEEEHHEECCC
>Mature Secondary Structure 
SLKYGRDTIVEVDLNAVKHNVKEFKKRVNDENIAMMAAVKANGYGHGAVEVAKAAIEAG
CCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHH
INQLAVAFVDEAIELREAGINVPILILGYTSVAVAEEAIQYDVMMTVYRSEDLQGINEIA
HHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHEEECCHHHHHHHHHH
KRLQKKAQIQVKIDTGMSRIGLQEEEVKPFLEELKRMEYVEVVGMFTHYSTADEIDKSYT
HHHHHHCEEEEEEECCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
NMQTSLFEKAVNTAKELGIHIPYIHSSNSAGSMELSNTFQNMVRVGIGIYGMYPSKEVDH
HHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCEEECCCCCHHCC
SVVSLQPALSLKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSNKG
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCC
HALINGVRVPVIGRVCMDQLMLDVSKAMPVQVGDEVVFYGKQGEENIAVEEIADMLGTIN
CEEECCCCCHHHHHHHHHHHHHHHHHCCCEEECCEEEEECCCCCCCCCHHHHHHHHHCCC
YEVTCMLDRRIPRVYKENNETTAVVNILRKN
EEEEEEECCCCCHHHHCCCCCEEEHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA