Click here to switch to the map view.

The map label for this gene is ydaH [H]

Identifier: 52143236

GI number: 52143236

Start: 2124653

End: 2125450

Strand: Reverse

Name: ydaH [H]

Synonym: BCZK2002

Alternate gene names: 52143236

Gene position: 2125450-2124653 (Counterclockwise)

Preceding gene: 52143229

Following gene: 52143235

Centisome position: 40.1

GC content: 35.09

Gene sequence:

>798_bases
ATGGTAATTACGTTAATTTTTATAATGGCTTTCACGATTGTAATCCACGCAGTTGAAACAAGCTCTTATAGTATTCGATT
AGCAGGCGTTCGTTTAAAGAAGATCGCTGTTGCATTATCTGTCGTAGGAATCGTATTGCTCATTTCAAGAACGTCAAACT
TACTACAAGCCTTTTTACTTGGCGGGATTGTCGATGAAGCAAAACTAGATTCTTCTATTGATTTAGAGAATATTATGCGA
CTCGTTCTATTATCGGCTTCTGTTGGTACGTTGCTTGCGATTATACTATATCCAACTTTGACAAAACTATTTGGATGCGT
CATTCAAAATTTTGAAACAGATGGTTCATTCATTCGAATGATGAAGACGAATAACATTCAAAAATTAAAGTACACAAAAA
AATATGTACGGTTTCCAAAGTTCGAAATGATTCATAGGCTGCGTATCGGTGGTATTCCAAAACGTATTATGCTTATTAAC
ATGTTTTCTACTGCTATTTATACAGCGGGGGTTCTTTCCGCATTATATGCTTCTTATTTAATTCCAGCTTTCGCAACAAA
AGCCACTACAGCTTCTGGTCTTATTAATGGTTTTGCTACTATTTTATTAACAGTGCTATTAGATCCACGTATTGCTCTTT
TAACAGAGCGCGCTCTTCAATCAGAAGAAGGTGCTGAAGCAATGAGTAAAATGTATGCTTGGCTAATGATTTCTAGACTT
TTTGGTACATTACTAGCTCAACTGTTATTCATACCAGGTGCTTACTGGATTAAATGGATTATAAAGCTTATGAATTAA

Upstream 100 bases:

>100_bases
AAAATTACTTTTCCTATGTCACATACTTTCAGTTACAAAATGTAATAGATATGATAAAGTAAAAAAGTTACAATTATTTT
AATAGAAACTGGTGAAACAA

Downstream 100 bases:

>100_bases
TGCACTCTCTAAAAAAGAAGGTGAGATAACAAATGAAAATACAAACAGAGCAAGATATAGTTTGCTTAATAGAAAACGAC
GAATGGATGATGAATGTATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MVITLIFIMAFTIVIHAVETSSYSIRLAGVRLKKIAVALSVVGIVLLISRTSNLLQAFLLGGIVDEAKLDSSIDLENIMR
LVLLSASVGTLLAIILYPTLTKLFGCVIQNFETDGSFIRMMKTNNIQKLKYTKKYVRFPKFEMIHRLRIGGIPKRIMLIN
MFSTAIYTAGVLSALYASYLIPAFATKATTASGLINGFATILLTVLLDPRIALLTERALQSEEGAEAMSKMYAWLMISRL
FGTLLAQLLFIPGAYWIKWIIKLMN

Sequences:

>Translated_265_residues
MVITLIFIMAFTIVIHAVETSSYSIRLAGVRLKKIAVALSVVGIVLLISRTSNLLQAFLLGGIVDEAKLDSSIDLENIMR
LVLLSASVGTLLAIILYPTLTKLFGCVIQNFETDGSFIRMMKTNNIQKLKYTKKYVRFPKFEMIHRLRIGGIPKRIMLIN
MFSTAIYTAGVLSALYASYLIPAFATKATTASGLINGFATILLTVLLDPRIALLTERALQSEEGAEAMSKMYAWLMISRL
FGTLLAQLLFIPGAYWIKWIIKLMN
>Mature_265_residues
MVITLIFIMAFTIVIHAVETSSYSIRLAGVRLKKIAVALSVVGIVLLISRTSNLLQAFLLGGIVDEAKLDSSIDLENIMR
LVLLSASVGTLLAIILYPTLTKLFGCVIQNFETDGSFIRMMKTNNIQKLKYTKKYVRFPKFEMIHRLRIGGIPKRIMLIN
MFSTAIYTAGVLSALYASYLIPAFATKATTASGLINGFATILLTVLLDPRIALLTERALQSEEGAEAMSKMYAWLMISRL
FGTLLAQLLFIPGAYWIKWIIKLMN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021260 [H]

Pfam domain/function: PF10997 DUF2837 [H]

EC number: NA

Molecular weight: Translated: 29450; Mature: 29450

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVITLIFIMAFTIVIHAVETSSYSIRLAGVRLKKIAVALSVVGIVLLISRTSNLLQAFLL
CHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GGIVDEAKLDSSIDLENIMRLVLLSASVGTLLAIILYPTLTKLFGCVIQNFETDGSFIRM
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE
MKTNNIQKLKYTKKYVRFPKFEMIHRLRIGGIPKRIMLINMFSTAIYTAGVLSALYASYL
HHCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IPAFATKATTASGLINGFATILLTVLLDPRIALLTERALQSEEGAEAMSKMYAWLMISRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
FGTLLAQLLFIPGAYWIKWIIKLMN
HHHHHHHHHHCCCHHHHHHHHHHHC
>Mature Secondary Structure
MVITLIFIMAFTIVIHAVETSSYSIRLAGVRLKKIAVALSVVGIVLLISRTSNLLQAFLL
CHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GGIVDEAKLDSSIDLENIMRLVLLSASVGTLLAIILYPTLTKLFGCVIQNFETDGSFIRM
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE
MKTNNIQKLKYTKKYVRFPKFEMIHRLRIGGIPKRIMLINMFSTAIYTAGVLSALYASYL
HHCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IPAFATKATTASGLINGFATILLTVLLDPRIALLTERALQSEEGAEAMSKMYAWLMISRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
FGTLLAQLLFIPGAYWIKWIIKLMN
HHHHHHHHHHCCCHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]