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The map label for this gene is ybjJ [H]

Identifier: 52142195

GI number: 52142195

Start: 3177031

End: 3177579

Strand: Reverse

Name: ybjJ [H]

Synonym: BCZK3048

Alternate gene names: 52142195

Gene position: 3177579-3177031 (Counterclockwise)

Preceding gene: 52142192

Following gene: 52142194

Centisome position: 59.94

GC content: 40.44

Gene sequence:

>549_bases
ATGGAAAAAAAGGTGCTTTTACTTGGTCTTTTTGTGCTTGGAATGGCATTTGCAGAAGGGAGTGCGAATGATTGGCTACC
TATCGTGATGGTAGACGGACATCAGCAAAGTGTAGTGACAGGTTCTATTATGTACACTATTTTTGTATTGGCAATGACAT
TGGCTCGAATGTGCAGTAGTTATTTTCTTGATCGATTCGGTCGTGTCGCTGTCGTACGTGCTACTATTATGATGGCTAGT
ATAGGAATGACAATTGTCATATTTGGGAGTAACTCATATTTTCTAGCATTTGGTGTAGTACTATGGGGGATTGGTGCCGC
ACTAGGTTTCCCAATTGGTCTTTCTGTTGCTGGAGATGGCGGAGAAAATGCGACTTCTAATGTTGCGACAGTTTCTATAA
TCGGTTTTACAGCGTTTTTAGTCGGACCACCATTTTTAGGGATACTTGGAGAAGCATTCGGAATACGTAATGCTTTGCTA
GCAGTTTTATTATTTGTTATCTTGTCTGGAATTGTATCGTCTGTTACGAGAGAGAATACATCGAGTTAA

Upstream 100 bases:

>100_bases
TGTATTACTTGTATGTATGTTGTATCGTTTTCTTCCGCATGGAACAGGAAAGAAGGAGAAATCACGGAACAAAAAGTGAG
CGAAGCATAATCCTTTACGT

Downstream 100 bases:

>100_bases
ATACGGAATGCCGCTAGTAGAAATATATCATCTATATTGCTTTAGAAAATGATGTATGATATATTGTCAACGCAACTTAT
TAAAAGTGTTTAATAAGTAT

Product: sugar (and other) transporter, C-terminal region

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MEKKVLLLGLFVLGMAFAEGSANDWLPIVMVDGHQQSVVTGSIMYTIFVLAMTLARMCSSYFLDRFGRVAVVRATIMMAS
IGMTIVIFGSNSYFLAFGVVLWGIGAALGFPIGLSVAGDGGENATSNVATVSIIGFTAFLVGPPFLGILGEAFGIRNALL
AVLLFVILSGIVSSVTRENTSS

Sequences:

>Translated_182_residues
MEKKVLLLGLFVLGMAFAEGSANDWLPIVMVDGHQQSVVTGSIMYTIFVLAMTLARMCSSYFLDRFGRVAVVRATIMMAS
IGMTIVIFGSNSYFLAFGVVLWGIGAALGFPIGLSVAGDGGENATSNVATVSIIGFTAFLVGPPFLGILGEAFGIRNALL
AVLLFVILSGIVSSVTRENTSS
>Mature_182_residues
MEKKVLLLGLFVLGMAFAEGSANDWLPIVMVDGHQQSVVTGSIMYTIFVLAMTLARMCSSYFLDRFGRVAVVRATIMMAS
IGMTIVIFGSNSYFLAFGVVLWGIGAALGFPIGLSVAGDGGENATSNVATVSIIGFTAFLVGPPFLGILGEAFGIRNALL
AVLLFVILSGIVSSVTRENTSS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787068, Length=167, Percent_Identity=51.497005988024, Blast_Score=177, Evalue=3e-46,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 19085; Mature: 19085

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKKVLLLGLFVLGMAFAEGSANDWLPIVMVDGHQQSVVTGSIMYTIFVLAMTLARMCSS
CCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
YFLDRFGRVAVVRATIMMASIGMTIVIFGSNSYFLAFGVVLWGIGAALGFPIGLSVAGDG
HHHHHHCHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEECCC
GENATSNVATVSIIGFTAFLVGPPFLGILGEAFGIRNALLAVLLFVILSGIVSSVTRENT
CCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SS
CC
>Mature Secondary Structure
MEKKVLLLGLFVLGMAFAEGSANDWLPIVMVDGHQQSVVTGSIMYTIFVLAMTLARMCSS
CCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
YFLDRFGRVAVVRATIMMASIGMTIVIFGSNSYFLAFGVVLWGIGAALGFPIGLSVAGDG
HHHHHHCHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEECCC
GENATSNVATVSIIGFTAFLVGPPFLGILGEAFGIRNALLAVLLFVILSGIVSSVTRENT
CCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SS
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]