Click here to switch to the map view.

The map label for this gene is 52143033

Identifier: 52143033

GI number: 52143033

Start: 2332923

End: 2334233

Strand: Direct

Name: 52143033

Synonym: BCZK2205

Alternate gene names: NA

Gene position: 2332923-2334233 (Clockwise)

Preceding gene: 52143034

Following gene: 52143032

Centisome position: 44.01

GC content: 37.3

Gene sequence:

>1311_bases
ATGAAGAAATTTGATATAGCAATTGTTGGTGGGGGCCTTGCTGGATTAACAGCATCTATATATTTAGCGAAAGCTGGAAG
GAAAGTGATTGTGTTAGAAAAGTCCAGTCGATTTGGTGGTCGAGGGATGACTATAAATAAAAATGGGATCTGTATGAACC
TTGGTGCGCACGCCTTATATAGAGGAGGAGCAGCATTTCTAACTTTTAATGAGCTCGGTATGAGTCTACCGGGTGGAATA
CCATCTACAAAAGCACATGGAATATGGAAAAGGAATATATTCACCATCCCAACAGATTTTCGCTCAATTTTATTAACACC
ACTACTTTCGTGGTCTGCAAAAGTACAATTCTTACGTCTAATGATTCGTTTAGGGAATTTAAATATAGGAGAAGTTCCAA
AAATGAGTCTAACTACATGGACAGAAAATGAAATAAAAGATCCAATGGTTCGAAATATATTTTATGCATTATGCCGAACA
ACAACATATACGTTTGCTCCTACAATACAATTGGCATCATCTGTACTAAAGCAAATACAGCTTTCAATAAAAGAAGGGGT
ATTTTATGTAGATGGTGGCTGGGAGACGATAATAACAAAATTAAGAGACATAGCGAATCATGTCGGGGTGCAATTTTTGG
CTAAAAAGCATGTTTTGGAAATAGAGCATTACGAAGATAAACAAAGAATATATTGTTTTGACGATGAGGTATTTGAAGTA
GGTACAGTCATTGTGGCGACTCCACCGAAAGAAGCTTGTAACATAATAAAAGGTGCGGAAGGAACGAGTTTGCAGAGATG
GAGTGAACAATCGATACCGGTTACTGTTACTGCATTAGATATTGGTTTGAGACGATTACCTAATCCGACACATCAATTTG
CATTAGGGTTAGATCAACCTATATTTTTCACGAATCAATCAAGAGCAGCTAAATTAAGTGATGATGGATCAATTGCTGTG
AGTTTAATTAAGTACCAGAATCCTGCACTAGAGATGAAACATACTCATGAAGATAAAGAACAGTTAGAAAGTACGATGGA
TTTGTTACATCCAAATTGGAAAAGAGAAGTTGTTGCACAGCAATATTTACCGACAATAAAGGTAGTATATGATTTTCCTC
ATATTAATCGATTTGAAACCCCAGGTCCTAATATCCCTGAAATGCCAGGTGTTTACGTTGCAGGTGATTGGGCTGGGCAT
GATGAAATATTAGCTGATGCTGCAGTAGCAAGCGGAAAACGTGCAGCGTTACACATTTTAAAGCAATTAGAAAGTGAGGC
AGTTCATCATGGAAACGGAGCAATTATATGA

Upstream 100 bases:

>100_bases
AAAATAATGAAATTAAATAGACGAGTAAAAATATATTTTTATGTCACATCCCTCTTTAGTCGTTCGTCTTGTATGTAGAA
CGATAAGGAGGGATTTTATT

Downstream 100 bases:

>100_bases
AGCGTATCAACCATTATTATTTTCATTAGCATATAGAATCCTTGGGAGTGTTATGGATGCTGAGGATATCGTTCAGGATG
TATTTATCTCATTAAATAAT

Product: phytoene dehydrogenase related enzyme

Products: NA

Alternate protein names: FAD Dependent Oxidoreductase; FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Phytoene Dehydrogenase ; Dehydrogenase; Amine Oxidase Flavin-Containing

Number of amino acids: Translated: 436; Mature: 436

Protein sequence:

>436_residues
MKKFDIAIVGGGLAGLTASIYLAKAGRKVIVLEKSSRFGGRGMTINKNGICMNLGAHALYRGGAAFLTFNELGMSLPGGI
PSTKAHGIWKRNIFTIPTDFRSILLTPLLSWSAKVQFLRLMIRLGNLNIGEVPKMSLTTWTENEIKDPMVRNIFYALCRT
TTYTFAPTIQLASSVLKQIQLSIKEGVFYVDGGWETIITKLRDIANHVGVQFLAKKHVLEIEHYEDKQRIYCFDDEVFEV
GTVIVATPPKEACNIIKGAEGTSLQRWSEQSIPVTVTALDIGLRRLPNPTHQFALGLDQPIFFTNQSRAAKLSDDGSIAV
SLIKYQNPALEMKHTHEDKEQLESTMDLLHPNWKREVVAQQYLPTIKVVYDFPHINRFETPGPNIPEMPGVYVAGDWAGH
DEILADAAVASGKRAALHILKQLESEAVHHGNGAII

Sequences:

>Translated_436_residues
MKKFDIAIVGGGLAGLTASIYLAKAGRKVIVLEKSSRFGGRGMTINKNGICMNLGAHALYRGGAAFLTFNELGMSLPGGI
PSTKAHGIWKRNIFTIPTDFRSILLTPLLSWSAKVQFLRLMIRLGNLNIGEVPKMSLTTWTENEIKDPMVRNIFYALCRT
TTYTFAPTIQLASSVLKQIQLSIKEGVFYVDGGWETIITKLRDIANHVGVQFLAKKHVLEIEHYEDKQRIYCFDDEVFEV
GTVIVATPPKEACNIIKGAEGTSLQRWSEQSIPVTVTALDIGLRRLPNPTHQFALGLDQPIFFTNQSRAAKLSDDGSIAV
SLIKYQNPALEMKHTHEDKEQLESTMDLLHPNWKREVVAQQYLPTIKVVYDFPHINRFETPGPNIPEMPGVYVAGDWAGH
DEILADAAVASGKRAALHILKQLESEAVHHGNGAII
>Mature_436_residues
MKKFDIAIVGGGLAGLTASIYLAKAGRKVIVLEKSSRFGGRGMTINKNGICMNLGAHALYRGGAAFLTFNELGMSLPGGI
PSTKAHGIWKRNIFTIPTDFRSILLTPLLSWSAKVQFLRLMIRLGNLNIGEVPKMSLTTWTENEIKDPMVRNIFYALCRT
TTYTFAPTIQLASSVLKQIQLSIKEGVFYVDGGWETIITKLRDIANHVGVQFLAKKHVLEIEHYEDKQRIYCFDDEVFEV
GTVIVATPPKEACNIIKGAEGTSLQRWSEQSIPVTVTALDIGLRRLPNPTHQFALGLDQPIFFTNQSRAAKLSDDGSIAV
SLIKYQNPALEMKHTHEDKEQLESTMDLLHPNWKREVVAQQYLPTIKVVYDFPHINRFETPGPNIPEMPGVYVAGDWAGH
DEILADAAVASGKRAALHILKQLESEAVHHGNGAII

Specific function: Unknown

COG id: COG1233

COG function: function code Q; Phytoene dehydrogenase and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48314; Mature: 48314

Theoretical pI: Translated: 8.57; Mature: 8.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFDIAIVGGGLAGLTASIYLAKAGRKVIVLEKSSRFGGRGMTINKNGICMNLGAHALY
CCEEEEEEECCCHHHHHHHEEEECCCCEEEEEECCCCCCCCCEEECCCCEEEECCCHHHH
RGGAAFLTFNELGMSLPGGIPSTKAHGIWKRNIFTIPTDFRSILLTPLLSWSAKVQFLRL
CCCEEEEEEHHCCCCCCCCCCCCCCCCEEECCEEECCHHHHHHHHHHHHHHHHHHHHHHH
MIRLGNLNIGEVPKMSLTTWTENEIKDPMVRNIFYALCRTTTYTFAPTIQLASSVLKQIQ
HHHHCCCCCCCCCCCEEEECCCHHHCCHHHHHHHHHHHHHCCEEECHHHHHHHHHHHHHH
LSIKEGVFYVDGGWETIITKLRDIANHVGVQFLAKKHVLEIEHYEDKQRIYCFDDEVFEV
HHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCEEEEECCCEEEE
GTVIVATPPKEACNIIKGAEGTSLQRWSEQSIPVTVTALDIGLRRLPNPTHQFALGLDQP
CEEEEECCCHHHHHHHCCCCCCCHHHCCCCCCCEEEEEEEHHHHHCCCHHHHHEECCCCC
IFFTNQSRAAKLSDDGSIAVSLIKYQNPALEMKHTHEDKEQLESTMDLLHPNWKREVVAQ
EEEECCCCCEECCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHH
QYLPTIKVVYDFPHINRFETPGPNIPEMPGVYVAGDWAGHDEILADAAVASGKRAALHIL
HCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCHHHHHHH
KQLESEAVHHGNGAII
HHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKKFDIAIVGGGLAGLTASIYLAKAGRKVIVLEKSSRFGGRGMTINKNGICMNLGAHALY
CCEEEEEEECCCHHHHHHHEEEECCCCEEEEEECCCCCCCCCEEECCCCEEEECCCHHHH
RGGAAFLTFNELGMSLPGGIPSTKAHGIWKRNIFTIPTDFRSILLTPLLSWSAKVQFLRL
CCCEEEEEEHHCCCCCCCCCCCCCCCCEEECCEEECCHHHHHHHHHHHHHHHHHHHHHHH
MIRLGNLNIGEVPKMSLTTWTENEIKDPMVRNIFYALCRTTTYTFAPTIQLASSVLKQIQ
HHHHCCCCCCCCCCCEEEECCCHHHCCHHHHHHHHHHHHHCCEEECHHHHHHHHHHHHHH
LSIKEGVFYVDGGWETIITKLRDIANHVGVQFLAKKHVLEIEHYEDKQRIYCFDDEVFEV
HHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCEEEEECCCEEEE
GTVIVATPPKEACNIIKGAEGTSLQRWSEQSIPVTVTALDIGLRRLPNPTHQFALGLDQP
CEEEEECCCHHHHHHHCCCCCCCHHHCCCCCCCEEEEEEEHHHHHCCCHHHHHEECCCCC
IFFTNQSRAAKLSDDGSIAVSLIKYQNPALEMKHTHEDKEQLESTMDLLHPNWKREVVAQ
EEEECCCCCEECCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHH
QYLPTIKVVYDFPHINRFETPGPNIPEMPGVYVAGDWAGHDEILADAAVASGKRAALHIL
HCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCHHHHHHH
KQLESEAVHHGNGAII
HHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA