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The map label for this gene is ldcA [C]

Identifier: 52142278

GI number: 52142278

Start: 3096768

End: 3097799

Strand: Direct

Name: ldcA [C]

Synonym: BCZK2964

Alternate gene names: 52142278

Gene position: 3096768-3097799 (Clockwise)

Preceding gene: 52142279

Following gene: 52142277

Centisome position: 58.42

GC content: 37.11

Gene sequence:

>1032_bases
ATGTTAATAAAACCAAAGAGGTTACAAGCAGGTGATATCGTGGCAACAGTAAGTCCTTCATGGGGAGGCGCAGGTGATTC
TGACATAAGATGGCGTTATGAGCAAGGCGTAAAAAGATTAGAAGAAGTTTTCGGTCTTACCGTTATCCCAATGCCAAATA
GTTTAAAAGGTAGCGAATTCATTTATAACAACCCACAGGCTCGTGCGGAAGATTTAATGAAAGCATTTAAAGATACGCGC
GTGAAAGCAATTATTGCTAATATTGGCGGTGAAGATAGCATTCGCTTACTTCCCTATATAGATTTTAATGTAATACGTGA
AAATCCGAAAATTTTTATGGGATACTCTGACGTTACCGTCTCACATTTATTTTGCCATAAAGCAGGTCTTTCCTCTTTTT
ACGGTCCAGCAATTTTGACCGACTTTGCTGAAAATGTAGAGATGGATTCATATACGGTTGAAATGGTAAATCGAACTCTC
TTTTCAAATGAAATGATTGGCGAAATTCAAGCAGCTCCTGAATGGACGAGTGAGCGTTTAGAATGGATAGAAGTAAATAA
GGATACAAGACGTACGATGCAGCAAAACAACGGATATGAGTTACTTCAAGGCTCTACTACTGTACAAGGACGTTTAATTG
GTGGTTGCATTGAAGTACTAGAATTTGCAAAAGGAACGGAGCTTTGGCCTGAGAAAAAACATTGGGAGGATAGTATTCTC
TTCTTTGAAACTTCTGAAGATCATCCAGAACCAAGTTATATAAAGTATTGGTTACGAAATTATGCAGCGCAAGGCATTCT
GCAAAAAACAAAAGGTATCATTTTCGGTAAACCGAAAGATGAACAATACTATGAAGAATATAAACATGAAATACTGAATG
TTATGAGAGAATATAACTTAGAAGATTTGCCGATTCTTTATAATTTAAATTTTGGCCATACTGAACCGAAGTTTATTTTA
CCTTACGGCGCAATGGCAGAAATTGATTGTGGAAATGGATCGTTCTCTATTTTAGAAAGTGGCGTGGAATGA

Upstream 100 bases:

>100_bases
ACGGTTTGATGATGAAGAAACTAATGTCATGCATCATATTTTTTCAATGCTACAGTTTGTATAATCGTAGTCTATTACAT
TATGTAGGAGCGGGGTTAAC

Downstream 100 bases:

>100_bases
ATAAAATCACTCCTATGAGATATGAATGTGAATGGATACTTTTTAAAAGTATATAATTGGAGGGAGATTACATGTATGGA
AGTAACATTTACAGTAAGTA

Product: microcin C7 self-immunity protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MLIKPKRLQAGDIVATVSPSWGGAGDSDIRWRYEQGVKRLEEVFGLTVIPMPNSLKGSEFIYNNPQARAEDLMKAFKDTR
VKAIIANIGGEDSIRLLPYIDFNVIRENPKIFMGYSDVTVSHLFCHKAGLSSFYGPAILTDFAENVEMDSYTVEMVNRTL
FSNEMIGEIQAAPEWTSERLEWIEVNKDTRRTMQQNNGYELLQGSTTVQGRLIGGCIEVLEFAKGTELWPEKKHWEDSIL
FFETSEDHPEPSYIKYWLRNYAAQGILQKTKGIIFGKPKDEQYYEEYKHEILNVMREYNLEDLPILYNLNFGHTEPKFIL
PYGAMAEIDCGNGSFSILESGVE

Sequences:

>Translated_343_residues
MLIKPKRLQAGDIVATVSPSWGGAGDSDIRWRYEQGVKRLEEVFGLTVIPMPNSLKGSEFIYNNPQARAEDLMKAFKDTR
VKAIIANIGGEDSIRLLPYIDFNVIRENPKIFMGYSDVTVSHLFCHKAGLSSFYGPAILTDFAENVEMDSYTVEMVNRTL
FSNEMIGEIQAAPEWTSERLEWIEVNKDTRRTMQQNNGYELLQGSTTVQGRLIGGCIEVLEFAKGTELWPEKKHWEDSIL
FFETSEDHPEPSYIKYWLRNYAAQGILQKTKGIIFGKPKDEQYYEEYKHEILNVMREYNLEDLPILYNLNFGHTEPKFIL
PYGAMAEIDCGNGSFSILESGVE
>Mature_343_residues
MLIKPKRLQAGDIVATVSPSWGGAGDSDIRWRYEQGVKRLEEVFGLTVIPMPNSLKGSEFIYNNPQARAEDLMKAFKDTR
VKAIIANIGGEDSIRLLPYIDFNVIRENPKIFMGYSDVTVSHLFCHKAGLSSFYGPAILTDFAENVEMDSYTVEMVNRTL
FSNEMIGEIQAAPEWTSERLEWIEVNKDTRRTMQQNNGYELLQGSTTVQGRLIGGCIEVLEFAKGTELWPEKKHWEDSIL
FFETSEDHPEPSYIKYWLRNYAAQGILQKTKGIIFGKPKDEQYYEEYKHEILNVMREYNLEDLPILYNLNFGHTEPKFIL
PYGAMAEIDCGNGSFSILESGVE

Specific function: L,D-carboxypeptidase [C]

COG id: COG1619

COG function: function code V; Uncharacterized proteins, homologs of microcin C7 resistance protein MccF

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S66 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003507 [H]

Pfam domain/function: PF02016 Peptidase_S66 [H]

EC number: NA

Molecular weight: Translated: 39217; Mature: 39217

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIKPKRLQAGDIVATVSPSWGGAGDSDIRWRYEQGVKRLEEVFGLTVIPMPNSLKGSEF
CCCCCCCCCCCCEEEEECCCCCCCCCCCCEEHHHHHHHHHHHHHCEEEECCCCCCCCCCE
IYNNPQARAEDLMKAFKDTRVKAIIANIGGEDSIRLLPYIDFNVIRENPKIFMGYSDVTV
EECCCHHHHHHHHHHHHHHHEEEEEEECCCCCCEEEEEEECEEEEECCCCEEEECCHHHH
SHLFCHKAGLSSFYGPAILTDFAENVEMDSYTVEMVNRTLFSNEMIGEIQAAPEWTSERL
HHHHHHHHCCHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHCCCCCHHHHCC
EWIEVNKDTRRTMQQNNGYELLQGSTTVQGRLIGGCIEVLEFAKGTELWPEKKHWEDSIL
EEEECCCHHHHHHHCCCCEEEEECCCEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEE
FFETSEDHPEPSYIKYWLRNYAAQGILQKTKGIIFGKPKDEQYYEEYKHEILNVMREYNL
EEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHCCC
EDLPILYNLNFGHTEPKFILPYGAMAEIDCGNGSFSILESGVE
CCCCEEEECCCCCCCCCEEECCCCEEEEECCCCCHHHHHCCCC
>Mature Secondary Structure
MLIKPKRLQAGDIVATVSPSWGGAGDSDIRWRYEQGVKRLEEVFGLTVIPMPNSLKGSEF
CCCCCCCCCCCCEEEEECCCCCCCCCCCCEEHHHHHHHHHHHHHCEEEECCCCCCCCCCE
IYNNPQARAEDLMKAFKDTRVKAIIANIGGEDSIRLLPYIDFNVIRENPKIFMGYSDVTV
EECCCHHHHHHHHHHHHHHHEEEEEEECCCCCCEEEEEEECEEEEECCCCEEEECCHHHH
SHLFCHKAGLSSFYGPAILTDFAENVEMDSYTVEMVNRTLFSNEMIGEIQAAPEWTSERL
HHHHHHHHCCHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHCCCCCHHHHCC
EWIEVNKDTRRTMQQNNGYELLQGSTTVQGRLIGGCIEVLEFAKGTELWPEKKHWEDSIL
EEEECCCHHHHHHHCCCCEEEEECCCEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEE
FFETSEDHPEPSYIKYWLRNYAAQGILQKTKGIIFGKPKDEQYYEEYKHEILNVMREYNL
EEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHCCC
EDLPILYNLNFGHTEPKFILPYGAMAEIDCGNGSFSILESGVE
CCCCEEEECCCCCCCCCEEECCCCEEEEECCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]