Click here to switch to the map view.

The map label for this gene is tsr [C]

Identifier: 52142147

GI number: 52142147

Start: 3225229

End: 3226959

Strand: Reverse

Name: tsr [C]

Synonym: BCZK3093

Alternate gene names: 52142147

Gene position: 3226959-3225229 (Counterclockwise)

Preceding gene: 52142148

Following gene: 52142151

Centisome position: 60.88

GC content: 32.87

Gene sequence:

>1731_bases
ATGGAGAATGTAAAATTGGAATTATTAAGAAACAGTAAGGTTGGTACAAAATTAAACATACTAATAGCTATATCAAGTAT
TGCATGTATAGTATTATCCCTAATAGGATTTTTGGGGTTAGAAAGAGGGAAAAGTACTTCCTCTAATATGTATGAGGATA
ATTTACTACCAATTGAGTGGATCGGAATTGTAGAATCTAATTTTTATCATGTTAATATGAACTTTATGGAAATTATGTTA
TCAAAAGATGAAAAAAGAATGAGCGAATTAATAAGAGAAATGGACGGAATTCGTAAGGAAAATGATCATCTTTTAAAGCA
GTTTGAGGCTAAAGTTATTTCTACTAAAGAAAAAGAATTATATAACACGTTTCATGAAACATTTAATGAATTAAGAACTC
AAATGAGGAAAGCGCAAGAATTAGGAAAATCTAATAATGAGGAAGCATATGCATATTACCTAAAAGAGATTGAACCTAAT
ATGCAAAAATCAATTCAATCAATTCGTGAATTGATTTTATATAATAGTAATGATGCAGAGCTTTTACAAAAGGAAAATAA
TAATGGTGCACAAAATACAATGATAATGTTTGTTAGTATTTCGATTTTAGCAATTTTAATAATTATATTCATTGGGTATA
TTATTAAATCAACTATCCGAAAACCACTTGCGTTACTACAAAAGGATATGGAAAAAGTAGCAGCAGGAGATTTAACAACT
CGTACTTCTTATAAAGCAAATAATGAATTAGGACATATTGTCCAGTCTTTTAATAGTATGTTAGATAACCTTCAACAATT
AATCGCGAATGTTAAGATAACAACACAAGAGGTTATTTCTACTACGGAGGGTGTATTACAAGATACAAAGCGAGCATCTC
ATATTTCAAATGAGGTTGTACAGACTGTTTTAGAGGTAAAAACAAAAATAGAAGGACAGGTAACTAGTATTCAGGAGAGT
TCATCATCGATGGAAGAAATTACAAGTGGCGTGCAAACTGTAGCTGAATCTTCAGCAGTAGTCGCGGAGGTAGCAGTAAC
GACTGCTGAACAAATAAATATCGGTAGTGAAGTGATAAATCACTCTATTCTTCAAATGAACAGTGTGCATGATGTTGTCG
AGGAAACATCAAAAGTAATAAATAAACTTGTTACACGTACACAACAGATTGATACAGCTCTAGCGGCAATTACTAATATT
GCTGAACAAACGAACCTTCTTGCCTTAAATGCTGCTATTGAAGCGGCACGTGCTGGAGAGAATGGAAAAGGATTTGCTGT
GGTTGCCGCAGAAGTTCGAGACTTGGCTGAGCAATCTAAAGAATCTGCAAAGGAAGTTAATCATTTAATCAAATCCATTC
AACAAGATACTCAAGATACAGTTAATGTCATGCAAAAAGGCCAACAGAAGGCAGTGGAAGGAAAAGAAGCTGCCCACAAA
GCGAATCAAACCTTCTTGTCTATTATGAGAGATATTGATAAAATTACAGGTCAAATTCAAGAAGTATCCGCAGCGACAGA
AGAGATGTCTGCTGGTACAGAAGAAGTAAATGCTTCTCTTTCGCTAGTTTCTGAAACTGCAACGGATGTAAAAAAAGAGA
CTCTTCAAACAGTAAAATCAATTCAATCCCAGGCTGTATCAATTGAACAAATATCAATTCAATCCAACAAAATGAAAGAA
AAGGTAGGAGAATTAACGGAATTGGTTTCAAAATTTAATATTACAGAATAA

Upstream 100 bases:

>100_bases
GATTTAGTAGTGGATGATATGCAAAATTGCATATCGTAAAATAAACATCGTAATTTGGGGATTCTTATTATAAAATACAT
TACTTAAACTATATATTAGA

Downstream 100 bases:

>100_bases
AAAGGATAATTCATTCAATTATAAGTGTAATAACATGTATGAAAAACACATGAAGACTTAAGGGTCTTTGTGTGTTTTTT
TATTGAATAATGTATGAAAT

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 576; Mature: 576

Protein sequence:

>576_residues
MENVKLELLRNSKVGTKLNILIAISSIACIVLSLIGFLGLERGKSTSSNMYEDNLLPIEWIGIVESNFYHVNMNFMEIML
SKDEKRMSELIREMDGIRKENDHLLKQFEAKVISTKEKELYNTFHETFNELRTQMRKAQELGKSNNEEAYAYYLKEIEPN
MQKSIQSIRELILYNSNDAELLQKENNNGAQNTMIMFVSISILAILIIIFIGYIIKSTIRKPLALLQKDMEKVAAGDLTT
RTSYKANNELGHIVQSFNSMLDNLQQLIANVKITTQEVISTTEGVLQDTKRASHISNEVVQTVLEVKTKIEGQVTSIQES
SSSMEEITSGVQTVAESSAVVAEVAVTTAEQINIGSEVINHSILQMNSVHDVVEETSKVINKLVTRTQQIDTALAAITNI
AEQTNLLALNAAIEAARAGENGKGFAVVAAEVRDLAEQSKESAKEVNHLIKSIQQDTQDTVNVMQKGQQKAVEGKEAAHK
ANQTFLSIMRDIDKITGQIQEVSAATEEMSAGTEEVNASLSLVSETATDVKKETLQTVKSIQSQAVSIEQISIQSNKMKE
KVGELTELVSKFNITE

Sequences:

>Translated_576_residues
MENVKLELLRNSKVGTKLNILIAISSIACIVLSLIGFLGLERGKSTSSNMYEDNLLPIEWIGIVESNFYHVNMNFMEIML
SKDEKRMSELIREMDGIRKENDHLLKQFEAKVISTKEKELYNTFHETFNELRTQMRKAQELGKSNNEEAYAYYLKEIEPN
MQKSIQSIRELILYNSNDAELLQKENNNGAQNTMIMFVSISILAILIIIFIGYIIKSTIRKPLALLQKDMEKVAAGDLTT
RTSYKANNELGHIVQSFNSMLDNLQQLIANVKITTQEVISTTEGVLQDTKRASHISNEVVQTVLEVKTKIEGQVTSIQES
SSSMEEITSGVQTVAESSAVVAEVAVTTAEQINIGSEVINHSILQMNSVHDVVEETSKVINKLVTRTQQIDTALAAITNI
AEQTNLLALNAAIEAARAGENGKGFAVVAAEVRDLAEQSKESAKEVNHLIKSIQQDTQDTVNVMQKGQQKAVEGKEAAHK
ANQTFLSIMRDIDKITGQIQEVSAATEEMSAGTEEVNASLSLVSETATDVKKETLQTVKSIQSQAVSIEQISIQSNKMKE
KVGELTELVSKFNITE
>Mature_576_residues
MENVKLELLRNSKVGTKLNILIAISSIACIVLSLIGFLGLERGKSTSSNMYEDNLLPIEWIGIVESNFYHVNMNFMEIML
SKDEKRMSELIREMDGIRKENDHLLKQFEAKVISTKEKELYNTFHETFNELRTQMRKAQELGKSNNEEAYAYYLKEIEPN
MQKSIQSIRELILYNSNDAELLQKENNNGAQNTMIMFVSISILAILIIIFIGYIIKSTIRKPLALLQKDMEKVAAGDLTT
RTSYKANNELGHIVQSFNSMLDNLQQLIANVKITTQEVISTTEGVLQDTKRASHISNEVVQTVLEVKTKIEGQVTSIQES
SSSMEEITSGVQTVAESSAVVAEVAVTTAEQINIGSEVINHSILQMNSVHDVVEETSKVINKLVTRTQQIDTALAAITNI
AEQTNLLALNAAIEAARAGENGKGFAVVAAEVRDLAEQSKESAKEVNHLIKSIQQDTQDTVNVMQKGQQKAVEGKEAAHK
ANQTFLSIMRDIDKITGQIQEVSAATEEMSAGTEEVNASLSLVSETATDVKKETLQTVKSIQSQAVSIEQISIQSNKMKE
KVGELTELVSKFNITE

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=337, Percent_Identity=27.5964391691395, Blast_Score=139, Evalue=7e-34,
Organism=Escherichia coli, GI1788194, Length=380, Percent_Identity=27.6315789473684, Blast_Score=135, Evalue=1e-32,
Organism=Escherichia coli, GI1787690, Length=396, Percent_Identity=25.7575757575758, Blast_Score=125, Evalue=6e-30,
Organism=Escherichia coli, GI1788195, Length=309, Percent_Identity=27.5080906148867, Blast_Score=118, Evalue=1e-27,
Organism=Escherichia coli, GI1789453, Length=363, Percent_Identity=25.068870523416, Blast_Score=100, Evalue=4e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 63894; Mature: 63894

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENVKLELLRNSKVGTKLNILIAISSIACIVLSLIGFLGLERGKSTSSNMYEDNLLPIEW
CCCCEEHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEE
IGIVESNFYHVNMNFMEIMLSKDEKRMSELIREMDGIRKENDHLLKQFEAKVISTKEKEL
EEEEECCEEEEEHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
YNTFHETFNELRTQMRKAQELGKSNNEEAYAYYLKEIEPNMQKSIQSIRELILYNSNDAE
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHH
LLQKENNNGAQNTMIMFVSISILAILIIIFIGYIIKSTIRKPLALLQKDMEKVAAGDLTT
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
RTSYKANNELGHIVQSFNSMLDNLQQLIANVKITTQEVISTTEGVLQDTKRASHISNEVV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
QTVLEVKTKIEGQVTSIQESSSSMEEITSGVQTVAESSAVVAEVAVTTAEQINIGSEVIN
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
HSILQMNSVHDVVEETSKVINKLVTRTQQIDTALAAITNIAEQTNLLALNAAIEAARAGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NGKGFAVVAAEVRDLAEQSKESAKEVNHLIKSIQQDTQDTVNVMQKGQQKAVEGKEAAHK
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ANQTFLSIMRDIDKITGQIQEVSAATEEMSAGTEEVNASLSLVSETATDVKKETLQTVKS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IQSQAVSIEQISIQSNKMKEKVGELTELVSKFNITE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MENVKLELLRNSKVGTKLNILIAISSIACIVLSLIGFLGLERGKSTSSNMYEDNLLPIEW
CCCCEEHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEE
IGIVESNFYHVNMNFMEIMLSKDEKRMSELIREMDGIRKENDHLLKQFEAKVISTKEKEL
EEEEECCEEEEEHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
YNTFHETFNELRTQMRKAQELGKSNNEEAYAYYLKEIEPNMQKSIQSIRELILYNSNDAE
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHH
LLQKENNNGAQNTMIMFVSISILAILIIIFIGYIIKSTIRKPLALLQKDMEKVAAGDLTT
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
RTSYKANNELGHIVQSFNSMLDNLQQLIANVKITTQEVISTTEGVLQDTKRASHISNEVV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
QTVLEVKTKIEGQVTSIQESSSSMEEITSGVQTVAESSAVVAEVAVTTAEQINIGSEVIN
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
HSILQMNSVHDVVEETSKVINKLVTRTQQIDTALAAITNIAEQTNLLALNAAIEAARAGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NGKGFAVVAAEVRDLAEQSKESAKEVNHLIKSIQQDTQDTVNVMQKGQQKAVEGKEAAHK
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ANQTFLSIMRDIDKITGQIQEVSAATEEMSAGTEEVNASLSLVSETATDVKKETLQTVKS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IQSQAVSIEQISIQSNKMKEKVGELTELVSKFNITE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA