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The map label for this gene is gerKA [H]

Identifier: 52141961

GI number: 52141961

Start: 3409280

End: 3410818

Strand: Direct

Name: gerKA [H]

Synonym: BCZK3282

Alternate gene names: 52141961

Gene position: 3409280-3410818 (Clockwise)

Preceding gene: 52141980

Following gene: 52141960

Centisome position: 64.31

GC content: 37.56

Gene sequence:

>1539_bases
ATGGGGCCTTTTAATAAATGGATACGTGGTGAAAAATCTTTTTCTGGACAAGAGCAAGCTGATCACATATTAAATAAATC
TATCTCTTCTTCCCTTTCCCTTAATTTAAAGCACTTGTCCAAATTGTTTAGTGGTATTCCAGAATTAATTACACGTACTT
TTCTGTTAAAAAACGGAAAAGAATCCGCTCTTATATATATGGAAGGAATTGTAGATAAAACTGTTATTAATGTAGATATT
CTTCGTCCCCTCTTATTTAAAGAATGGAATGAGGACGATTTTTGGGAATCTTCTATTTCTATCGGAAATATTAAAGAAGT
TCAGAAGTGGACAGACATTGAACAATCCCTTTTACATGGAAAAAGCATTTTATTTATAAACGGGCAACTATCTGCTTTAG
AACTGGATACACAAGCGGCACCAAAAAGGAGTATTGAAGAACCTACAACCGAGAGCTCACTAAAAAGCTCACACGAAGGA
TTTAATGAAGTCGCGAGCGACAGTATCGCGCTTATTCGCCGATATATTCCAAACCGCGAATTAAAAGTGCAAGCGTTCAC
TGTCGGTGAGCGGGCCGCTTCTAAAGTTTTTATGCTTTATTTAGCGGATGTTGCAAACGAAGATGTCATACAAGAAATGT
CATGCCGCATCGAATCCATTAAAGTGGATGCCATTCTTACTACCGGTGAATTAGAAGGGTTTGTTGAAGATAATTCTTAT
ACTCTTTTTCCGCAATTATCAATAACTGAACGTCCTGATACAACAGCACATCACATTCTAAACGGGCGTATCGCTGTTGT
TGTAGATCGTTCACCAGGCGTATTAATTGGACCTATGACCTTTTCGTCTTTTTTTCAGACGATAGATGATTACAGCTTCA
GACCAATAATCCCATCTTTCATACGATTACTTCGTTTCACCGGATTATTTATTGCAATATTTGCTCCTGCTCTTTATATC
GCTATGATTTCCTTCCATTATGAAGTGATTCCACTTAAATTATTGTTAACAATTGGAGAATCGCGAGCTAAAATTCCTTT
TCCCCCTATATTAGAAGCACTTTTGATGGAATTAGTACTGGAAATGCTCCGCGAAGCTGCAGTTCGACTTCCTGGTCCCG
TTGGACAAACGATTGGCGTAGTAGGAGGGATCGTCATTGGACAAGCTGCAGTTCAAGCAGGAATAGTAAGTAATGTCATG
GTTATCGTCGTATCTATTACTGCAGTCGCTTCTTTTATCATTCCTAACATGGAAATGTCAGCAGGAATTCGCCTTCTTCG
CTTTCCGATGATGATAATTGCCTCTTTATTTGGTGTCATAGGAATTATGGTTGGGATGGCAATCATTATTATTCATATAC
TTTCTATGGAATCTCTTGGTGTTCCTTATGGTAGTCCTTTTTCTCCGTTATTTGCTTCGGATTTAAAAGATATTCTTGTA
CGTTTACCATGGAAAATAATGAAGAAACGCCCACTATCTCTTAACTTAAAACAAGAAAATCGACAAAGTGATATAGAAGA
AATGGAGGAAGATAAGTGA

Upstream 100 bases:

>100_bases
CAGCCCGACCCCTACCTAACTTCTTTGCTTCCGCTGAATTTTGAGGGGGGCTTACTGCCCATTAAAGCGGGATAAAACAT
AACAAGGAGTAAGCGCATAA

Downstream 100 bases:

>100_bases
CAAAGCGTGCAAAGAGGGAGATTAGTTTATTTCAATACATTTTAACGATTAGTGGTGTTCAAGTAGGATTCGGTGTCCTT
ACACTTCCGCGTGAAGTTGC

Product: spore germination protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 512; Mature: 511

Protein sequence:

>512_residues
MGPFNKWIRGEKSFSGQEQADHILNKSISSSLSLNLKHLSKLFSGIPELITRTFLLKNGKESALIYMEGIVDKTVINVDI
LRPLLFKEWNEDDFWESSISIGNIKEVQKWTDIEQSLLHGKSILFINGQLSALELDTQAAPKRSIEEPTTESSLKSSHEG
FNEVASDSIALIRRYIPNRELKVQAFTVGERAASKVFMLYLADVANEDVIQEMSCRIESIKVDAILTTGELEGFVEDNSY
TLFPQLSITERPDTTAHHILNGRIAVVVDRSPGVLIGPMTFSSFFQTIDDYSFRPIIPSFIRLLRFTGLFIAIFAPALYI
AMISFHYEVIPLKLLLTIGESRAKIPFPPILEALLMELVLEMLREAAVRLPGPVGQTIGVVGGIVIGQAAVQAGIVSNVM
VIVVSITAVASFIIPNMEMSAGIRLLRFPMMIIASLFGVIGIMVGMAIIIIHILSMESLGVPYGSPFSPLFASDLKDILV
RLPWKIMKKRPLSLNLKQENRQSDIEEMEEDK

Sequences:

>Translated_512_residues
MGPFNKWIRGEKSFSGQEQADHILNKSISSSLSLNLKHLSKLFSGIPELITRTFLLKNGKESALIYMEGIVDKTVINVDI
LRPLLFKEWNEDDFWESSISIGNIKEVQKWTDIEQSLLHGKSILFINGQLSALELDTQAAPKRSIEEPTTESSLKSSHEG
FNEVASDSIALIRRYIPNRELKVQAFTVGERAASKVFMLYLADVANEDVIQEMSCRIESIKVDAILTTGELEGFVEDNSY
TLFPQLSITERPDTTAHHILNGRIAVVVDRSPGVLIGPMTFSSFFQTIDDYSFRPIIPSFIRLLRFTGLFIAIFAPALYI
AMISFHYEVIPLKLLLTIGESRAKIPFPPILEALLMELVLEMLREAAVRLPGPVGQTIGVVGGIVIGQAAVQAGIVSNVM
VIVVSITAVASFIIPNMEMSAGIRLLRFPMMIIASLFGVIGIMVGMAIIIIHILSMESLGVPYGSPFSPLFASDLKDILV
RLPWKIMKKRPLSLNLKQENRQSDIEEMEEDK
>Mature_511_residues
GPFNKWIRGEKSFSGQEQADHILNKSISSSLSLNLKHLSKLFSGIPELITRTFLLKNGKESALIYMEGIVDKTVINVDIL
RPLLFKEWNEDDFWESSISIGNIKEVQKWTDIEQSLLHGKSILFINGQLSALELDTQAAPKRSIEEPTTESSLKSSHEGF
NEVASDSIALIRRYIPNRELKVQAFTVGERAASKVFMLYLADVANEDVIQEMSCRIESIKVDAILTTGELEGFVEDNSYT
LFPQLSITERPDTTAHHILNGRIAVVVDRSPGVLIGPMTFSSFFQTIDDYSFRPIIPSFIRLLRFTGLFIAIFAPALYIA
MISFHYEVIPLKLLLTIGESRAKIPFPPILEALLMELVLEMLREAAVRLPGPVGQTIGVVGGIVIGQAAVQAGIVSNVMV
IVVSITAVASFIIPNMEMSAGIRLLRFPMMIIASLFGVIGIMVGMAIIIIHILSMESLGVPYGSPFSPLFASDLKDILVR
LPWKIMKKRPLSLNLKQENRQSDIEEMEEDK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gerABKA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004995 [H]

Pfam domain/function: PF03323 GerA [H]

EC number: NA

Molecular weight: Translated: 56951; Mature: 56819

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGPFNKWIRGEKSFSGQEQADHILNKSISSSLSLNLKHLSKLFSGIPELITRTFLLKNGK
CCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHEECHHHHHHHHHHHHHHHHHHHHHCCCC
ESALIYMEGIVDKTVINVDILRPLLFKEWNEDDFWESSISIGNIKEVQKWTDIEQSLLHG
CCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHCC
KSILFINGQLSALELDTQAAPKRSIEEPTTESSLKSSHEGFNEVASDSIALIRRYIPNRE
CEEEEECCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
LKVQAFTVGERAASKVFMLYLADVANEDVIQEMSCRIESIKVDAILTTGELEGFVEDNSY
EEEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEEEEEEEEEECCCCCEEECCCE
TLFPQLSITERPDTTAHHILNGRIAVVVDRSPGVLIGPMTFSSFFQTIDDYSFRPIIPSF
EEEEEEEECCCCCCHHHHHHCCEEEEEEECCCCEEECCHHHHHHHHHHHCCCCCCHHHHH
IRLLRFTGLFIAIFAPALYIAMISFHYEVIPLKLLLTIGESRAKIPFPPILEALLMELVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
EMLREAAVRLPGPVGQTIGVVGGIVIGQAAVQAGIVSNVMVIVVSITAVASFIIPNMEMS
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
AGIRLLRFPMMIIASLFGVIGIMVGMAIIIIHILSMESLGVPYGSPFSPLFASDLKDILV
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
RLPWKIMKKRPLSLNLKQENRQSDIEEMEEDK
HCCHHHHHCCCCEECCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GPFNKWIRGEKSFSGQEQADHILNKSISSSLSLNLKHLSKLFSGIPELITRTFLLKNGK
CCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHEECHHHHHHHHHHHHHHHHHHHHHCCCC
ESALIYMEGIVDKTVINVDILRPLLFKEWNEDDFWESSISIGNIKEVQKWTDIEQSLLHG
CCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHCC
KSILFINGQLSALELDTQAAPKRSIEEPTTESSLKSSHEGFNEVASDSIALIRRYIPNRE
CEEEEECCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
LKVQAFTVGERAASKVFMLYLADVANEDVIQEMSCRIESIKVDAILTTGELEGFVEDNSY
EEEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEEEEEEEEEECCCCCEEECCCE
TLFPQLSITERPDTTAHHILNGRIAVVVDRSPGVLIGPMTFSSFFQTIDDYSFRPIIPSF
EEEEEEEECCCCCCHHHHHHCCEEEEEEECCCCEEECCHHHHHHHHHHHCCCCCCHHHHH
IRLLRFTGLFIAIFAPALYIAMISFHYEVIPLKLLLTIGESRAKIPFPPILEALLMELVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
EMLREAAVRLPGPVGQTIGVVGGIVIGQAAVQAGIVSNVMVIVVSITAVASFIIPNMEMS
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
AGIRLLRFPMMIIASLFGVIGIMVGMAIIIIHILSMESLGVPYGSPFSPLFASDLKDILV
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
RLPWKIMKKRPLSLNLKQENRQSDIEEMEEDK
HCCHHHHHCCCCEECCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9272861; 9384377 [H]