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The map label for this gene is yvaP [H]

Identifier: 52142145

GI number: 52142145

Start: 3230168

End: 3230485

Strand: Direct

Name: yvaP [H]

Synonym: BCZK3098

Alternate gene names: 52142145

Gene position: 3230168-3230485 (Clockwise)

Preceding gene: 52142153

Following gene: 52142137

Centisome position: 60.94

GC content: 37.11

Gene sequence:

>318_bases
ATGAAGGATTCTACATTATGCCCTCGCTTTGAAAAAGGAATGAAATTTTTTAGTCAACGATGGACAGCACTCATTATTTA
CCAACTTTTCTCTGGACCTCAGCGCTTTTGTACGCTTGAATCTTCTCTTCCTGTTAGCGGAAGATTACTTTCAGAAAGAT
TGAAGGAATTAGAATTGGAAGGAATTGTAGAACGTAAAGTCTTTCCTGAGACACCAGTTCGTATAGAATATTCTTTAACT
CAAAAAGGATTTGCCTTAGAAGCTATTATTCGCGGAATAGAAGAATGGTCACAGGAATGGATAGAGCTTGAGGAATAA

Upstream 100 bases:

>100_bases
AGTATACATTTATAATTAATTTACGTCAAGTAATTAATTATAAAAAAATTTGTTACTAATAGTAATATGTTATATAATTT
ACTTTAGGAGGTGAAGGAAA

Downstream 100 bases:

>100_bases
TATAAAAGCTTTTTCGTATATAGTTTTAAGTAATCAAATTACAAATACCTATGATTAAAACGCTAGTTTTTCAAGCATTT
ATGAAAAATTAGCGTTTTTT

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MKDSTLCPRFEKGMKFFSQRWTALIIYQLFSGPQRFCTLESSLPVSGRLLSERLKELELEGIVERKVFPETPVRIEYSLT
QKGFALEAIIRGIEEWSQEWIELEE

Sequences:

>Translated_105_residues
MKDSTLCPRFEKGMKFFSQRWTALIIYQLFSGPQRFCTLESSLPVSGRLLSERLKELELEGIVERKVFPETPVRIEYSLT
QKGFALEAIIRGIEEWSQEWIELEE
>Mature_105_residues
MKDSTLCPRFEKGMKFFSQRWTALIIYQLFSGPQRFCTLESSLPVSGRLLSERLKELELEGIVERKVFPETPVRIEYSLT
QKGFALEAIIRGIEEWSQEWIELEE

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 12345; Mature: 12345

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDSTLCPRFEKGMKFFSQRWTALIIYQLFSGPQRFCTLESSLPVSGRLLSERLKELELE
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEECCCCCCCCHHHHHHHHHHHHHH
GIVERKVFPETPVRIEYSLTQKGFALEAIIRGIEEWSQEWIELEE
HHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKDSTLCPRFEKGMKFFSQRWTALIIYQLFSGPQRFCTLESSLPVSGRLLSERLKELELE
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEECCCCCCCCHHHHHHHHHHHHHH
GIVERKVFPETPVRIEYSLTQKGFALEAIIRGIEEWSQEWIELEE
HHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]