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The map label for this gene is oppC [H]

Identifier: 52143088

GI number: 52143088

Start: 2282103

End: 2283104

Strand: Direct

Name: oppC [H]

Synonym: BCZK2151

Alternate gene names: 52143088

Gene position: 2282103-2283104 (Clockwise)

Preceding gene: 52143087

Following gene: 52143084

Centisome position: 43.05

GC content: 35.83

Gene sequence:

>1002_bases
ATGTGGCAAGTTGTAAAAAGAGATGTGAGATTTTGGATAGGTATTACTTTTTTGAGTGTACTAATGATTGTTAGTATTGG
ATATACGGTGTTTTTTGATGGGTATATTCGCGAACTTACGATGTTGTATAACGAAAAAGGAGAATTAGAAGCAGCTCCAT
TTGCACCATCAAGTAAATTTTGGTTTGGAAGTGATGTGAAAGGACGCGATCTTGTTCAATTAATAATAGAAGGCGCGAAA
TGGACAGTTGGAGCGAGTATAATTATAGCGATTTTACGAGTTATAGTTGGAGGGGGATTTGGTTTACTTCTTGGTATGTA
TGGAAAACGTTCTTTCACAGTTATTTTATCCTTTTTTGATCCTTTTAGTATTGTACCGATGGTTATGATTTCTTATTTTA
TGTTAAATGAAGTTTTGACGTTTGACAGTGGAGCGGAAGTTGTGCCGTTGTATTTGCGGGTGGCATTTCAAATTATAGTC
CTTGTATGTCTTGCTGTACCAACAGTGATGTTGTATGTAGCGCAAGAAGTAAAACGTATTAAGAAAGAAGAATTTATGTT
GGCAGCTACTGTGCTTGGCGGGAGTAAGTGGCAGAGGTTGAAACGCCATATATGGCCGCATATGTTACCATCATTTCTTT
TATTAGTAGCTCAACAATTTGTAAGTGTACTATTACTTCTTTTACACCTTGGATTACTTAAGTTGTTTTTTGGTGGAACG
ATATTATTTGGATTAGATGCAGATAGTGTAACAAAGGAATGGACAGGTCTAATTGGTCAAAATTTCCGTCACTTAACTAC
ACATACATGGATAGTACTTATACCGATTGCTTTTTATAGTATGACAATTCTCGCAGGAAATCTAGTTAGTAATAGTATGC
AAGATGCGATTAAGTTAGGAAATGCGAGAAGGCCAGAGCGGGAAGGTAGAGAAGTGAAAGTAGAGAAACAAGTACAACCA
ACTACGAATGACTTTTCTTTTTATAGAGAGATACAAAAATAA

Upstream 100 bases:

>100_bases
ATATTTACAGTGAGTCTAGTAATATTATACGTACCGCTTTTTATACTATTTCGTATATTACATACGCTTTTAAAAAATGT
TATAAAGGAGCGTGTGTAAC

Downstream 100 bases:

>100_bases
AAAAAGATAGCTGAAGACAAATCGTTTTCAGCTATCTTTTTTCGTTTAAAGTGGTGGTAAATCAATCTTACCTTCTTCAA
ATAATTCTTTAATCATATGC

Product: oligopeptide transport system, permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MWQVVKRDVRFWIGITFLSVLMIVSIGYTVFFDGYIRELTMLYNEKGELEAAPFAPSSKFWFGSDVKGRDLVQLIIEGAK
WTVGASIIIAILRVIVGGGFGLLLGMYGKRSFTVILSFFDPFSIVPMVMISYFMLNEVLTFDSGAEVVPLYLRVAFQIIV
LVCLAVPTVMLYVAQEVKRIKKEEFMLAATVLGGSKWQRLKRHIWPHMLPSFLLLVAQQFVSVLLLLLHLGLLKLFFGGT
ILFGLDADSVTKEWTGLIGQNFRHLTTHTWIVLIPIAFYSMTILAGNLVSNSMQDAIKLGNARRPEREGREVKVEKQVQP
TTNDFSFYREIQK

Sequences:

>Translated_333_residues
MWQVVKRDVRFWIGITFLSVLMIVSIGYTVFFDGYIRELTMLYNEKGELEAAPFAPSSKFWFGSDVKGRDLVQLIIEGAK
WTVGASIIIAILRVIVGGGFGLLLGMYGKRSFTVILSFFDPFSIVPMVMISYFMLNEVLTFDSGAEVVPLYLRVAFQIIV
LVCLAVPTVMLYVAQEVKRIKKEEFMLAATVLGGSKWQRLKRHIWPHMLPSFLLLVAQQFVSVLLLLLHLGLLKLFFGGT
ILFGLDADSVTKEWTGLIGQNFRHLTTHTWIVLIPIAFYSMTILAGNLVSNSMQDAIKLGNARRPEREGREVKVEKQVQP
TTNDFSFYREIQK
>Mature_333_residues
MWQVVKRDVRFWIGITFLSVLMIVSIGYTVFFDGYIRELTMLYNEKGELEAAPFAPSSKFWFGSDVKGRDLVQLIIEGAK
WTVGASIIIAILRVIVGGGFGLLLGMYGKRSFTVILSFFDPFSIVPMVMISYFMLNEVLTFDSGAEVVPLYLRVAFQIIV
LVCLAVPTVMLYVAQEVKRIKKEEFMLAATVLGGSKWQRLKRHIWPHMLPSFLLLVAQQFVSVLLLLLHLGLLKLFFGGT
ILFGLDADSVTKEWTGLIGQNFRHLTTHTWIVLIPIAFYSMTILAGNLVSNSMQDAIKLGNARRPEREGREVKVEKQVQP
TTNDFSFYREIQK

Specific function: Part of the ABC transporter complex ddpABCDF, which is probably involved in D,D-dipeptide transport. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787760, Length=264, Percent_Identity=22.3484848484848, Blast_Score=75, Evalue=6e-15,
Organism=Escherichia coli, GI1787054, Length=243, Percent_Identity=23.0452674897119, Blast_Score=66, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 37746; Mature: 37746

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: PS00141 ASP_PROTEASE ; PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCCCCCEEECCCCCCCCCHHHHHHHHCC
>Mature Secondary Structure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CCCCCCCCCCCEEECCCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 9751644 [H]