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The map label for this gene is oppA [H]

Identifier: 52142630

GI number: 52142630

Start: 2728776

End: 2730512

Strand: Reverse

Name: oppA [H]

Synonym: BCZK2612

Alternate gene names: 52142630

Gene position: 2730512-2728776 (Counterclockwise)

Preceding gene: 52142627

Following gene: 52142629

Centisome position: 51.51

GC content: 33.05

Gene sequence:

>1737_bases
ATGTTTATTTTAGATCAATATATTGAACTATGGTGTGCCTATGGTAAAGGGAGACAAGAAGGCGAACAATTTGAAGTAAC
AGTACAAATGATTGCAGAAACATTATTTTGTACAGAACGTAATAGTAAATTAATTATCAAAAAGTTAGATGAATTAAATT
GGATTGCTTGGTTTCCAGGGCGCGGAAGAGGGAATCGTTCTAAACTAATATTTCAAAAGCAACCAATGACATTAATTTTA
GACAGAGGAAAAGAACTAACGAAAAAAGGGGATGTAAAAAGTGGAATTTCATTTGTGAAACGCTACAGCTCACAATTTCC
GTCAGTAAAGAAAGAGTATGAAGTTTGGATAGATTCAATATTTGGTCATAAAATAGAAAGGACATCCGAAGGGAGAAGAG
ATGTACTTCGTTTGCAGGTTCAAATGAATTTAGATATTGCATTAGATCCGGTCTACGCTACAATGCGATCGGAATGTCAT
ATGGTTAAACATATTTTTGATACACTCGTATATGTAAATGAGGAATCAAACTATATAGAACCAAGGCTAGCTTTTCAATG
GGAATATAATGATGCAGAAAAGATATGGACGTTTTATTTACGAAAAGGAGTTCACTTTCATAATAGGAAACAACTTACTG
CACATGATGTTATACATTCATTGAATCGATTTATGAAAGCTGAAAATAACCCACATACGTGGATGTTACAACATATTGAA
AGCTTCCGCGCAGTAGATGAATATGTTATTGAAATTCAGTTACGTACGGAAAATAGGATATTTTTACATATGATAAGTGC
AGAACAGTGTTCTATCGTAAAGGAAGATGAAGCAGGAAACCTCATTGGAACTGGCCCCTTTAAATTAAGCGAAAAGAATG
CACATTTATTTGTATTGGAAGCACATGATTTATATTATCGTGAAAGATCTTTTCTTGACCGAATTGAACTATTGAATGTA
GAACAAAGTGTAAATACATACGATATTTTAGTAAAGGCTCAGTATAAAGATAAAGAAAAACATAATAAAGAACTATCTCG
GCTTGAGTCGAACGTGACATATATAACATGCAATCTTGCAAAAGAAGGACCAATGCAAGATTATATGTTCCGAAAAGCGT
TATATAAAATCATTCATGGCCATGCAATCGTTCAAGAACTCGGCGGAGAACGTGGAGAAGTGGCAAAGGAAATACTATTA
GCTAGTGACAGTATAGTAGAGATTGAGGAAGATATAGAAAGTTTAATTAAAGAAAGTATGTATCAAAATGAAGTGCTACA
AATTTACACATTTACAGGGCAAGATCATGTAGAAGATGCGCAATGGATACAAAAGGAGTGTGCGAAGTACGGTATTCGTG
TAGAAAATAATTTTCTTGAAATAGAAGAGTTATTGGAAATAAATACGATACAAAAGGCTGATATGATGCATGATAGTGCA
ACGATTAGCGAACGAATAGAAGATAGTCTACTATACATGTTTCTTACAAAAAATAGTTTTATTCATGGGCAAAGCAGCAT
GGACTTTCATGCAATGTTATCACCTTATTTCAAACAAGAACAAGTAGAGAATAGAGTTACACTGTTACGCGATATTGAGT
ACACATTGTTACGTCAAATTCATGTTATTCCTTTATATCGCAACAAACAACAAGTAACTTCTCATGAAAAAGTACAAAAT
ATAATGATTAATTCACAAGGGTGGATTGATTTTTATAAAATATGGTTTAAACCTTGA

Upstream 100 bases:

>100_bases
ATTGTTTCCTCCTTTCTATATTGAAATGATAAGATGAAAGGAGGAATGGAAAAAGGGTAGAAACAAAAGGGGATATTTTT
CACCTTTTAGGGGGATTATG

Downstream 100 bases:

>100_bases
TAAATAAAGGTTCTTACGCATTCTTTACAAGAGGTGTAAGAACCTTTTTTTGTATGTAAAACAGGTTTGTTTTACACATT
GTTACGCTACTTGTGATAAA

Product: oligopeptide ABC transporter, substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 578; Mature: 578

Protein sequence:

>578_residues
MFILDQYIELWCAYGKGRQEGEQFEVTVQMIAETLFCTERNSKLIIKKLDELNWIAWFPGRGRGNRSKLIFQKQPMTLIL
DRGKELTKKGDVKSGISFVKRYSSQFPSVKKEYEVWIDSIFGHKIERTSEGRRDVLRLQVQMNLDIALDPVYATMRSECH
MVKHIFDTLVYVNEESNYIEPRLAFQWEYNDAEKIWTFYLRKGVHFHNRKQLTAHDVIHSLNRFMKAENNPHTWMLQHIE
SFRAVDEYVIEIQLRTENRIFLHMISAEQCSIVKEDEAGNLIGTGPFKLSEKNAHLFVLEAHDLYYRERSFLDRIELLNV
EQSVNTYDILVKAQYKDKEKHNKELSRLESNVTYITCNLAKEGPMQDYMFRKALYKIIHGHAIVQELGGERGEVAKEILL
ASDSIVEIEEDIESLIKESMYQNEVLQIYTFTGQDHVEDAQWIQKECAKYGIRVENNFLEIEELLEINTIQKADMMHDSA
TISERIEDSLLYMFLTKNSFIHGQSSMDFHAMLSPYFKQEQVENRVTLLRDIEYTLLRQIHVIPLYRNKQQVTSHEKVQN
IMINSQGWIDFYKIWFKP

Sequences:

>Translated_578_residues
MFILDQYIELWCAYGKGRQEGEQFEVTVQMIAETLFCTERNSKLIIKKLDELNWIAWFPGRGRGNRSKLIFQKQPMTLIL
DRGKELTKKGDVKSGISFVKRYSSQFPSVKKEYEVWIDSIFGHKIERTSEGRRDVLRLQVQMNLDIALDPVYATMRSECH
MVKHIFDTLVYVNEESNYIEPRLAFQWEYNDAEKIWTFYLRKGVHFHNRKQLTAHDVIHSLNRFMKAENNPHTWMLQHIE
SFRAVDEYVIEIQLRTENRIFLHMISAEQCSIVKEDEAGNLIGTGPFKLSEKNAHLFVLEAHDLYYRERSFLDRIELLNV
EQSVNTYDILVKAQYKDKEKHNKELSRLESNVTYITCNLAKEGPMQDYMFRKALYKIIHGHAIVQELGGERGEVAKEILL
ASDSIVEIEEDIESLIKESMYQNEVLQIYTFTGQDHVEDAQWIQKECAKYGIRVENNFLEIEELLEINTIQKADMMHDSA
TISERIEDSLLYMFLTKNSFIHGQSSMDFHAMLSPYFKQEQVENRVTLLRDIEYTLLRQIHVIPLYRNKQQVTSHEKVQN
IMINSQGWIDFYKIWFKP
>Mature_578_residues
MFILDQYIELWCAYGKGRQEGEQFEVTVQMIAETLFCTERNSKLIIKKLDELNWIAWFPGRGRGNRSKLIFQKQPMTLIL
DRGKELTKKGDVKSGISFVKRYSSQFPSVKKEYEVWIDSIFGHKIERTSEGRRDVLRLQVQMNLDIALDPVYATMRSECH
MVKHIFDTLVYVNEESNYIEPRLAFQWEYNDAEKIWTFYLRKGVHFHNRKQLTAHDVIHSLNRFMKAENNPHTWMLQHIE
SFRAVDEYVIEIQLRTENRIFLHMISAEQCSIVKEDEAGNLIGTGPFKLSEKNAHLFVLEAHDLYYRERSFLDRIELLNV
EQSVNTYDILVKAQYKDKEKHNKELSRLESNVTYITCNLAKEGPMQDYMFRKALYKIIHGHAIVQELGGERGEVAKEILL
ASDSIVEIEEDIESLIKESMYQNEVLQIYTFTGQDHVEDAQWIQKECAKYGIRVENNFLEIEELLEINTIQKADMMHDSA
TISERIEDSLLYMFLTKNSFIHGQSSMDFHAMLSPYFKQEQVENRVTLLRDIEYTLLRQIHVIPLYRNKQQVTSHEKVQN
IMINSQGWIDFYKIWFKP

Specific function: Unknown

COG id: COG4533

COG function: function code R; ABC-type uncharacterized transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786650, Length=600, Percent_Identity=20.8333333333333, Blast_Score=117, Evalue=3e-27,
Organism=Escherichia coli, GI1786256, Length=359, Percent_Identity=24.2339832869081, Blast_Score=110, Evalue=2e-25,
Organism=Escherichia coli, GI1787551, Length=485, Percent_Identity=21.2371134020619, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI87081878, Length=285, Percent_Identity=25.9649122807018, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1789966, Length=309, Percent_Identity=24.9190938511327, Blast_Score=69, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 68339; Mature: 68339

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFILDQYIELWCAYGKGRQEGEQFEVTVQMIAETLFCTERNSKLIIKKLDELNWIAWFPG
CCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEHEEHHCCCCEEEECCC
RGRGNRSKLIFQKQPMTLILDRGKELTKKGDVKSGISFVKRYSSQFPSVKKEYEVWIDSI
CCCCCCCCEEEECCCCEEEECCCCHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
FGHKIERTSEGRRDVLRLQVQMNLDIALDPVYATMRSECHMVKHIFDTLVYVNEESNYIE
HCCHHHHCCCCCCEEEEEEEEECCEEEECHHHHHHHHHHHHHHHHHHHHEEECCCCCCCC
PRLAFQWEYNDAEKIWTFYLRKGVHFHNRKQLTAHDVIHSLNRFMKAENNPHTWMLQHIE
CEEEEEEECCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHH
SFRAVDEYVIEIQLRTENRIFLHMISAEQCSIVKEDEAGNLIGTGPFKLSEKNAHLFVLE
HHHHHHEEEEEEEEECCCEEEEEEECCCCCCEEEECCCCCEEECCCCEECCCCCEEEEEE
AHDLYYRERSFLDRIELLNVEQSVNTYDILVKAQYKDKEKHNKELSRLESNVTYITCNLA
CCHHHHHHHHHHHHHHHHCHHHCCCEEEEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC
KEGPMQDYMFRKALYKIIHGHAIVQELGGERGEVAKEILLASDSIVEIEEDIESLIKESM
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
YQNEVLQIYTFTGQDHVEDAQWIQKECAKYGIRVENNFLEIEELLEINTIQKADMMHDSA
HCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHCHH
TISERIEDSLLYMFLTKNSFIHGQSSMDFHAMLSPYFKQEQVENRVTLLRDIEYTLLRQI
HHHHHHHHHEEEEEEECCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
HVIPLYRNKQQVTSHEKVQNIMINSQGWIDFYKIWFKP
EEEEEECCHHHHHHHHHHHHHEECCCCCEEEEEEEECC
>Mature Secondary Structure
MFILDQYIELWCAYGKGRQEGEQFEVTVQMIAETLFCTERNSKLIIKKLDELNWIAWFPG
CCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEHEEHHCCCCEEEECCC
RGRGNRSKLIFQKQPMTLILDRGKELTKKGDVKSGISFVKRYSSQFPSVKKEYEVWIDSI
CCCCCCCCEEEECCCCEEEECCCCHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
FGHKIERTSEGRRDVLRLQVQMNLDIALDPVYATMRSECHMVKHIFDTLVYVNEESNYIE
HCCHHHHCCCCCCEEEEEEEEECCEEEECHHHHHHHHHHHHHHHHHHHHEEECCCCCCCC
PRLAFQWEYNDAEKIWTFYLRKGVHFHNRKQLTAHDVIHSLNRFMKAENNPHTWMLQHIE
CEEEEEEECCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHH
SFRAVDEYVIEIQLRTENRIFLHMISAEQCSIVKEDEAGNLIGTGPFKLSEKNAHLFVLE
HHHHHHEEEEEEEEECCCEEEEEEECCCCCCEEEECCCCCEEECCCCEECCCCCEEEEEE
AHDLYYRERSFLDRIELLNVEQSVNTYDILVKAQYKDKEKHNKELSRLESNVTYITCNLA
CCHHHHHHHHHHHHHHHHCHHHCCCEEEEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC
KEGPMQDYMFRKALYKIIHGHAIVQELGGERGEVAKEILLASDSIVEIEEDIESLIKESM
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
YQNEVLQIYTFTGQDHVEDAQWIQKECAKYGIRVENNFLEIEELLEINTIQKADMMHDSA
HCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHCHH
TISERIEDSLLYMFLTKNSFIHGQSSMDFHAMLSPYFKQEQVENRVTLLRDIEYTLLRQI
HHHHHHHHHEEEEEEECCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
HVIPLYRNKQQVTSHEKVQNIMINSQGWIDFYKIWFKP
EEEEEECCHHHHHHHHHHHHHEECCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]