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The map label for this gene is yddQ [H]

Identifier: 52142563

GI number: 52142563

Start: 2797486

End: 2798016

Strand: Reverse

Name: yddQ [H]

Synonym: BCZK2680

Alternate gene names: 52142563

Gene position: 2798016-2797486 (Counterclockwise)

Preceding gene: 52142558

Following gene: 52142564

Centisome position: 52.78

GC content: 39.74

Gene sequence:

>531_bases
ATGAAAAAAGCATTATTAGTAATTGATGTGCAAGCAGGTATGTATACAGCAGGAATGCCAGTACATAATGGGGAAAAGTT
TTTAGAGACATTACAAGAGCTTATTGGGGAATGCCGTTCAAATGATATTCCGGTAATTTATGTGCAACATAACGGACCGA
AAGACCATCCGTTAGAAAAAGGTACAGACGGGTGGAAGATCCATGCAGCAATTACCCCACTAGAAGGAGACAGTATCGTT
GAAAAAACGACGCCAGATTCATTCTATAAGACAAACTTAAACGAAGTGTTACAAGACAAGGGAATCAATCATGTTATCAT
TTCAGGAATGCAGACGCAGTACTGTGTGGATACGACAACGCGCAGAGCGTGTAGTGAAGGGTACAAAGTAACGTTAGTGA
GTGATGCACATAGTACGTTTGATACAGAAGTCTTACGTGCTGAGGACATTGTGAAGCATCATAACGTAGTGTTTGGAGCG
TTTGCTAATGTTGTTACGTTAAAAGATTTGAAAGGAACTGTCTCTAAATAA

Upstream 100 bases:

>100_bases
GGATTTAAAAAGGTGAAGATTTTAAAGGAACATGAACTGCATGAAGGGGTATTAGAAGATTGTTGGATGATGGAATATAA
ATAAAAGGGGGCTGCGCGAT

Downstream 100 bases:

>100_bases
GAGGCAGTTTTTTATTTAGAAGAAATGGCGTCAAATAATGTCGGTAAGTCGATACATTGAAAAATCGTCAATATAATTTC
ACGTACCATAATAAAAACAC

Product: isochorismatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MKKALLVIDVQAGMYTAGMPVHNGEKFLETLQELIGECRSNDIPVIYVQHNGPKDHPLEKGTDGWKIHAAITPLEGDSIV
EKTTPDSFYKTNLNEVLQDKGINHVIISGMQTQYCVDTTTRRACSEGYKVTLVSDAHSTFDTEVLRAEDIVKHHNVVFGA
FANVVTLKDLKGTVSK

Sequences:

>Translated_176_residues
MKKALLVIDVQAGMYTAGMPVHNGEKFLETLQELIGECRSNDIPVIYVQHNGPKDHPLEKGTDGWKIHAAITPLEGDSIV
EKTTPDSFYKTNLNEVLQDKGINHVIISGMQTQYCVDTTTRRACSEGYKVTLVSDAHSTFDTEVLRAEDIVKHHNVVFGA
FANVVTLKDLKGTVSK
>Mature_176_residues
MKKALLVIDVQAGMYTAGMPVHNGEKFLETLQELIGECRSNDIPVIYVQHNGPKDHPLEKGTDGWKIHAAITPLEGDSIV
EKTTPDSFYKTNLNEVLQDKGINHVIISGMQTQYCVDTTTRRACSEGYKVTLVSDAHSTFDTEVLRAEDIVKHHNVVFGA
FANVVTLKDLKGTVSK

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the isochorismatase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 19439; Mature: 19439

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKALLVIDVQAGMYTAGMPVHNGEKFLETLQELIGECRSNDIPVIYVQHNGPKDHPLEK
CCCEEEEEEECCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCC
GTDGWKIHAAITPLEGDSIVEKTTPDSFYKTNLNEVLQDKGINHVIISGMQTQYCVDTTT
CCCCEEEEEEEECCCCCCEECCCCCCHHHHCCHHHHHHHCCCCEEEEECCCCEEEECHHH
RRACSEGYKVTLVSDAHSTFDTEVLRAEDIVKHHNVVFGAFANVVTLKDLKGTVSK
HHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEHHHHEEEEECCCCCCCC
>Mature Secondary Structure
MKKALLVIDVQAGMYTAGMPVHNGEKFLETLQELIGECRSNDIPVIYVQHNGPKDHPLEK
CCCEEEEEEECCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCC
GTDGWKIHAAITPLEGDSIVEKTTPDSFYKTNLNEVLQDKGINHVIISGMQTQYCVDTTT
CCCCEEEEEEEECCCCCCEECCCCCCHHHHCCHHHHHHHCCCCEEEEECCCCEEEECHHH
RRACSEGYKVTLVSDAHSTFDTEVLRAEDIVKHHNVVFGAFANVVTLKDLKGTVSK
HHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEHHHHEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]