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The map label for this gene is ymfN [H]

Identifier: 52141819

GI number: 52141819

Start: 3560288

End: 3561358

Strand: Reverse

Name: ymfN [H]

Synonym: BCZK3427

Alternate gene names: 52141819

Gene position: 3561358-3560288 (Counterclockwise)

Preceding gene: 52141818

Following gene: 52141820

Centisome position: 67.18

GC content: 36.97

Gene sequence:

>1071_bases
TTGGAAATCCATGCTTGGAAAGATAAAAATTTATATGATGTTATAGTGGATGGTACGTCTTCACGAGAACAGCCAATGAT
ATTTATGATTACAACAGCCGGAACTGTCCGAGAGTCAGTGTATGATATGAAATATGAAGAAGCAGAAATGTTGTTAAATG
GACTTGATGATCCGGATGGATATAAAGATGAACGTTTTTTACCCATAATCTACGAGCTGGATAAACGAGAGGAATGGACT
GACCCGTCAAAGTGGAAGAAAGCCAACCCTGGGCTTGGAACGATAAAAAAGGTAGACCAACTTGAAACAAAGGTAAACAA
GGCGAAAGCAAATTCTTTGTTAGTAAAAAACTTACTAACAAAAGATTTTAATATAAGAGAAACCTCAACAGAGGCATGGC
TGACTTTTGAACAACTAAATAATCCTGATACTTTCGATATAGAAAAGTTAAAGCCATCCTATGGAATTGGTGGTTGCGAT
TTATCTTCAACTACCGATTTAACAGCAGCGAAGGTTATTTTTATGGTTCCAGAGGACCCGCATATTTATGTGAAGCAGAT
GTATTGGCTTCCTGAAGATTTATTGGAGCAGCGAAGTAAAGAAGATAAAATTCCATATAATTTATGGCACGAGCAAGGAA
TATTAAGAACAACTCCGGGAAATTCCGTTCATTATAAATTTGTCACGAAATGGTTCTTAGAAATACGAGATGAATATGGC
ATTTATCTCCCTTGGATTGGCTATGATAAATGGTCAGCGAATTACTGGGTTGAGGACATGCAAGGGTATTTCGGGAAGGA
AGCGATGATTCCTATCGCACAAGGTAAACAGACCCTTTCTAGCCCGATGAAACTTTTAGGGGCTGACTTAGAATCTAAGC
TAATAAACTATAATAACCACACGATTGACAAGTGGTGTCTTTCCAACACAGCCATAGATGTTGATAAAAATTTAAATATA
CAACCAAATAAAACAAAGAACCAACGACGTCGTATTGATGGCACAGCAGCACTTTTAAATGCATATGTAGTTCTTCAAGA
AAAACGAAATGACTACCTCAACATGATTTAA

Upstream 100 bases:

>100_bases
AGTGTCCGACACCTTAACGATTTAATCGAAGGTGATGATGTATGCTGAACTTGTTGGTGACAACAAGAAGTAGAGGATAA
AAAGCCTTTACGATAACAAA

Downstream 100 bases:

>100_bases
GAAGGAGGTGAGAATTTGGGGTTATTTGATAAGATATTTGGAAAGAAACAGGCTCCTACTACAACTCGTTTTGAAATGAT
AAACGATAATGGTGGAGGTT

Product: terminase large subunit, C-terminal region

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 356; Mature: 356

Protein sequence:

>356_residues
MEIHAWKDKNLYDVIVDGTSSREQPMIFMITTAGTVRESVYDMKYEEAEMLLNGLDDPDGYKDERFLPIIYELDKREEWT
DPSKWKKANPGLGTIKKVDQLETKVNKAKANSLLVKNLLTKDFNIRETSTEAWLTFEQLNNPDTFDIEKLKPSYGIGGCD
LSSTTDLTAAKVIFMVPEDPHIYVKQMYWLPEDLLEQRSKEDKIPYNLWHEQGILRTTPGNSVHYKFVTKWFLEIRDEYG
IYLPWIGYDKWSANYWVEDMQGYFGKEAMIPIAQGKQTLSSPMKLLGADLESKLINYNNHTIDKWCLSNTAIDVDKNLNI
QPNKTKNQRRRIDGTAALLNAYVVLQEKRNDYLNMI

Sequences:

>Translated_356_residues
MEIHAWKDKNLYDVIVDGTSSREQPMIFMITTAGTVRESVYDMKYEEAEMLLNGLDDPDGYKDERFLPIIYELDKREEWT
DPSKWKKANPGLGTIKKVDQLETKVNKAKANSLLVKNLLTKDFNIRETSTEAWLTFEQLNNPDTFDIEKLKPSYGIGGCD
LSSTTDLTAAKVIFMVPEDPHIYVKQMYWLPEDLLEQRSKEDKIPYNLWHEQGILRTTPGNSVHYKFVTKWFLEIRDEYG
IYLPWIGYDKWSANYWVEDMQGYFGKEAMIPIAQGKQTLSSPMKLLGADLESKLINYNNHTIDKWCLSNTAIDVDKNLNI
QPNKTKNQRRRIDGTAALLNAYVVLQEKRNDYLNMI
>Mature_356_residues
MEIHAWKDKNLYDVIVDGTSSREQPMIFMITTAGTVRESVYDMKYEEAEMLLNGLDDPDGYKDERFLPIIYELDKREEWT
DPSKWKKANPGLGTIKKVDQLETKVNKAKANSLLVKNLLTKDFNIRETSTEAWLTFEQLNNPDTFDIEKLKPSYGIGGCD
LSSTTDLTAAKVIFMVPEDPHIYVKQMYWLPEDLLEQRSKEDKIPYNLWHEQGILRTTPGNSVHYKFVTKWFLEIRDEYG
IYLPWIGYDKWSANYWVEDMQGYFGKEAMIPIAQGKQTLSSPMKLLGADLESKLINYNNHTIDKWCLSNTAIDVDKNLNI
QPNKTKNQRRRIDGTAALLNAYVVLQEKRNDYLNMI

Specific function: Unknown

COG id: COG4626

COG function: function code R; Phage terminase-like protein, large subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phage terminase family [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000524
- InterPro:   IPR005021
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00392 GntR; PF03354 Terminase_1 [H]

EC number: NA

Molecular weight: Translated: 41393; Mature: 41393

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIHAWKDKNLYDVIVDGTSSREQPMIFMITTAGTVRESVYDMKYEEAEMLLNGLDDPDG
CCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCHHHHHHHHCCHHHHHHHHHCCCCCCC
YKDERFLPIIYELDKREEWTDPSKWKKANPGLGTIKKVDQLETKVNKAKANSLLVKNLLT
CCCCCEEEEEEEECCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KDFNIRETSTEAWLTFEQLNNPDTFDIEKLKPSYGIGGCDLSSTTDLTAAKVIFMVPEDP
CCCCCEECCHHHEEEHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCC
HIYVKQMYWLPEDLLEQRSKEDKIPYNLWHEQGILRTTPGNSVHYKFVTKWFLEIRDEYG
CEEEEEEECCCHHHHHHCCCCCCCCCCHHHCCCEEEECCCCCEEHHHHHHHHHHHHHCCC
IYLPWIGYDKWSANYWVEDMQGYFGKEAMIPIAQGKQTLSSPMKLLGADLESKLINYNNH
EEEEECCCCCCCCCCHHHHHHHHCCCCEEEEHHCCHHHHHHHHHHHCCCHHHHHCCCCCC
TIDKWCLSNTAIDVDKNLNIQPNKTKNQRRRIDGTAALLNAYVVLQEKRNDYLNMI
CHHHHHHCCCEEEECCCCCCCCCCCHHHHHHCCHHHHHHHHHHEEEHHCCHHCCCC
>Mature Secondary Structure
MEIHAWKDKNLYDVIVDGTSSREQPMIFMITTAGTVRESVYDMKYEEAEMLLNGLDDPDG
CCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCHHHHHHHHCCHHHHHHHHHCCCCCCC
YKDERFLPIIYELDKREEWTDPSKWKKANPGLGTIKKVDQLETKVNKAKANSLLVKNLLT
CCCCCEEEEEEEECCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KDFNIRETSTEAWLTFEQLNNPDTFDIEKLKPSYGIGGCDLSSTTDLTAAKVIFMVPEDP
CCCCCEECCHHHEEEHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCC
HIYVKQMYWLPEDLLEQRSKEDKIPYNLWHEQGILRTTPGNSVHYKFVTKWFLEIRDEYG
CEEEEEEECCCHHHHHHCCCCCCCCCCHHHCCCEEEECCCCCEEHHHHHHHHHHHHHCCC
IYLPWIGYDKWSANYWVEDMQGYFGKEAMIPIAQGKQTLSSPMKLLGADLESKLINYNNH
EEEEECCCCCCCCCCHHHHHHHHCCCCEEEEHHCCHHHHHHHHHHHCCCHHHHHCCCCCC
TIDKWCLSNTAIDVDKNLNIQPNKTKNQRRRIDGTAALLNAYVVLQEKRNDYLNMI
CHHHHHHCCCEEEECCCCCCCCCCCHHHHHHCCHHHHHHHHHHEEEHHCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]