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The map label for this gene is 52141906

Identifier: 52141906

GI number: 52141906

Start: 3471422

End: 3471850

Strand: Direct

Name: 52141906

Synonym: BCZK3338

Alternate gene names: NA

Gene position: 3471422-3471850 (Clockwise)

Preceding gene: 52141907

Following gene: 52141896

Centisome position: 65.49

GC content: 36.36

Gene sequence:

>429_bases
TTGAATATTGAGCAACAATTATATGATGTGGTGAAACAGTTAATTGAACAAAGATATCCAAACGATTGGGGTGGAGCCGC
AGCGATCCGTGTAGAAGATGGAACAATTTATACAAGTGTTGCTCCAGGCGTAATAAATGCTTCAACAGAACTTTGTATGG
AAACAGGTGCAATTTTAGAAGCTCATAAATTTCAAAAGAAAGTTACACATTCTATTTGTCTTGCCAGAGAAAATGAGCAT
TCTGAATTAAAGGTACTCTCGCCTTGTGGTGTATGCCAAGAACGTTTATTTTATTGGGGACCAGAAGTACAGTGTGCGAT
TACAAATGCGAAACAAGATATTATTTTTAAACCTTTAAAAGAGTTGCAACCATATCATTGGACAGAAGCATATCATGATG
AAATGGCAAAAGAATGGAGTACGAGATAG

Upstream 100 bases:

>100_bases
ATTAAATGTTCATTCCATTTTTTTGTTTATGTTATTATGATAAAAGAAAGAATATTTCGAAATAACAAACCTGAATTTGG
GCAGAAATGAGGAAAAGAAA

Downstream 100 bases:

>100_bases
GGGAATAATCCCCATTATTTTCCTGATGACAATAAAAAAATGTCACGGCCTTTTCCAAATAAAACATCGGAAAAAGCCGT
GACATAACAATTATTTTATA

Product: cytidine deaminase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MNIEQQLYDVVKQLIEQRYPNDWGGAAAIRVEDGTIYTSVAPGVINASTELCMETGAILEAHKFQKKVTHSICLARENEH
SELKVLSPCGVCQERLFYWGPEVQCAITNAKQDIIFKPLKELQPYHWTEAYHDEMAKEWSTR

Sequences:

>Translated_142_residues
MNIEQQLYDVVKQLIEQRYPNDWGGAAAIRVEDGTIYTSVAPGVINASTELCMETGAILEAHKFQKKVTHSICLARENEH
SELKVLSPCGVCQERLFYWGPEVQCAITNAKQDIIFKPLKELQPYHWTEAYHDEMAKEWSTR
>Mature_142_residues
MNIEQQLYDVVKQLIEQRYPNDWGGAAAIRVEDGTIYTSVAPGVINASTELCMETGAILEAHKFQKKVTHSICLARENEH
SELKVLSPCGVCQERLFYWGPEVQCAITNAKQDIIFKPLKELQPYHWTEAYHDEMAKEWSTR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16271; Mature: 16271

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIEQQLYDVVKQLIEQRYPNDWGGAAAIRVEDGTIYTSVAPGVINASTELCMETGAILE
CCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCEEEEECCCCHHCCHHHHHHHHHHHHH
AHKFQKKVTHSICLARENEHSELKVLSPCGVCQERLFYWGPEVQCAITNAKQDIIFKPLK
HHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHCCCCEEEEECCCCHHHHHHHHH
ELQPYHWTEAYHDEMAKEWSTR
HCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNIEQQLYDVVKQLIEQRYPNDWGGAAAIRVEDGTIYTSVAPGVINASTELCMETGAILE
CCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCEEEEECCCCHHCCHHHHHHHHHHHHH
AHKFQKKVTHSICLARENEHSELKVLSPCGVCQERLFYWGPEVQCAITNAKQDIIFKPLK
HHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHCCCCEEEEECCCCHHHHHHHHH
ELQPYHWTEAYHDEMAKEWSTR
HCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA