Click here to switch to the map view.

The map label for this gene is yrhF [H]

Identifier: 52141966

GI number: 52141966

Start: 3404939

End: 3405283

Strand: Reverse

Name: yrhF [H]

Synonym: BCZK3279

Alternate gene names: 52141966

Gene position: 3405283-3404939 (Counterclockwise)

Preceding gene: 52141963

Following gene: 52141965

Centisome position: 64.24

GC content: 34.78

Gene sequence:

>345_bases
ATGTCAAAAAAAGTACATGAATTTAATGATATGATCCGAAAACTTCGAAAGGAACTTTTCGGAAAAGGACCAGAACGAAT
TCATACTGTTTTTGCTGAAAATATGGCGATTGCGACCCTTTATGGAAACTTAACACCTACTGAAAAATTCATTTCAAGTA
CGATGGACGGTGCGGAAATGGTTCATATGGCTAGAACGAAAATGATTCAAGAAGTGTATGCTGCAAATTCCCGTGAACAT
TTGGAGGAACTTGTTGGAGCGAAATTAGTGAATTTGTTTTCAGATATGAAAGTAGAAGAAGATATTGCAGTTTCGGTATT
TGTTTTTGATAAAAATATAACGTGA

Upstream 100 bases:

>100_bases
CCTTTTCGCCCAAATGTTTGTACGAAATAGTTTGGGCGGAAGGCTCATTTTGGTAAAATATATAATAAAATAAAATGAGG
TTTGTGGGAGGTATAATGGT

Downstream 100 bases:

>100_bases
GAGAAGGATACTGATCGTGAAACCGATACAGGTAGAAAGAGAAATCTTTCGTTATGAACAAGGGGCGTTTAAACATATAG
AGGACAGCATTGTAACAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 113

Protein sequence:

>114_residues
MSKKVHEFNDMIRKLRKELFGKGPERIHTVFAENMAIATLYGNLTPTEKFISSTMDGAEMVHMARTKMIQEVYAANSREH
LEELVGAKLVNLFSDMKVEEDIAVSVFVFDKNIT

Sequences:

>Translated_114_residues
MSKKVHEFNDMIRKLRKELFGKGPERIHTVFAENMAIATLYGNLTPTEKFISSTMDGAEMVHMARTKMIQEVYAANSREH
LEELVGAKLVNLFSDMKVEEDIAVSVFVFDKNIT
>Mature_113_residues
SKKVHEFNDMIRKLRKELFGKGPERIHTVFAENMAIATLYGNLTPTEKFISSTMDGAEMVHMARTKMIQEVYAANSREHL
EELVGAKLVNLFSDMKVEEDIAVSVFVFDKNIT

Specific function: Unknown

COG id: COG5609

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018745 [H]

Pfam domain/function: PF10057 DUF2294 [H]

EC number: NA

Molecular weight: Translated: 13011; Mature: 12880

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.0 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.2 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKKVHEFNDMIRKLRKELFGKGPERIHTVFAENMAIATLYGNLTPTEKFISSTMDGAEM
CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHH
VHMARTKMIQEVYAANSREHLEELVGAKLVNLFSDMKVEEDIAVSVFVFDKNIT
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCC
>Mature Secondary Structure 
SKKVHEFNDMIRKLRKELFGKGPERIHTVFAENMAIATLYGNLTPTEKFISSTMDGAEM
CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHH
VHMARTKMIQEVYAANSREHLEELVGAKLVNLFSDMKVEEDIAVSVFVFDKNIT
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9308178; 9384377 [H]