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The map label for this gene is nsr [H]

Identifier: 52142078

GI number: 52142078

Start: 3291126

End: 3291818

Strand: Reverse

Name: nsr [H]

Synonym: BCZK3165

Alternate gene names: 52142078

Gene position: 3291818-3291126 (Counterclockwise)

Preceding gene: 52142075

Following gene: 52142077

Centisome position: 62.1

GC content: 32.32

Gene sequence:

>693_bases
ATGAAGAAAGTATGTAATTCTATTAAATTAGCAGAGTATATGAAACAAAATAATATTGATTCGTTTTTTAGTAATGATAT
GCAGCCGTATATGGAACTTATATTTTTTAAAAAGAATGAGTTTATTTGTAGAGAAAATGAAGAGATAGATTATTTATATT
TCTTCGTTGAAGGAAAAGCGAAAGCGTTTAACACATTAAGTAACGGGAAATCTGTATTATTATGCTTTTATGATAGCTTG
CAGTTACTTGGAGATGTGGAGTTAATTCATTCACAAAGGATTACTTCAAACGTACAAGTGATGGCAGATTCATATTGTGT
TGGTTTGCCTTTAGGGAAAGTGAGAAATCAACTATTTCATGATGCAAAATTTTTACGATGTATTTGCGGATCATTAGCAC
ATAAGTTAAATCGACTTTCCAAAAATAGTACAATTAATTTACTATATCCGCTTGAAAATAGACTTGCGAGCTACATGTTA
GCGGCAGGAGAAAGAGCAGCTCAGCATGGAAATCGAATTGTGTTTAGTGGAAATTTAACGGAAACAGCTGAATTGTTAGG
AACGAGTTATCGACATTTATTGCGCACGCTGAACACCTTTTGTGATAAAGAGATAATCAAGAAAAACAATGGTTGTTTTG
AAGTGGTAAATGTGGAAGTTTTGAGAGAATTGGCGGCAGATGTTTATAAATAG

Upstream 100 bases:

>100_bases
TGACTGTATCATGCTGAAATTGTGTATTACTATGACATATGTCATAGTGGAAGAAGAAAATTTTGATTACAATGGGGATG
AGTTGTAAAGGTGGGGGATT

Downstream 100 bases:

>100_bases
GAGGAGATTATAAATGATAACACCTATATTTAGAATTTTTGATATTGAAAAAGCAAAGCTATTTTACTTAGGTTTTATAG
GATTTAAAATGGATTGGGAA

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MKKVCNSIKLAEYMKQNNIDSFFSNDMQPYMELIFFKKNEFICRENEEIDYLYFFVEGKAKAFNTLSNGKSVLLCFYDSL
QLLGDVELIHSQRITSNVQVMADSYCVGLPLGKVRNQLFHDAKFLRCICGSLAHKLNRLSKNSTINLLYPLENRLASYML
AAGERAAQHGNRIVFSGNLTETAELLGTSYRHLLRTLNTFCDKEIIKKNNGCFEVVNVEVLRELAADVYK

Sequences:

>Translated_230_residues
MKKVCNSIKLAEYMKQNNIDSFFSNDMQPYMELIFFKKNEFICRENEEIDYLYFFVEGKAKAFNTLSNGKSVLLCFYDSL
QLLGDVELIHSQRITSNVQVMADSYCVGLPLGKVRNQLFHDAKFLRCICGSLAHKLNRLSKNSTINLLYPLENRLASYML
AAGERAAQHGNRIVFSGNLTETAELLGTSYRHLLRTLNTFCDKEIIKKNNGCFEVVNVEVLRELAADVYK
>Mature_230_residues
MKKVCNSIKLAEYMKQNNIDSFFSNDMQPYMELIFFKKNEFICRENEEIDYLYFFVEGKAKAFNTLSNGKSVLLCFYDSL
QLLGDVELIHSQRITSNVQVMADSYCVGLPLGKVRNQLFHDAKFLRCICGSLAHKLNRLSKNSTINLLYPLENRLASYML
AAGERAAQHGNRIVFSGNLTETAELLGTSYRHLLRTLNTFCDKEIIKKNNGCFEVVNVEVLRELAADVYK

Specific function: Transcription regulator involved in mid-term, stationary-phase viability under nitrogen starvation. Might control expression of the salvage pathways or in some other way repress the recycling of nucleobases to nucleic acids and enhance their use as genera

COG id: COG0664

COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH crp-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788487, Length=215, Percent_Identity=30.2325581395349, Blast_Score=110, Evalue=8e-26,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018490
- InterPro:   IPR000595
- InterPro:   IPR012318
- InterPro:   IPR014710 [H]

Pfam domain/function: PF00027 cNMP_binding [H]

EC number: NA

Molecular weight: Translated: 26356; Mature: 26356

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: PS50042 CNMP_BINDING_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVCNSIKLAEYMKQNNIDSFFSNDMQPYMELIFFKKNEFICRENEEIDYLYFFVEGKA
CCHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHCCCCEEECCCCCCEEEEEEEECCH
KAFNTLSNGKSVLLCFYDSLQLLGDVELIHSQRITSNVQVMADSYCVGLPLGKVRNQLFH
HHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCHHEEECCEEECCCHHHHHHHHHH
DAKFLRCICGSLAHKLNRLSKNSTINLLYPLENRLASYMLAAGERAAQHGNRIVFSGNLT
HHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCEEEEECCCH
ETAELLGTSYRHLLRTLNTFCDKEIIKKNNGCFEVVNVEVLRELAADVYK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKVCNSIKLAEYMKQNNIDSFFSNDMQPYMELIFFKKNEFICRENEEIDYLYFFVEGKA
CCHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHCCCCEEECCCCCCEEEEEEEECCH
KAFNTLSNGKSVLLCFYDSLQLLGDVELIHSQRITSNVQVMADSYCVGLPLGKVRNQLFH
HHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCHHEEECCEEECCCHHHHHHHHHH
DAKFLRCICGSLAHKLNRLSKNSTINLLYPLENRLASYMLAAGERAAQHGNRIVFSGNLT
HHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCEEEEECCCH
ETAELLGTSYRHLLRTLNTFCDKEIIKKNNGCFEVVNVEVLRELAADVYK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]