Click here to switch to the map view.

The map label for this gene is ycaK [C]

Identifier: 52142241

GI number: 52142241

Start: 3132908

End: 3133483

Strand: Reverse

Name: ycaK [C]

Synonym: BCZK3002

Alternate gene names: 52142241

Gene position: 3133483-3132908 (Counterclockwise)

Preceding gene: 52142236

Following gene: 52142240

Centisome position: 59.11

GC content: 37.85

Gene sequence:

>576_bases
GTGAATGTACTTATTGTATACGCTCATCCTAGTCCTTCAAGTTTTAACGCGGCAATTTTAAATCATGTGCAAAAAGGACT
ACAGGAAACAAATCATTCAGTTACCGTACTTGATTTATATAAGGAGCAATTTGATCCAGTCCTTGTATTTAATGAAGAGA
AGAAAAGACGTGACTTAGTAAATGAAGAAGAAACAGCTCGGTACAGAACATTAGTAGAAGAAGCGGATATGCTTCTATTC
ATTTATCCGATATGGTGGTGGGGGATGCCAGCTATTTTAAAAGGATTTATTGATCGTATTTTCGTTGCTGGATTTGCTTA
TAAATATGAAGGGGCCCTGCCGAAAGGGTTACTAAAAGGAAAGAAGGCGTGGGTAATTAATACGTTAGACTCACCGTTAT
GGTACGTCGCACTATTATATCGATCAGCGGATTGGATTATGATGAAGAGAGGTGTCTTACGTTTTTGCGGCATTCGCGAT
ATAAAACGATCTGTTTTTCAATCTGTGAAAACGAGTAAACGAGAGAAGCGGGAAAAGTGGTTATTACAAATAGAAGAAAA
GGCTCGTACATTATGA

Upstream 100 bases:

>100_bases
CGGTACTACATCGCTTGTTACAAAGTTCAAAAAACGTGCAAATTGTAGAGAAGATGTTAAAGAAGGGGAAACTTTAACTT
ATAAAGGGAGTTGTTTTGTA

Downstream 100 bases:

>100_bases
ATGAAATCGATCGTATTATAAACTGTTGTGGGTATGATGACGAACTTTTTCGAACGTATATTACATGTTTACTTCAATTG
AAAAAATGTAGTGAAACATT

Product: quinone family NAD(P)H dehydrogenase

Products: NAD+; NADP+; reduced acceptor

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MNVLIVYAHPSPSSFNAAILNHVQKGLQETNHSVTVLDLYKEQFDPVLVFNEEKKRRDLVNEEETARYRTLVEEADMLLF
IYPIWWWGMPAILKGFIDRIFVAGFAYKYEGALPKGLLKGKKAWVINTLDSPLWYVALLYRSADWIMMKRGVLRFCGIRD
IKRSVFQSVKTSKREKREKWLLQIEEKARTL

Sequences:

>Translated_191_residues
MNVLIVYAHPSPSSFNAAILNHVQKGLQETNHSVTVLDLYKEQFDPVLVFNEEKKRRDLVNEEETARYRTLVEEADMLLF
IYPIWWWGMPAILKGFIDRIFVAGFAYKYEGALPKGLLKGKKAWVINTLDSPLWYVALLYRSADWIMMKRGVLRFCGIRD
IKRSVFQSVKTSKREKREKWLLQIEEKARTL
>Mature_191_residues
MNVLIVYAHPSPSSFNAAILNHVQKGLQETNHSVTVLDLYKEQFDPVLVFNEEKKRRDLVNEEETARYRTLVEEADMLLF
IYPIWWWGMPAILKGFIDRIFVAGFAYKYEGALPKGLLKGKKAWVINTLDSPLWYVALLYRSADWIMMKRGVLRFCGIRD
IKRSVFQSVKTSKREKREKWLLQIEEKARTL

Specific function: Unknown

COG id: COG2249

COG function: function code R; Putative NADPH-quinone reductase (modulator of drug activity B)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NAD(P)H dehydrogenase (quinone) family [H]

Homologues:

Organism=Homo sapiens, GI156564357, Length=212, Percent_Identity=28.7735849056604, Blast_Score=92, Evalue=3e-19,
Organism=Homo sapiens, GI4505415, Length=214, Percent_Identity=28.0373831775701, Blast_Score=75, Evalue=4e-14,
Organism=Escherichia coli, GI1787129, Length=114, Percent_Identity=35.0877192982456, Blast_Score=77, Evalue=7e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003680 [H]

Pfam domain/function: PF02525 Flavodoxin_2 [H]

EC number: 1.6.99.2

Molecular weight: Translated: 22443; Mature: 22443

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVLIVYAHPSPSSFNAAILNHVQKGLQETNHSVTVLDLYKEQFDPVLVFNEEKKRRDLV
CCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEHHHHCCCEEEECCCHHHHHCC
NEEETARYRTLVEEADMLLFIYPIWWWGMPAILKGFIDRIFVAGFAYKYEGALPKGLLKG
CHHHHHHHHHHHHHCCHHEEEHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCC
KKAWVINTLDSPLWYVALLYRSADWIMMKRGVLRFCGIRDIKRSVFQSVKTSKREKREKW
CCEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
LLQIEEKARTL
HHHHHHHHCCC
>Mature Secondary Structure
MNVLIVYAHPSPSSFNAAILNHVQKGLQETNHSVTVLDLYKEQFDPVLVFNEEKKRRDLV
CCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEHHHHCCCEEEECCCHHHHHCC
NEEETARYRTLVEEADMLLFIYPIWWWGMPAILKGFIDRIFVAGFAYKYEGALPKGLLKG
CHHHHHHHHHHHHHCCHHEEEHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCC
KKAWVINTLDSPLWYVALLYRSADWIMMKRGVLRFCGIRDIKRSVFQSVKTSKREKREKW
CCEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
LLQIEEKARTL
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NADH; NADPH; H+; acceptor

Specific reaction: NAD(P)H + H+ + acceptor = NAD(P)+ + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]