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The map label for this gene is atoE [H]

Identifier: 52142242

GI number: 52142242

Start: 3131171

End: 3132517

Strand: Direct

Name: atoE [H]

Synonym: BCZK3000

Alternate gene names: 52142242

Gene position: 3131171-3132517 (Clockwise)

Preceding gene: 52142244

Following gene: 52142238

Centisome position: 59.07

GC content: 39.57

Gene sequence:

>1347_bases
TTGTTTCGTTCTTTTACTAATGGTTGCGTCGCCTTAGTGCAACGCTTCTTGCCAGAACCGTTTATTTTATCATGTTTATT
AACTGTTTTTGTTATTTTCTTTGGCATGTTTGCAACGCATCAAACACCTGTGGAAATGATTAATCACTGGGGGAATGGCA
TTTGGGGACTTCTCGCCTTTTCTATGCAAATGGCACTTGTACTCGTAACAGGATCTGCTTTAGCAAACGCTCCTCTTATT
AAAAAAGGATTAACGAAAGCGGCAAGACTACCAAAAACAAATGGACAAGGTATTATTGCTATTTCAATCGTAAGTTTACT
AGGGGCATACATAAACTGGGGATTTGGTATTGTTGTATCTGTTTTATACGCAAAAGAAGTGGCAAGACAATTAGAAGGAT
TGGATTATAGACTAGCAATCGCTTCTTCTTACTCTGGATTTCTCATTTGGCATGCTGGGCTTTCTGCTTCTATCCCTCTT
ACGTTAGCGACAGGCGGAGAAACGTTAATGAAAACGACAGCTGGTAGTATTAAAGAAGCGATTCCAATCACTGAAACGTT
ATTCTCACCATACGCTCTCGTTCCAGTTATTATCTTTTTAGTTACGATGCCTCTCATTAATAAGGCGATGCATCCAGATG
AAAAACATACGATTACAGTAGACCCTAGCGTGTTCCATGAAGAAGCTGCAGCTCAAGAGGTAGGGAAAAATACGTTCGCT
GAGAAAATGGAAAATAGTATCATCATTACACTTTGCGTTGGATTGTTAGGTCTCATTTATATTTTCAATTACTTTTATAC
GAAAGGCTTTAACCTTACACTTGATATCGTTATTTTCATGCTATTAATTGCTGGACTTATTTTCCACCGTACTCCGATTC
AATATATTCGCGCTTTCTCAGACTCTACGAAAAGTGCTTCTGGCATTCTACTTCAATTTCCGTTTTATGCAGGAATTATG
GGGATGATGATCGGAGCAAATAGTGAAGGACTTTCACTTGGAGGAGCTATTTCGAATTTCTTTATTAGCATTTCAAACGA
AACAACTTTCCCGCTCTTTACTTTTTTAAGTGCTGGCATCGTTAATATTTTCGTTCCATCTGGTGGCGGTCAATGGGCTG
TGCAAGCACCCATTATGATTCCAGCTGGCGCTGAACTTGGTGTACCTGCTGCAAAAACAGCAATGGCCATTGCGTGGGGG
GATGCTTGGACGAATTTGATTCAACCTTTCTGGGCATTACCGGCATTAGCGATAGCCGGTTTAGGCGCTCGTGATATTAT
GGGATTTTGCGTTGTGAACTTACTATATGCAGGATTTATCATAAGTCTATGTTTCTTATTTATTTAA

Upstream 100 bases:

>100_bases
CAATCCCTCTAAAAATATCAGAATTTTCTATTTCAAAAAGGTTATGAACGAAACAACCTCGAATAATTGTAATACATATA
CATAAGGAGGTTGATCTATT

Downstream 100 bases:

>100_bases
GCGAAAAGCTAGTTTTATACTAGCTTTTTTATATAATAAATCACTTATTTCCCACGCAATTTATCACGGTCTTCCACTCT
ATCTCCGTAAGATATAATGC

Product: short-chain fatty acids transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 448; Mature: 448

Protein sequence:

>448_residues
MFRSFTNGCVALVQRFLPEPFILSCLLTVFVIFFGMFATHQTPVEMINHWGNGIWGLLAFSMQMALVLVTGSALANAPLI
KKGLTKAARLPKTNGQGIIAISIVSLLGAYINWGFGIVVSVLYAKEVARQLEGLDYRLAIASSYSGFLIWHAGLSASIPL
TLATGGETLMKTTAGSIKEAIPITETLFSPYALVPVIIFLVTMPLINKAMHPDEKHTITVDPSVFHEEAAAQEVGKNTFA
EKMENSIIITLCVGLLGLIYIFNYFYTKGFNLTLDIVIFMLLIAGLIFHRTPIQYIRAFSDSTKSASGILLQFPFYAGIM
GMMIGANSEGLSLGGAISNFFISISNETTFPLFTFLSAGIVNIFVPSGGGQWAVQAPIMIPAGAELGVPAAKTAMAIAWG
DAWTNLIQPFWALPALAIAGLGARDIMGFCVVNLLYAGFIISLCFLFI

Sequences:

>Translated_448_residues
MFRSFTNGCVALVQRFLPEPFILSCLLTVFVIFFGMFATHQTPVEMINHWGNGIWGLLAFSMQMALVLVTGSALANAPLI
KKGLTKAARLPKTNGQGIIAISIVSLLGAYINWGFGIVVSVLYAKEVARQLEGLDYRLAIASSYSGFLIWHAGLSASIPL
TLATGGETLMKTTAGSIKEAIPITETLFSPYALVPVIIFLVTMPLINKAMHPDEKHTITVDPSVFHEEAAAQEVGKNTFA
EKMENSIIITLCVGLLGLIYIFNYFYTKGFNLTLDIVIFMLLIAGLIFHRTPIQYIRAFSDSTKSASGILLQFPFYAGIM
GMMIGANSEGLSLGGAISNFFISISNETTFPLFTFLSAGIVNIFVPSGGGQWAVQAPIMIPAGAELGVPAAKTAMAIAWG
DAWTNLIQPFWALPALAIAGLGARDIMGFCVVNLLYAGFIISLCFLFI
>Mature_448_residues
MFRSFTNGCVALVQRFLPEPFILSCLLTVFVIFFGMFATHQTPVEMINHWGNGIWGLLAFSMQMALVLVTGSALANAPLI
KKGLTKAARLPKTNGQGIIAISIVSLLGAYINWGFGIVVSVLYAKEVARQLEGLDYRLAIASSYSGFLIWHAGLSASIPL
TLATGGETLMKTTAGSIKEAIPITETLFSPYALVPVIIFLVTMPLINKAMHPDEKHTITVDPSVFHEEAAAQEVGKNTFA
EKMENSIIITLCVGLLGLIYIFNYFYTKGFNLTLDIVIFMLLIAGLIFHRTPIQYIRAFSDSTKSASGILLQFPFYAGIM
GMMIGANSEGLSLGGAISNFFISISNETTFPLFTFLSAGIVNIFVPSGGGQWAVQAPIMIPAGAELGVPAAKTAMAIAWG
DAWTNLIQPFWALPALAIAGLGARDIMGFCVVNLLYAGFIISLCFLFI

Specific function: Responsible for the intake of short-chain fatty acids [H]

COG id: COG2031

COG function: function code I; Short chain fatty acids transporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788553, Length=430, Percent_Identity=46.2790697674419, Blast_Score=391, Evalue=1e-110,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006161
- InterPro:   IPR006160 [H]

Pfam domain/function: PF02667 SCFA_trans [H]

EC number: NA

Molecular weight: Translated: 48284; Mature: 48284

Theoretical pI: Translated: 7.16; Mature: 7.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRSFTNGCVALVQRFLPEPFILSCLLTVFVIFFGMFATHQTPVEMINHWGNGIWGLLAF
CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHH
SMQMALVLVTGSALANAPLIKKGLTKAARLPKTNGQGIIAISIVSLLGAYINWGFGIVVS
HHHHHHHHEECHHHHCCCHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHH
VLYAKEVARQLEGLDYRLAIASSYSGFLIWHAGLSASIPLTLATGGETLMKTTAGSIKEA
HHHHHHHHHHHCCCCEEEEEECCCCCEEEEECCCCCCCCEEEECCCHHHHHHHHHHHHHH
IPITETLFSPYALVPVIIFLVTMPLINKAMHPDEKHTITVDPSVFHEEAAAQEVGKNTFA
CCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHH
EKMENSIIITLCVGLLGLIYIFNYFYTKGFNLTLDIVIFMLLIAGLIFHRTPIQYIRAFS
HHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
DSTKSASGILLQFPFYAGIMGMMIGANSEGLSLGGAISNFFISISNETTFPLFTFLSAGI
CCCCCCCCEEEECHHHHHHHHHHHCCCCCCCCCCHHHHHHEEEECCCCCHHHHHHHHCCE
VNIFVPSGGGQWAVQAPIMIPAGAELGVPAAKTAMAIAWGDAWTNLIQPFWALPALAIAG
EEEEEECCCCCEEEECCEEECCCCCCCCCCHHHHHEEEEHHHHHHHHHHHHHHHHHHHHC
LGARDIMGFCVVNLLYAGFIISLCFLFI
CCHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MFRSFTNGCVALVQRFLPEPFILSCLLTVFVIFFGMFATHQTPVEMINHWGNGIWGLLAF
CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHH
SMQMALVLVTGSALANAPLIKKGLTKAARLPKTNGQGIIAISIVSLLGAYINWGFGIVVS
HHHHHHHHEECHHHHCCCHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHH
VLYAKEVARQLEGLDYRLAIASSYSGFLIWHAGLSASIPLTLATGGETLMKTTAGSIKEA
HHHHHHHHHHHCCCCEEEEEECCCCCEEEEECCCCCCCCEEEECCCHHHHHHHHHHHHHH
IPITETLFSPYALVPVIIFLVTMPLINKAMHPDEKHTITVDPSVFHEEAAAQEVGKNTFA
CCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHH
EKMENSIIITLCVGLLGLIYIFNYFYTKGFNLTLDIVIFMLLIAGLIFHRTPIQYIRAFS
HHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
DSTKSASGILLQFPFYAGIMGMMIGANSEGLSLGGAISNFFISISNETTFPLFTFLSAGI
CCCCCCCCEEEECHHHHHHHHHHHCCCCCCCCCCHHHHHHEEEECCCCCHHHHHHHHCCE
VNIFVPSGGGQWAVQAPIMIPAGAELGVPAAKTAMAIAWGDAWTNLIQPFWALPALAIAG
EEEEEECCCCCEEEECCEEECCCCCCCCCCHHHHHEEEEHHHHHHHHHHHHHHHHHHHHC
LGARDIMGFCVVNLLYAGFIISLCFLFI
CCHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]