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The map label for this gene is ythQ [H]

Identifier: 52143226

GI number: 52143226

Start: 2132969

End: 2134168

Strand: Direct

Name: ythQ [H]

Synonym: BCZK2012

Alternate gene names: 52143226

Gene position: 2132969-2134168 (Clockwise)

Preceding gene: 52143225

Following gene: 52143224

Centisome position: 40.24

GC content: 32.75

Gene sequence:

>1200_bases
ATGATTAAACAACAATTTTATAAAAGATTGCGTCATGAACTGGGGCGCAAATGGAAGTCCATACGTTCTATAACGGATTG
GACAGTTGCGCTATATATTATTATTCCAGCATTTATATTTATGGGGATTTATTATCGTTCACTATGGACGGAAGAATTAT
CGATGGGAGAGACTGTTTATTTCGGATTAGGTCTACTCGTATTTTATGTGATTACATATGGAAGAGGAGTTCGCTCATTT
TTTGAGCAAGCGGATAGTTTATTTTTAATTTCGTATCCCGCTCACATGCGAAAATTAATCCAGTATGGCATGACATATAC
GTTTATTCGAATAGCGATAACGAATGTAGTAGTAGTTGTTGCTATGTTACCAGTGTTGATGAAAAGTATCGGAGTGACGA
AGATACAAGTCGTATTATTTTGGCTATTCTTTACTGTATTTCGATGTATGTTATCGTTATTAACGAGATGTATTCATATA
CGTGTGGGGAAAGGATGGCTACTATGGATTATAAAAAATGTAATATTTTCTATAAGTCTATCCTTTTTTGGAGTGAGTCT
ATTTTTTATTTATAAAAATTCATTTTATTCTATACTATGTATCGGTCTATTAGTTTTTCTAATTATCGCATTGATAAAAG
AAAAACTAAATTATAGAAATTCCTTTTTTAAAGAAATTGAGAAAGAAAAAGAAGAAAGTATGCGCTGGATGAGCGGGATT
ATGCAAGTTGGTGGTCATGCAGCTAAACCGAGTAGTTCGAATAAAAAGCCGTGGATGTTTCCACGTTCTAAAAAGTTTTT
AGGGAAGAAAACTGATGATCGTATTGTTGAATCCTTTTTGAAAGAATTTTTTCGTACAAGTAGTGCACGAATATTTTATA
TTCAAATTGTATGTATAAGCGCGATAAGTATTGTTATGAGTCCGAGGTGGATTGCAGCGATTATTCTTGCATTTGCTTTA
TTTGCAATTTCCCGCTATGCACGCGATTATTGGGCTGAATTTGCGAAAAAAATGTTTCTTCATTTATATTGTGATGAAGG
CAAATTACTATTGTTAAGATGGAAGGCAGATCGCTATTTATTACTTCCAGTAATCCTTTTATATGGAATAGTTATCCTTT
CTCATTTTTATTTATTAGCAGCTGTAATTGCCGGGATTATTTTTATAGTATGGATTGGTTGGATTGTATTTTTACCATAG

Upstream 100 bases:

>100_bases
TTAGTCGCAGATGGACATTTAGAAGCAATCCAAACGTTAGCAAAAATGCCAGGGAGTTCATTATTAGACTGTTTTGATGT
AATTGTAAGGCGTGAACAGC

Downstream 100 bases:

>100_bases
AAAAAGAGCCGGAAAATGGCTCTTTTTCTAATCTGTCACACATTGATAAAGAAAATATGCTAAAACGAGTATGCTTGCGG
CGGAATACATGACATCTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 399; Mature: 399

Protein sequence:

>399_residues
MIKQQFYKRLRHELGRKWKSIRSITDWTVALYIIIPAFIFMGIYYRSLWTEELSMGETVYFGLGLLVFYVITYGRGVRSF
FEQADSLFLISYPAHMRKLIQYGMTYTFIRIAITNVVVVVAMLPVLMKSIGVTKIQVVLFWLFFTVFRCMLSLLTRCIHI
RVGKGWLLWIIKNVIFSISLSFFGVSLFFIYKNSFYSILCIGLLVFLIIALIKEKLNYRNSFFKEIEKEKEESMRWMSGI
MQVGGHAAKPSSSNKKPWMFPRSKKFLGKKTDDRIVESFLKEFFRTSSARIFYIQIVCISAISIVMSPRWIAAIILAFAL
FAISRYARDYWAEFAKKMFLHLYCDEGKLLLLRWKADRYLLLPVILLYGIVILSHFYLLAAVIAGIIFIVWIGWIVFLP

Sequences:

>Translated_399_residues
MIKQQFYKRLRHELGRKWKSIRSITDWTVALYIIIPAFIFMGIYYRSLWTEELSMGETVYFGLGLLVFYVITYGRGVRSF
FEQADSLFLISYPAHMRKLIQYGMTYTFIRIAITNVVVVVAMLPVLMKSIGVTKIQVVLFWLFFTVFRCMLSLLTRCIHI
RVGKGWLLWIIKNVIFSISLSFFGVSLFFIYKNSFYSILCIGLLVFLIIALIKEKLNYRNSFFKEIEKEKEESMRWMSGI
MQVGGHAAKPSSSNKKPWMFPRSKKFLGKKTDDRIVESFLKEFFRTSSARIFYIQIVCISAISIVMSPRWIAAIILAFAL
FAISRYARDYWAEFAKKMFLHLYCDEGKLLLLRWKADRYLLLPVILLYGIVILSHFYLLAAVIAGIIFIVWIGWIVFLP
>Mature_399_residues
MIKQQFYKRLRHELGRKWKSIRSITDWTVALYIIIPAFIFMGIYYRSLWTEELSMGETVYFGLGLLVFYVITYGRGVRSF
FEQADSLFLISYPAHMRKLIQYGMTYTFIRIAITNVVVVVAMLPVLMKSIGVTKIQVVLFWLFFTVFRCMLSLLTRCIHI
RVGKGWLLWIIKNVIFSISLSFFGVSLFFIYKNSFYSILCIGLLVFLIIALIKEKLNYRNSFFKEIEKEKEESMRWMSGI
MQVGGHAAKPSSSNKKPWMFPRSKKFLGKKTDDRIVESFLKEFFRTSSARIFYIQIVCISAISIVMSPRWIAAIILAFAL
FAISRYARDYWAEFAKKMFLHLYCDEGKLLLLRWKADRYLLLPVILLYGIVILSHFYLLAAVIAGIIFIVWIGWIVFLP

Specific function: Unknown

COG id: COG4473

COG function: function code U; Predicted ABC-type exoprotein transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010288 [H]

Pfam domain/function: PF05975 EcsB [H]

EC number: NA

Molecular weight: Translated: 46792; Mature: 46792

Theoretical pI: Translated: 10.44; Mature: 10.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIKQQFYKRLRHELGRKWKSIRSITDWTVALYIIIPAFIFMGIYYRSLWTEELSMGETVY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
FGLGLLVFYVITYGRGVRSFFEQADSLFLISYPAHMRKLIQYGMTYTFIRIAITNVVVVV
HHHHHHHHHHHHHCHHHHHHHHCCCCEEEEECCHHHHHHHHHCHHHHHHHHHHHHHHHHH
AMLPVLMKSIGVTKIQVVLFWLFFTVFRCMLSLLTRCIHIRVGKGWLLWIIKNVIFSISL
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
SFFGVSLFFIYKNSFYSILCIGLLVFLIIALIKEKLNYRNSFFKEIEKEKEESMRWMSGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MQVGGHAAKPSSSNKKPWMFPRSKKFLGKKTDDRIVESFLKEFFRTSSARIFYIQIVCIS
HHHCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHH
AISIVMSPRWIAAIILAFALFAISRYARDYWAEFAKKMFLHLYCDEGKLLLLRWKADRYL
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEECCCCHH
LLPVILLYGIVILSHFYLLAAVIAGIIFIVWIGWIVFLP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]