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The map label for this gene is pepF [H]

Identifier: 52142642

GI number: 52142642

Start: 2715282

End: 2716865

Strand: Reverse

Name: pepF [H]

Synonym: BCZK2599

Alternate gene names: 52142642

Gene position: 2716865-2715282 (Counterclockwise)

Preceding gene: 52142641

Following gene: 52142644

Centisome position: 51.25

GC content: 32.01

Gene sequence:

>1584_bases
ATGCATGAAATTGCTAGGTGGGATTTAGATCGATTATATACGTATGGAGACATTATACTTCCAATATTGGAGTTAAAAGG
GCAATATATGGTGACAAAAGATGTAGAAAACCTTTCAAAACTTATTCAAGCTATTGAAAAAGCAGAATACTATTTGTACT
GCCGATCAGCTGAAGAAAGTGTTTCATCTGACATTACTAGATTGACTATGAAAGTAAAGGAACTAAAAAGTGAAGTGCAG
CAAGTCATACAGCAAAGTGAAGTGGAAATTACCGATAATACTAGGCTAATAAAAGATGAACTTCATGCGTGGGAAAATAT
GTACATACAATTAAGGGATAGGATAGAAATAGAGCACAATAATAAGCAATTATCATTTGGACAAGCAAATCATGTTGCAA
TGAATAGTGATGATGAAAAGGAAAGACTAGAAGTATTCGAGTCATTAATATGTGCTTTACATAAGGAGAAAGAAATTTTT
GCTACTGTATTAAATCAAATAGGAAGATTGCGTAATACAAAGGGCAATGAATTAGAAGATAGAGAGATTTTAGCAAGGTC
CCTTCATACGAATGGTATTTCAGAAACTGTATTATTACAAATATGGAATGCGACAGAAGAAAACCTAGATAAATTAGTAA
GTGCTTTAAACGTGTATAAAAAAGGAAAAACTTCGATAACATGGCATGAACTTATGACAGTAAAGGAAAATAATGAGGTT
AGTATTCCTTTTTCAGTAGCAGTACAAAACATATACGGTGCATTTAAAAATACAGATGAAGAATTAGCAGAATTTGCACG
TAATGCGATAGAAAGTGGTTGGGTAGATGCAGAACCGAGAGAGAATAAACCCCCAGGTGGATTTTGCGCTCCTTTTTTCA
GTGAAAAAGAATCTCGAATCTCTATGCGTTATGACGGAAGTATCGATAGTGTAAGAATACTTGCCCACGAACTAGGACAT
GCTTGGCATTTTTATAATATGAGTTTTGAGCAATCCTCTTCTTTTTTAGATGATTATTTGCCAATGAGTACAGCTGAATC
AGCGTCTATTTTCTTTGAAACGTTGCTTATAAATTATCTAATTCAAACAACAGATAGTATAGATATAAAAAAGGCATTGC
TTAGCTGGAAAATAAGAAACTGTTTTAATTATGTAATGGCAATTCGAGCATCGTTCGAATTTGAGAAGAACTTTTATGAA
AAATGTAAAGAAAGTCCTTTAAGTGCTGATGAAATCGAGAAATTATCTATATCAGCGCAAGAAAAAGCATATGGGAATGC
ATTATCAAAATATCAGCCATTTGTTTGGATGAAATATGTCCAGTTTTATATAGCAGATGTTCCTTTTTATAATTATCCAT
ACACATTTGGATATTTAGTTAGTTTTAGTTTATTAGAAATAGCTAAAGAAAATAAAAGCACGTTTCATTCGAAGTATAAA
GAGTTTTTAAGAGAAACTGGAAAGGCTCCAGTGGAAGAGCTTATAAAAAAACATTTTGAAATAGATATAATAAGCTCTGC
ATTCTGGGATAAAGCTTTTAAACAAATTTCTAAAGATATTGATGCATATTTGAGGCTTATATAA

Upstream 100 bases:

>100_bases
AAATCTAAATATTTAAAGATATTAAATTCTTTTCGTTTCATATATAATTATGAAGGGGTAATATCTGTAACTATTTGTAA
AAATAGGGGGCGGCTATAAA

Downstream 100 bases:

>100_bases
GGGGAGAGTATAGTGGATCACCAACTTATAAAGGGAATACCTTTTTCAACTTTAGAATATGCAAAAGCTATAAGTTTATT
AAAAGGTTGGCTACATGAAA

Product: oligoendopeptidase F

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 527; Mature: 527

Protein sequence:

>527_residues
MHEIARWDLDRLYTYGDIILPILELKGQYMVTKDVENLSKLIQAIEKAEYYLYCRSAEESVSSDITRLTMKVKELKSEVQ
QVIQQSEVEITDNTRLIKDELHAWENMYIQLRDRIEIEHNNKQLSFGQANHVAMNSDDEKERLEVFESLICALHKEKEIF
ATVLNQIGRLRNTKGNELEDREILARSLHTNGISETVLLQIWNATEENLDKLVSALNVYKKGKTSITWHELMTVKENNEV
SIPFSVAVQNIYGAFKNTDEELAEFARNAIESGWVDAEPRENKPPGGFCAPFFSEKESRISMRYDGSIDSVRILAHELGH
AWHFYNMSFEQSSSFLDDYLPMSTAESASIFFETLLINYLIQTTDSIDIKKALLSWKIRNCFNYVMAIRASFEFEKNFYE
KCKESPLSADEIEKLSISAQEKAYGNALSKYQPFVWMKYVQFYIADVPFYNYPYTFGYLVSFSLLEIAKENKSTFHSKYK
EFLRETGKAPVEELIKKHFEIDIISSAFWDKAFKQISKDIDAYLRLI

Sequences:

>Translated_527_residues
MHEIARWDLDRLYTYGDIILPILELKGQYMVTKDVENLSKLIQAIEKAEYYLYCRSAEESVSSDITRLTMKVKELKSEVQ
QVIQQSEVEITDNTRLIKDELHAWENMYIQLRDRIEIEHNNKQLSFGQANHVAMNSDDEKERLEVFESLICALHKEKEIF
ATVLNQIGRLRNTKGNELEDREILARSLHTNGISETVLLQIWNATEENLDKLVSALNVYKKGKTSITWHELMTVKENNEV
SIPFSVAVQNIYGAFKNTDEELAEFARNAIESGWVDAEPRENKPPGGFCAPFFSEKESRISMRYDGSIDSVRILAHELGH
AWHFYNMSFEQSSSFLDDYLPMSTAESASIFFETLLINYLIQTTDSIDIKKALLSWKIRNCFNYVMAIRASFEFEKNFYE
KCKESPLSADEIEKLSISAQEKAYGNALSKYQPFVWMKYVQFYIADVPFYNYPYTFGYLVSFSLLEIAKENKSTFHSKYK
EFLRETGKAPVEELIKKHFEIDIISSAFWDKAFKQISKDIDAYLRLI
>Mature_527_residues
MHEIARWDLDRLYTYGDIILPILELKGQYMVTKDVENLSKLIQAIEKAEYYLYCRSAEESVSSDITRLTMKVKELKSEVQ
QVIQQSEVEITDNTRLIKDELHAWENMYIQLRDRIEIEHNNKQLSFGQANHVAMNSDDEKERLEVFESLICALHKEKEIF
ATVLNQIGRLRNTKGNELEDREILARSLHTNGISETVLLQIWNATEENLDKLVSALNVYKKGKTSITWHELMTVKENNEV
SIPFSVAVQNIYGAFKNTDEELAEFARNAIESGWVDAEPRENKPPGGFCAPFFSEKESRISMRYDGSIDSVRILAHELGH
AWHFYNMSFEQSSSFLDDYLPMSTAESASIFFETLLINYLIQTTDSIDIKKALLSWKIRNCFNYVMAIRASFEFEKNFYE
KCKESPLSADEIEKLSISAQEKAYGNALSKYQPFVWMKYVQFYIADVPFYNYPYTFGYLVSFSLLEIAKENKSTFHSKYK
EFLRETGKAPVEELIKKHFEIDIISSAFWDKAFKQISKDIDAYLRLI

Specific function: Unknown

COG id: COG1164

COG function: function code E; Oligoendopeptidase F

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M3B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001567
- InterPro:   IPR004438
- InterPro:   IPR013647 [H]

Pfam domain/function: PF01432 Peptidase_M3; PF08439 Peptidase_M3_N [H]

EC number: NA

Molecular weight: Translated: 61340; Mature: 61340

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHEIARWDLDRLYTYGDIILPILELKGQYMVTKDVENLSKLIQAIEKAEYYLYCRSAEES
CCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHCCCEEEECCHHHH
VSSDITRLTMKVKELKSEVQQVIQQSEVEITDNTRLIKDELHAWENMYIQLRDRIEIEHN
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHEEEEEEEEEEEC
NKQLSFGQANHVAMNSDDEKERLEVFESLICALHKEKEIFATVLNQIGRLRNTKGNELED
CCEEECCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
REILARSLHTNGISETVLLQIWNATEENLDKLVSALNVYKKGKTSITWHELMTVKENNEV
HHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEHHHHEEEECCCCE
SIPFSVAVQNIYGAFKNTDEELAEFARNAIESGWVDAEPRENKPPGGFCAPFFSEKESRI
ECHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
SMRYDGSIDSVRILAHELGHAWHFYNMSFEQSSSFLDDYLPMSTAESASIFFETLLINYL
EEEECCCCHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
IQTTDSIDIKKALLSWKIRNCFNYVMAIRASFEFEKNFYEKCKESPLSADEIEKLSISAQ
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHH
EKAYGNALSKYQPFVWMKYVQFYIADVPFYNYPYTFGYLVSFSLLEIAKENKSTFHSKYK
HHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EFLRETGKAPVEELIKKHFEIDIISSAFWDKAFKQISKDIDAYLRLI
HHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MHEIARWDLDRLYTYGDIILPILELKGQYMVTKDVENLSKLIQAIEKAEYYLYCRSAEES
CCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHCCCEEEECCHHHH
VSSDITRLTMKVKELKSEVQQVIQQSEVEITDNTRLIKDELHAWENMYIQLRDRIEIEHN
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHEEEEEEEEEEEC
NKQLSFGQANHVAMNSDDEKERLEVFESLICALHKEKEIFATVLNQIGRLRNTKGNELED
CCEEECCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
REILARSLHTNGISETVLLQIWNATEENLDKLVSALNVYKKGKTSITWHELMTVKENNEV
HHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEHHHHEEEECCCCE
SIPFSVAVQNIYGAFKNTDEELAEFARNAIESGWVDAEPRENKPPGGFCAPFFSEKESRI
ECHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
SMRYDGSIDSVRILAHELGHAWHFYNMSFEQSSSFLDDYLPMSTAESASIFFETLLINYL
EEEECCCCHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
IQTTDSIDIKKALLSWKIRNCFNYVMAIRASFEFEKNFYEKCKESPLSADEIEKLSISAQ
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHH
EKAYGNALSKYQPFVWMKYVQFYIADVPFYNYPYTFGYLVSFSLLEIAKENKSTFHSKYK
HHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EFLRETGKAPVEELIKKHFEIDIISSAFWDKAFKQISKDIDAYLRLI
HHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11353084 [H]