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The map label for this gene is yoaR [H]

Identifier: 52142000

GI number: 52142000

Start: 3366489

End: 3367400

Strand: Reverse

Name: yoaR [H]

Synonym: BCZK3243

Alternate gene names: 52142000

Gene position: 3367400-3366489 (Counterclockwise)

Preceding gene: 52141996

Following gene: 52142001

Centisome position: 63.52

GC content: 37.72

Gene sequence:

>912_bases
TTGTTCCGTAAAGTAAAGGGTATATTAGTTGGGGTGTTATGTGTAGCTGTAGTGAGTGGTTGTGGTACAAAAGTAAGTGA
TGTTGCATTAGTAAGTGATATTGGTGGCCACACAGTAGAGGCTAAAGCAGAAGTACAGGATTCTATTAGTTTAGTAGATG
GTCGTACAGATACTGAAGTGAAAAAGCTAGATTTATCGAGTCTAGGCTATTTTGAAGACGAAGCAAAATTTAAAAAATCG
GTAACGAAGGTTGCTAGCGAGGTTGGGAAAAGCGTTGATAAAAAGATGGTTCCATCACGTGTAGCACCTGATGGAAGTTG
GCAAGAAGGAAAGCCTTCTTATGAATTAATGGAAAAAGAATTAGTAGATAAATTATTAAACGTTGGTATGTGGGATTCTT
CCTATCAATTACCTATTGTTGAGAAAAAACCTACTGCAACATTAAGTGATGCACAGGGAAGTGGTACGGTGATTGGTAGA
TACGAAACGAATTTAGGTGGCTCAACAGGTGGCCGTATTGAAAATATTCGTTTGTCAGCAGCGAGCATAAATGGGGTTGT
ATTAGCAAAAGGAGACCGTTTCTCTTTCAATGCATTAATTGGTGATACAACGCCAGATAAAGGATATCAATTAGGAAAAG
AAATTGTAGATGGTAAATTAGTAGATGGATATGGTGGTGGCGTTTGTCAAACATCATCAACTTTATACAATGCAGCAGAT
CAAGCTGGTTTGAAAATGGTAGAGAGAACGACGCATTCTAAAACGGTAGGTTACGTTCCAAAAGGAAGAGATGCTACAAT
TGCATATCCATATCTAGACTTAGTATTTGAAAACACGAATGATGCACCTGTGAAACTTTATATGGGTATTCAGGGTGGAA
AGTTAGTTGCTGAAGTACATAAAATGAGATAA

Upstream 100 bases:

>100_bases
TTGTAACATTTTATAAATATATTGTAAAATGATTGTAACAAAACATACATAAAAATGAAATAATACATAAAAGTAATATT
GGGAAAAAGGGGAGAGTATA

Downstream 100 bases:

>100_bases
GAGTTATAAAGTCATCTTTTCTAAAAACTAGAAGAGGTGGCTTTTTTATTACGAAAATAAAAATGTGTATAAATTCTGAC
TTTTCATATTTACATAGGGT

Product: lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MFRKVKGILVGVLCVAVVSGCGTKVSDVALVSDIGGHTVEAKAEVQDSISLVDGRTDTEVKKLDLSSLGYFEDEAKFKKS
VTKVASEVGKSVDKKMVPSRVAPDGSWQEGKPSYELMEKELVDKLLNVGMWDSSYQLPIVEKKPTATLSDAQGSGTVIGR
YETNLGGSTGGRIENIRLSAASINGVVLAKGDRFSFNALIGDTTPDKGYQLGKEIVDGKLVDGYGGGVCQTSSTLYNAAD
QAGLKMVERTTHSKTVGYVPKGRDATIAYPYLDLVFENTNDAPVKLYMGIQGGKLVAEVHKMR

Sequences:

>Translated_303_residues
MFRKVKGILVGVLCVAVVSGCGTKVSDVALVSDIGGHTVEAKAEVQDSISLVDGRTDTEVKKLDLSSLGYFEDEAKFKKS
VTKVASEVGKSVDKKMVPSRVAPDGSWQEGKPSYELMEKELVDKLLNVGMWDSSYQLPIVEKKPTATLSDAQGSGTVIGR
YETNLGGSTGGRIENIRLSAASINGVVLAKGDRFSFNALIGDTTPDKGYQLGKEIVDGKLVDGYGGGVCQTSSTLYNAAD
QAGLKMVERTTHSKTVGYVPKGRDATIAYPYLDLVFENTNDAPVKLYMGIQGGKLVAEVHKMR
>Mature_303_residues
MFRKVKGILVGVLCVAVVSGCGTKVSDVALVSDIGGHTVEAKAEVQDSISLVDGRTDTEVKKLDLSSLGYFEDEAKFKKS
VTKVASEVGKSVDKKMVPSRVAPDGSWQEGKPSYELMEKELVDKLLNVGMWDSSYQLPIVEKKPTATLSDAQGSGTVIGR
YETNLGGSTGGRIENIRLSAASINGVVLAKGDRFSFNALIGDTTPDKGYQLGKEIVDGKLVDGYGGGVCQTSSTLYNAAD
QAGLKMVERTTHSKTVGYVPKGRDATIAYPYLDLVFENTNDAPVKLYMGIQGGKLVAEVHKMR

Specific function: Unknown

COG id: COG2720

COG function: function code V; Uncharacterized vancomycin resistance protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022029
- InterPro:   IPR007391 [H]

Pfam domain/function: PF12229 PG_binding_4; PF04294 VanW [H]

EC number: NA

Molecular weight: Translated: 32368; Mature: 32368

Theoretical pI: Translated: 7.43; Mature: 7.43

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRKVKGILVGVLCVAVVSGCGTKVSDVALVSDIGGHTVEAKAEVQDSISLVDGRTDTEV
CCHHHHHHHHHHHHHHHHHCCCCCHHHHHEEHHCCCCEEEEHHHHHHHHHEECCCCCCHH
KKLDLSSLGYFEDEAKFKKSVTKVASEVGKSVDKKMVPSRVAPDGSWQEGKPSYELMEKE
HHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHH
LVDKLLNVGMWDSSYQLPIVEKKPTATLSDAQGSGTVIGRYETNLGGSTGGRIENIRLSA
HHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEEE
ASINGVVLAKGDRFSFNALIGDTTPDKGYQLGKEIVDGKLVDGYGGGVCQTSSTLYNAAD
EECCEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHCCEEEECCCCCEEECCHHHHHHHH
QAGLKMVERTTHSKTVGYVPKGRDATIAYPYLDLVFENTNDAPVKLYMGIQGGKLVAEVH
HHHHHHHHHHCCCCEECCCCCCCCCEEEEEEEEEEEECCCCCCEEEEEECCCCHHHHHHH
KMR
HCC
>Mature Secondary Structure
MFRKVKGILVGVLCVAVVSGCGTKVSDVALVSDIGGHTVEAKAEVQDSISLVDGRTDTEV
CCHHHHHHHHHHHHHHHHHCCCCCHHHHHEEHHCCCCEEEEHHHHHHHHHEECCCCCCHH
KKLDLSSLGYFEDEAKFKKSVTKVASEVGKSVDKKMVPSRVAPDGSWQEGKPSYELMEKE
HHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHH
LVDKLLNVGMWDSSYQLPIVEKKPTATLSDAQGSGTVIGRYETNLGGSTGGRIENIRLSA
HHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEEE
ASINGVVLAKGDRFSFNALIGDTTPDKGYQLGKEIVDGKLVDGYGGGVCQTSSTLYNAAD
EECCEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHCCEEEECCCCCEEECCHHHHHHHH
QAGLKMVERTTHSKTVGYVPKGRDATIAYPYLDLVFENTNDAPVKLYMGIQGGKLVAEVH
HHHHHHHHHHCCCCEECCCCCCCCCEEEEEEEEEEEECCCCCCEEEEEECCCCHHHHHHH
KMR
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]