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The map label for this gene is yfiY [H]

Identifier: 52143200

GI number: 52143200

Start: 2157669

End: 2158631

Strand: Direct

Name: yfiY [H]

Synonym: BCZK2036

Alternate gene names: 52143200

Gene position: 2157669-2158631 (Clockwise)

Preceding gene: 52143202

Following gene: 52143201

Centisome position: 40.7

GC content: 34.06

Gene sequence:

>963_bases
ATGACACGCACTAAAAATATGCTTATATTTTGCATTATGCTACTAACAATCATAATCGCAGGGTGTAGTAAAGAAGAAAA
GAAAGAAAATGATACATCAGCTAAAGCGAAAGATTCGTATACGATAAAACATGCAATGGGCGAAACGACAGTGAATGGTA
CGCCAAAAAGAGTTGTTGTTTTAACAAATGAGGGCGCTGAGGCACTTTTATCTGTTGGAGTAACGCCAGTTGGAACGACA
AAACCACGAGCTGGTGATGAATGGTATCCTCATTTAGCGAAAGAGTTAAAAAATACGAAAGTAGTAGGAACTGAGCGTGA
CATTAATTTAGAAGCAGTAATGAAGCTTCAGCCGGATTTAATTATCGGAAATAAAATGCGTCACGAAAAAATATACGAGC
AGTTAAAAGAAATCGCGCCAACAGTATATGCTGAAACATTACGCGGTGATTGGAAAGAAAACTTCACACTTTATACAAAA
GCTGTAAATAAAGAAAAAGAAGGGCAAAATGCTCTAAATGATTATAAAAAGCGTATTGTAGCAATAAAAGGACAATTAGG
TGATAAAATTAATTCTAAAGTTTCCATTATTCGCTTCGTCCCTGGTGATGTTCGTATTTATCAAAAAAATTCATTCTCAG
GTGTTGTATTAAATGATATTGGATTTAAACGACCACCATTACAAGATAAAGATGAATTTGCAATTAAAGGAATTACAAAA
GAGCAAATTCCAAATATGGACGGGGACTATTTATTCTATTTCACATCAGATAAAGACGCGGATAAGAATAATGAAGGAAA
CACATTAGCAAAAGAATGGACAGAAGATCCACTCTTTAAGCAACTGCAGGCTTCTAAAGATAATAAAGTATTCCAAGTAG
ATGAAGTAATTTGGAATACAGCAGGTGGTATTGTAGCTGCAAACCTTATGTTAGATGATATTGAAAAATATTTTATGAAG
TAA

Upstream 100 bases:

>100_bases
TATATATTGAAAAAGTTTTCTGATATATCTATTGACAATGTATGAGATATACATTAATCTTTAAGGTGTAAATGATAATC
AATTTCAACTAGGAGGACTT

Downstream 100 bases:

>100_bases
GTAATTTAACGAGTGCATCACTTTAAATAGGTGATGCACTTTTTATTTTATCAAAATACAGAAAATTCTTTCTTTTGAAC
GTGCATAAGTTGTACAATTA

Product: iron(III) dicitrate-binding protein

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 319

Protein sequence:

>320_residues
MTRTKNMLIFCIMLLTIIIAGCSKEEKKENDTSAKAKDSYTIKHAMGETTVNGTPKRVVVLTNEGAEALLSVGVTPVGTT
KPRAGDEWYPHLAKELKNTKVVGTERDINLEAVMKLQPDLIIGNKMRHEKIYEQLKEIAPTVYAETLRGDWKENFTLYTK
AVNKEKEGQNALNDYKKRIVAIKGQLGDKINSKVSIIRFVPGDVRIYQKNSFSGVVLNDIGFKRPPLQDKDEFAIKGITK
EQIPNMDGDYLFYFTSDKDADKNNEGNTLAKEWTEDPLFKQLQASKDNKVFQVDEVIWNTAGGIVAANLMLDDIEKYFMK

Sequences:

>Translated_320_residues
MTRTKNMLIFCIMLLTIIIAGCSKEEKKENDTSAKAKDSYTIKHAMGETTVNGTPKRVVVLTNEGAEALLSVGVTPVGTT
KPRAGDEWYPHLAKELKNTKVVGTERDINLEAVMKLQPDLIIGNKMRHEKIYEQLKEIAPTVYAETLRGDWKENFTLYTK
AVNKEKEGQNALNDYKKRIVAIKGQLGDKINSKVSIIRFVPGDVRIYQKNSFSGVVLNDIGFKRPPLQDKDEFAIKGITK
EQIPNMDGDYLFYFTSDKDADKNNEGNTLAKEWTEDPLFKQLQASKDNKVFQVDEVIWNTAGGIVAANLMLDDIEKYFMK
>Mature_319_residues
TRTKNMLIFCIMLLTIIIAGCSKEEKKENDTSAKAKDSYTIKHAMGETTVNGTPKRVVVLTNEGAEALLSVGVTPVGTTK
PRAGDEWYPHLAKELKNTKVVGTERDINLEAVMKLQPDLIIGNKMRHEKIYEQLKEIAPTVYAETLRGDWKENFTLYTKA
VNKEKEGQNALNDYKKRIVAIKGQLGDKINSKVSIIRFVPGDVRIYQKNSFSGVVLNDIGFKRPPLQDKDEFAIKGITKE
QIPNMDGDYLFYFTSDKDADKNNEGNTLAKEWTEDPLFKQLQASKDNKVFQVDEVIWNTAGGIVAANLMLDDIEKYFMK

Specific function: Part of the ABC transporter complex yfiYZ/yfhA/yusV involved in import of the iron-hydroxamate siderophores schizokinen, arthrobactin and corprogen. Binds the siderophores and delivers them to the surface of yfiZ/yfhA (Probable) [H]

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable). Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082411, Length=283, Percent_Identity=27.208480565371, Blast_Score=110, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 36121; Mature: 35990

Theoretical pI: Translated: 8.55; Mature: 8.55

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRTKNMLIFCIMLLTIIIAGCSKEEKKENDTSAKAKDSYTIKHAMGETTVNGTPKRVVV
CCCCHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCEEEHHHCCCCCCCCCCCEEEE
LTNEGAEALLSVGVTPVGTTKPRAGDEWYPHLAKELKNTKVVGTERDINLEAVMKLQPDL
EECCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEECCCCCCCHHHHEEECCCE
IIGNKMRHEKIYEQLKEIAPTVYAETLRGDWKENFTLYTKAVNKEKEGQNALNDYKKRIV
EECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHCCCCCCHHHHHHHHHHEE
AIKGQLGDKINSKVSIIRFVPGDVRIYQKNSFSGVVLNDIGFKRPPLQDKDEFAIKGITK
EEECHHCCCCCCCEEEEEECCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCEEECCCH
EQIPNMDGDYLFYFTSDKDADKNNEGNTLAKEWTEDPLFKQLQASKDNKVFQVDEVIWNT
HHCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHCCCHHHHHHHCCCCCCEEEHHHHHHHC
AGGIVAANLMLDDIEKYFMK
CCCCEEHHHHHHHHHHHHCC
>Mature Secondary Structure 
TRTKNMLIFCIMLLTIIIAGCSKEEKKENDTSAKAKDSYTIKHAMGETTVNGTPKRVVV
CCCHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCEEEHHHCCCCCCCCCCCEEEE
LTNEGAEALLSVGVTPVGTTKPRAGDEWYPHLAKELKNTKVVGTERDINLEAVMKLQPDL
EECCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEECCCCCCCHHHHEEECCCE
IIGNKMRHEKIYEQLKEIAPTVYAETLRGDWKENFTLYTKAVNKEKEGQNALNDYKKRIV
EECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHCCCCCCHHHHHHHHHHEE
AIKGQLGDKINSKVSIIRFVPGDVRIYQKNSFSGVVLNDIGFKRPPLQDKDEFAIKGITK
EEECHHCCCCCCCEEEEEECCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCEEECCCH
EQIPNMDGDYLFYFTSDKDADKNNEGNTLAKEWTEDPLFKQLQASKDNKVFQVDEVIWNT
HHCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHCCCHHHHHHHCCCCCCEEEHHHHHHHC
AGGIVAANLMLDDIEKYFMK
CCCCEEHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377 [H]