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The map label for this gene is immR [H]

Identifier: 52141788

GI number: 52141788

Start: 3583916

End: 3584353

Strand: Direct

Name: immR [H]

Synonym: BCZK3459

Alternate gene names: 52141788

Gene position: 3583916-3584353 (Clockwise)

Preceding gene: 52141801

Following gene: 52141785

Centisome position: 67.61

GC content: 34.47

Gene sequence:

>438_bases
GTGAACAATATGATAGGTCTTAGAATAAAATCTTTACGAAAAAAAGAAAATTTAACACAAAAACAGCTCGCTGAAAAAAT
CGGAGTATCCCAAAGGATGATAGGCTACTATGAATCAGAAGAAAGATTCCCTCCACATGATGTCCTAAGTAAATTAGCTG
ATTGTTTTTCAGTTTCTGCTGACTATTTACTAGGACGAGCTGTTACAGACCAACCAAAAGAGCAATTAACACAGAAAGAT
GAAAAAGACATAGCAAAAAGAATGGAAGAAATAAAAAGAGATCTTCAAGGCGAAGACGGATTAATGTTCTCTGGTGAGCC
TATGAGTGAAGAAGCTGTGGAATCTTTATTAGATGCAATGGAGTACATCGTGAAACAAACTAAAGTAATCAATAAAAAAT
ACGTTCCTAAGAAATATCGTAGTACTGACGATAACTGA

Upstream 100 bases:

>100_bases
TCTAAATATAGATTACAGAACTTTTTGTTCTATGTCAATGCAAAAAAGAACAATTTGTGCTAAACTTTTTTTAAAGTGAA
CAATTAGTTCAATTAGAGAG

Downstream 100 bases:

>100_bases
TGCGAGCTTAGGAGGGAAAACATTGAAATTCGTCATAAGAGATCTAGTCCAACAACTTTGCACAAAATACAACACGACAA
ACCCCTATGAGCTTGCAGAT

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MNNMIGLRIKSLRKKENLTQKQLAEKIGVSQRMIGYYESEERFPPHDVLSKLADCFSVSADYLLGRAVTDQPKEQLTQKD
EKDIAKRMEEIKRDLQGEDGLMFSGEPMSEEAVESLLDAMEYIVKQTKVINKKYVPKKYRSTDDN

Sequences:

>Translated_145_residues
MNNMIGLRIKSLRKKENLTQKQLAEKIGVSQRMIGYYESEERFPPHDVLSKLADCFSVSADYLLGRAVTDQPKEQLTQKD
EKDIAKRMEEIKRDLQGEDGLMFSGEPMSEEAVESLLDAMEYIVKQTKVINKKYVPKKYRSTDDN
>Mature_145_residues
MNNMIGLRIKSLRKKENLTQKQLAEKIGVSQRMIGYYESEERFPPHDVLSKLADCFSVSADYLLGRAVTDQPKEQLTQKD
EKDIAKRMEEIKRDLQGEDGLMFSGEPMSEEAVESLLDAMEYIVKQTKVINKKYVPKKYRSTDDN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 16752; Mature: 16752

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNMIGLRIKSLRKKENLTQKQLAEKIGVSQRMIGYYESEERFPPHDVLSKLADCFSVSA
CCCCHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
DYLLGRAVTDQPKEQLTQKDEKDIAKRMEEIKRDLQGEDGLMFSGEPMSEEAVESLLDAM
HHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHHH
EYIVKQTKVINKKYVPKKYRSTDDN
HHHHHHHHHHHHHCCCHHHCCCCCC
>Mature Secondary Structure
MNNMIGLRIKSLRKKENLTQKQLAEKIGVSQRMIGYYESEERFPPHDVLSKLADCFSVSA
CCCCHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
DYLLGRAVTDQPKEQLTQKDEKDIAKRMEEIKRDLQGEDGLMFSGEPMSEEAVESLLDAM
HHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHHH
EYIVKQTKVINKKYVPKKYRSTDDN
HHHHHHHHHHHHHCCCHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]