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The map label for this gene is yfmR [H]

Identifier: 52143276

GI number: 52143276

Start: 2076300

End: 2078195

Strand: Direct

Name: yfmR [H]

Synonym: BCZK1964

Alternate gene names: 52143276

Gene position: 2076300-2078195 (Clockwise)

Preceding gene: 52143275

Following gene: 52143272

Centisome position: 39.17

GC content: 36.66

Gene sequence:

>1896_bases
ATGAAAATGTTAACTGTGGAAAATTTATCAAAATCATATGGAGAAAAACCGTTATTTGATGGATTATCATTTAGTATTGC
AGAAGGACAACGTGCCGGAATTATCGGTGTAAACGGAACTGGTAAATCAACTTTATTAAAAATTATTGCAGGGGCAGAAA
TTCCCGATACAGGTGATATGACTCATTCACGTGGATATACAATTAGTTATTTATCACAGCAGCCGGAGTTTGATGAGCAA
TTAACAGTATTAGAACAAGTCTTCCATGGTGATACACCTTTAATTCGTCTTCTTCGTGACTATGAAAAGGCGCTATTACA
TATCGAAAAAGATCCAAGCAATGAAAAAGTACAGGAACAATTATTTGCAGTGCAACAACGTATGGACGCAATGAGTGCGT
GGGAAGCAAATGCGAACGCAAAATCGTTATTAACGAAATTAGGAATTACTGATTTCACAGCAACTGTTGGAAATTTATCT
GGTGGACAGAAAAAACGTATTGCGATGGCGCAGTGTTTTATTGAAACACCGGATCTATTAATTTTAGATGAGCCTACGAA
CCATCTTGACCATGAAACAGTTGAGTGGTTAGAGGAATATTTAGCAAGGTACACAGGTGCAGTATTACTTGTAACCCATG
ATCGTTATTTCTTAGATCGTGTGACGAATCGTATTTTCGAATTAGATAATGGAAAATTGTATAGTTATGAAGGGAATTAC
AGTACGTTTTTAGAAGCGAAAGCACTTCGTGAAGAACAAGAACTTGCGCAGGAATCAAAACGTCAAAACTTATATCGCCG
CGAATTAGCATGGATTCGCCGTGGTGCAAAAGCTCGTTCGACTAAGCAAAAGGCACGTATTCAACGTTTTGATGAGCTAA
AAGGTCAAGAAGGCCCAGCTGCCAAACAGTCTGTTGATATTGCGCTTAGCGGTAGCCGCCTAGGGAAAAAAGTACTTGAG
TTAAAAGATGTAACGAAAAAATTTGGTGATAAAACTGTACTGAACAACTTTAATCATATTGTGAAACCAGGCGATCGTAT
CGGAATTATTGGAGCAAATGGTAGCGGAAAATCTTCGTTATTAAATATGCTTGCAGGTAAAATATCTCCTGATAGTGGTG
AAATTGAAGTTGGGCAAACAGTAAAAATTGCTTACTATACGCAAGAAAATGAAGAAATGAATTTAAATCAACGTATGATT
GAATACATTAAAGAAATTGCGGAAGTTATTCATACGACAGATGGAAAAGTAATTGGTGCGTCTCAAATGTTAGAACGTTT
CTTATTCCCACCGCATTCACATGGTACACCTCTTGGTAAATTATCTGGCGGTGAAAGAAGACGTTTATATTTATTACGTA
TATTAATGGGAGAACCGAACGTACTATTACTAGATGAGCCTACGAATGATCTAGATACACAAACATTAACTGTATTAGAA
GATTATTTAGAAGATTTTCCAGGTGTCGTTTTAACTGTATCGCATGACCGTTACTTCTTAGATAAAGTAGTAGATGAATT
GTTCATCTTTACTGGAGAAGGAGAAGTGCGCGAATTTCTAGGTAGTTATACGGATTATTTAGAAATGGAAAAAACGAGAG
AACTTATTGAGAAAGCGGAAGTACAGAAAGAGAAAAAAGTAGTAGAAGAAGCTCCGAAACAACAACGTAAGCGTAAACTT
TCATATAACGAGCAGCGCGAATGGGAAACTATTGAAGATACAATTGCGGAACTTGAAGAAAAACTAGAATCAATTGGAGA
AGAGCTTGCGAATGTTGGTTCTGATTTCACAAAAGCACAAGAATTATCTGAAGCACAGCAAAAAACAGAAGAAGAGCTAG
AAAAAACGATGGAAAGATGGAGTGAACTATCCGACATTGTTGAAGGATTAAAATAA

Upstream 100 bases:

>100_bases
ACTTAATGAATACGAATGCAGCAAAACAAGAGGCTGAAGTTCGTCATCGTTATATGGAACAGTTTATTGAACAATTTATG
AAAGAGTGGAATGCACAAAT

Downstream 100 bases:

>100_bases
AAACAAGCTGCATATATTGAAAAGTAAAGAGAAAAACTTTACACTATTGGTAGAACCTATTTTAGGAGGGAAAAAATGAG
AACATCTAATCCAATGTTGA

Product: ABC transporter, ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 631; Mature: 631

Protein sequence:

>631_residues
MKMLTVENLSKSYGEKPLFDGLSFSIAEGQRAGIIGVNGTGKSTLLKIIAGAEIPDTGDMTHSRGYTISYLSQQPEFDEQ
LTVLEQVFHGDTPLIRLLRDYEKALLHIEKDPSNEKVQEQLFAVQQRMDAMSAWEANANAKSLLTKLGITDFTATVGNLS
GGQKKRIAMAQCFIETPDLLILDEPTNHLDHETVEWLEEYLARYTGAVLLVTHDRYFLDRVTNRIFELDNGKLYSYEGNY
STFLEAKALREEQELAQESKRQNLYRRELAWIRRGAKARSTKQKARIQRFDELKGQEGPAAKQSVDIALSGSRLGKKVLE
LKDVTKKFGDKTVLNNFNHIVKPGDRIGIIGANGSGKSSLLNMLAGKISPDSGEIEVGQTVKIAYYTQENEEMNLNQRMI
EYIKEIAEVIHTTDGKVIGASQMLERFLFPPHSHGTPLGKLSGGERRRLYLLRILMGEPNVLLLDEPTNDLDTQTLTVLE
DYLEDFPGVVLTVSHDRYFLDKVVDELFIFTGEGEVREFLGSYTDYLEMEKTRELIEKAEVQKEKKVVEEAPKQQRKRKL
SYNEQREWETIEDTIAELEEKLESIGEELANVGSDFTKAQELSEAQQKTEEELEKTMERWSELSDIVEGLK

Sequences:

>Translated_631_residues
MKMLTVENLSKSYGEKPLFDGLSFSIAEGQRAGIIGVNGTGKSTLLKIIAGAEIPDTGDMTHSRGYTISYLSQQPEFDEQ
LTVLEQVFHGDTPLIRLLRDYEKALLHIEKDPSNEKVQEQLFAVQQRMDAMSAWEANANAKSLLTKLGITDFTATVGNLS
GGQKKRIAMAQCFIETPDLLILDEPTNHLDHETVEWLEEYLARYTGAVLLVTHDRYFLDRVTNRIFELDNGKLYSYEGNY
STFLEAKALREEQELAQESKRQNLYRRELAWIRRGAKARSTKQKARIQRFDELKGQEGPAAKQSVDIALSGSRLGKKVLE
LKDVTKKFGDKTVLNNFNHIVKPGDRIGIIGANGSGKSSLLNMLAGKISPDSGEIEVGQTVKIAYYTQENEEMNLNQRMI
EYIKEIAEVIHTTDGKVIGASQMLERFLFPPHSHGTPLGKLSGGERRRLYLLRILMGEPNVLLLDEPTNDLDTQTLTVLE
DYLEDFPGVVLTVSHDRYFLDKVVDELFIFTGEGEVREFLGSYTDYLEMEKTRELIEKAEVQKEKKVVEEAPKQQRKRKL
SYNEQREWETIEDTIAELEEKLESIGEELANVGSDFTKAQELSEAQQKTEEELEKTMERWSELSDIVEGLK
>Mature_631_residues
MKMLTVENLSKSYGEKPLFDGLSFSIAEGQRAGIIGVNGTGKSTLLKIIAGAEIPDTGDMTHSRGYTISYLSQQPEFDEQ
LTVLEQVFHGDTPLIRLLRDYEKALLHIEKDPSNEKVQEQLFAVQQRMDAMSAWEANANAKSLLTKLGITDFTATVGNLS
GGQKKRIAMAQCFIETPDLLILDEPTNHLDHETVEWLEEYLARYTGAVLLVTHDRYFLDRVTNRIFELDNGKLYSYEGNY
STFLEAKALREEQELAQESKRQNLYRRELAWIRRGAKARSTKQKARIQRFDELKGQEGPAAKQSVDIALSGSRLGKKVLE
LKDVTKKFGDKTVLNNFNHIVKPGDRIGIIGANGSGKSSLLNMLAGKISPDSGEIEVGQTVKIAYYTQENEEMNLNQRMI
EYIKEIAEVIHTTDGKVIGASQMLERFLFPPHSHGTPLGKLSGGERRRLYLLRILMGEPNVLLLDEPTNDLDTQTLTVLE
DYLEDFPGVVLTVSHDRYFLDKVVDELFIFTGEGEVREFLGSYTDYLEMEKTRELIEKAEVQKEKKVVEEAPKQQRKRKL
SYNEQREWETIEDTIAELEEKLESIGEELANVGSDFTKAQELSEAQQKTEEELEKTMERWSELSDIVEGLK

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=534, Percent_Identity=30.1498127340824, Blast_Score=215, Evalue=1e-55,
Organism=Homo sapiens, GI10947135, Length=558, Percent_Identity=30.4659498207885, Blast_Score=199, Evalue=6e-51,
Organism=Homo sapiens, GI69354671, Length=558, Percent_Identity=30.4659498207885, Blast_Score=199, Evalue=7e-51,
Organism=Homo sapiens, GI27881506, Length=552, Percent_Identity=28.6231884057971, Blast_Score=187, Evalue=2e-47,
Organism=Homo sapiens, GI10947137, Length=552, Percent_Identity=28.6231884057971, Blast_Score=187, Evalue=3e-47,
Organism=Escherichia coli, GI2367384, Length=521, Percent_Identity=38.3877159309021, Blast_Score=371, Evalue=1e-104,
Organism=Escherichia coli, GI1787182, Length=645, Percent_Identity=33.3333333333333, Blast_Score=346, Evalue=2e-96,
Organism=Escherichia coli, GI1789751, Length=609, Percent_Identity=31.6912972085386, Blast_Score=281, Evalue=8e-77,
Organism=Escherichia coli, GI1787041, Length=534, Percent_Identity=32.2097378277154, Blast_Score=269, Evalue=4e-73,
Organism=Escherichia coli, GI87081782, Length=535, Percent_Identity=25.2336448598131, Blast_Score=106, Evalue=4e-24,
Organism=Escherichia coli, GI48994943, Length=484, Percent_Identity=24.7933884297521, Blast_Score=93, Evalue=4e-20,
Organism=Escherichia coli, GI87081834, Length=246, Percent_Identity=30.0813008130081, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI1787029, Length=266, Percent_Identity=27.4436090225564, Blast_Score=89, Evalue=8e-19,
Organism=Escherichia coli, GI1788225, Length=261, Percent_Identity=28.735632183908, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1788165, Length=197, Percent_Identity=28.9340101522843, Blast_Score=85, Evalue=2e-17,
Organism=Escherichia coli, GI1789873, Length=244, Percent_Identity=29.0983606557377, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI87081791, Length=236, Percent_Identity=27.9661016949153, Blast_Score=80, Evalue=3e-16,
Organism=Escherichia coli, GI1789891, Length=267, Percent_Identity=25.4681647940075, Blast_Score=78, Evalue=2e-15,
Organism=Escherichia coli, GI1787164, Length=249, Percent_Identity=26.5060240963855, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI1786872, Length=259, Percent_Identity=27.027027027027, Blast_Score=76, Evalue=7e-15,
Organism=Escherichia coli, GI1788644, Length=235, Percent_Identity=31.9148936170213, Blast_Score=74, Evalue=4e-14,
Organism=Escherichia coli, GI1787089, Length=243, Percent_Identity=25.5144032921811, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1786698, Length=220, Percent_Identity=29.5454545454545, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1786398, Length=241, Percent_Identity=26.5560165975104, Blast_Score=71, Evalue=3e-13,
Organism=Escherichia coli, GI1786703, Length=224, Percent_Identity=27.2321428571429, Blast_Score=70, Evalue=6e-13,
Organism=Escherichia coli, GI1788506, Length=264, Percent_Identity=25, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI1789593, Length=252, Percent_Identity=23.8095238095238, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI1790467, Length=264, Percent_Identity=24.6212121212121, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI87082064, Length=220, Percent_Identity=30, Blast_Score=64, Evalue=3e-11,
Organism=Escherichia coli, GI1787758, Length=214, Percent_Identity=26.1682242990654, Blast_Score=63, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17559834, Length=549, Percent_Identity=29.6903460837887, Blast_Score=238, Evalue=6e-63,
Organism=Caenorhabditis elegans, GI17555318, Length=568, Percent_Identity=28.6971830985916, Blast_Score=207, Evalue=1e-53,
Organism=Caenorhabditis elegans, GI17553372, Length=539, Percent_Identity=30.9833024118738, Blast_Score=199, Evalue=5e-51,
Organism=Caenorhabditis elegans, GI193202349, Length=211, Percent_Identity=28.436018957346, Blast_Score=68, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI71992290, Length=178, Percent_Identity=27.5280898876405, Blast_Score=67, Evalue=4e-11,
Organism=Saccharomyces cerevisiae, GI6320874, Length=513, Percent_Identity=30.7992202729045, Blast_Score=211, Evalue=2e-55,
Organism=Saccharomyces cerevisiae, GI6321121, Length=529, Percent_Identity=30.0567107750473, Blast_Score=207, Evalue=5e-54,
Organism=Saccharomyces cerevisiae, GI6325030, Length=404, Percent_Identity=26.7326732673267, Blast_Score=130, Evalue=5e-31,
Organism=Saccharomyces cerevisiae, GI6324314, Length=400, Percent_Identity=27.5, Blast_Score=129, Evalue=1e-30,
Organism=Saccharomyces cerevisiae, GI6323278, Length=402, Percent_Identity=27.8606965174129, Blast_Score=125, Evalue=2e-29,
Organism=Saccharomyces cerevisiae, GI6324498, Length=176, Percent_Identity=31.25, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24641342, Length=547, Percent_Identity=29.2504570383912, Blast_Score=219, Evalue=3e-57,
Organism=Drosophila melanogaster, GI24642252, Length=558, Percent_Identity=29.5698924731183, Blast_Score=217, Evalue=2e-56,
Organism=Drosophila melanogaster, GI18859989, Length=558, Percent_Identity=29.5698924731183, Blast_Score=217, Evalue=2e-56,
Organism=Drosophila melanogaster, GI24666836, Length=546, Percent_Identity=30.2197802197802, Blast_Score=216, Evalue=4e-56,
Organism=Drosophila melanogaster, GI28574259, Length=222, Percent_Identity=30.6306306306306, Blast_Score=76, Evalue=6e-14,
Organism=Drosophila melanogaster, GI24659289, Length=177, Percent_Identity=29.9435028248588, Blast_Score=67, Evalue=5e-11,
Organism=Drosophila melanogaster, GI62484234, Length=241, Percent_Identity=28.2157676348548, Blast_Score=66, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 71608; Mature: 71608

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMLTVENLSKSYGEKPLFDGLSFSIAEGQRAGIIGVNGTGKSTLLKIIAGAEIPDTGDM
CCEEEHHHHHHHHCCCCCCCCCCEEECCCCCCCEEEECCCCHHHHHHHHHCCCCCCCCCC
THSRGYTISYLSQQPEFDEQLTVLEQVFHGDTPLIRLLRDYEKALLHIEKDPSNEKVQEQ
CCCCCCEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEECCCCCHHHHHHH
LFAVQQRMDAMSAWEANANAKSLLTKLGITDFTATVGNLSGGQKKRIAMAQCFIETPDLL
HHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEE
ILDEPTNHLDHETVEWLEEYLARYTGAVLLVTHDRYFLDRVTNRIFELDNGKLYSYEGNY
EEECCCCCCCHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHEECCCCEEEEECCCC
STFLEAKALREEQELAQESKRQNLYRRELAWIRRGAKARSTKQKARIQRFDELKGQEGPA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCC
AKQSVDIALSGSRLGKKVLELKDVTKKFGDKTVLNNFNHIVKPGDRIGIIGANGSGKSSL
CHHCEEEEECCHHHHHHHHHHHHHHHHHCCHHHHHCCHHHCCCCCEEEEEECCCCCHHHH
LNMLAGKISPDSGEIEVGQTVKIAYYTQENEEMNLNQRMIEYIKEIAEVIHTTDGKVIGA
HHHHHCCCCCCCCCEEECCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECH
SQMLERFLFPPHSHGTPLGKLSGGERRRLYLLRILMGEPNVLLLDEPTNDLDTQTLTVLE
HHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHH
DYLEDFPGVVLTVSHDRYFLDKVVDELFIFTGEGEVREFLGSYTDYLEMEKTRELIEKAE
HHHHHCCCEEEEECCCHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VQKEKKVVEEAPKQQRKRKLSYNEQREWETIEDTIAELEEKLESIGEELANVGSDFTKAQ
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
ELSEAQQKTEEELEKTMERWSELSDIVEGLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKMLTVENLSKSYGEKPLFDGLSFSIAEGQRAGIIGVNGTGKSTLLKIIAGAEIPDTGDM
CCEEEHHHHHHHHCCCCCCCCCCEEECCCCCCCEEEECCCCHHHHHHHHHCCCCCCCCCC
THSRGYTISYLSQQPEFDEQLTVLEQVFHGDTPLIRLLRDYEKALLHIEKDPSNEKVQEQ
CCCCCCEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEECCCCCHHHHHHH
LFAVQQRMDAMSAWEANANAKSLLTKLGITDFTATVGNLSGGQKKRIAMAQCFIETPDLL
HHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEE
ILDEPTNHLDHETVEWLEEYLARYTGAVLLVTHDRYFLDRVTNRIFELDNGKLYSYEGNY
EEECCCCCCCHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHEECCCCEEEEECCCC
STFLEAKALREEQELAQESKRQNLYRRELAWIRRGAKARSTKQKARIQRFDELKGQEGPA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCC
AKQSVDIALSGSRLGKKVLELKDVTKKFGDKTVLNNFNHIVKPGDRIGIIGANGSGKSSL
CHHCEEEEECCHHHHHHHHHHHHHHHHHCCHHHHHCCHHHCCCCCEEEEEECCCCCHHHH
LNMLAGKISPDSGEIEVGQTVKIAYYTQENEEMNLNQRMIEYIKEIAEVIHTTDGKVIGA
HHHHHCCCCCCCCCEEECCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECH
SQMLERFLFPPHSHGTPLGKLSGGERRRLYLLRILMGEPNVLLLDEPTNDLDTQTLTVLE
HHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHH
DYLEDFPGVVLTVSHDRYFLDKVVDELFIFTGEGEVREFLGSYTDYLEMEKTRELIEKAE
HHHHHCCCEEEEECCCHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VQKEKKVVEEAPKQQRKRKLSYNEQREWETIEDTIAELEEKLESIGEELANVGSDFTKAQ
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
ELSEAQQKTEEELEKTMERWSELSDIVEGLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141694; 9384377 [H]