Click here to switch to the map view.

The map label for this gene is sigG [H]

Identifier: 52141585

GI number: 52141585

Start: 3801032

End: 3801901

Strand: Reverse

Name: sigG [H]

Synonym: BCZK3662

Alternate gene names: 52141585

Gene position: 3801901-3801032 (Counterclockwise)

Preceding gene: 52141583

Following gene: 52141586

Centisome position: 71.72

GC content: 36.32

Gene sequence:

>870_bases
ATGAAAAATGAAGAGAAAACCGCATGCATAAAATCCCCTTCAAAGGAAATACTTTACACTGTACAGCAACTCCCGATAGG
AGGGAACACTTTGACGAGAAACAAAGTAGAAATTTGCGGTGTTGATACAGCTAAACTTCCCGTACTAAAAAATGATGAAA
TGCGTAAATTATTTCGTGAAATGCAAAGTGGAGAGATAAGCGCAAGAGAGAAATTAGTGAATGGAAACTTACGTCTTGTA
CTGAGCGTCATCCAAAGATTTAATAACAGAGGAGAATATGTTGACGATTTATTTCAAGTTGGTTGTATCGGACTTATGAA
ATCCATTGACAATTTTGATTTAGGCCAAAATGTAAAATTTTCAACGTATGCTGTGCCGATGATTATTGGGGAAATACGCA
GATATTTGCGTGATAACAATCCGATTCGCGTATCTCGCTCATTACGAGATATTGCGTATAAAGCGTTACAAGTAAGAGAA
AAGTTGATTGCAGAAAATTCAAAAGAACCAACAGCGATGGATATTGCAAAAGTGCTTGAAGTGACTCATGAAGAAATCGT
TTTTGCTTTAGATGCAATTCAAGATCCAGTTTCATTATTTGAGCCGATTTATAACGATGGGGGAGATCCTATCTTTGTTA
TGGATCAGTTAAGTGATGAAAAACAAAAGGACGAGCAGTGGGTTGAAGAGCTAGCACTAAAAGAAGGAATGAAGCGTTTA
AATGATCGTGAGAAAATGATTATTCGCAAACGTTTCTTCCAAGGGAAAACACAAATGGAAGTTGCAGAAGAAATTGGGAT
TTCTCAAGCACAAGTGTCACGTTTAGAGAAATCAGCTATTAAACAAATGAATAAGACAATTCAAGGATAA

Upstream 100 bases:

>100_bases
AGATTACGAAAAGAATTTAATAAAATGGTGTAAAGAATAAGACCAGCCGTTATGTAGGCTGGTCTTATTCTCTTTCGTTG
TATGAGGAGAGACAACGAAA

Downstream 100 bases:

>100_bases
GGTTTCACCATTTATGGTGAAACCTTTTTATATGTCATATAGTTTGTTTACGCTCATAGTAGAGTAGCTGTGTTCATATA
ATGAAAACAATATGGGATTG

Product: sporulation sigma factor SigG

Products: NA

Alternate protein names: Stage III sporulation protein G [H]

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MKNEEKTACIKSPSKEILYTVQQLPIGGNTLTRNKVEICGVDTAKLPVLKNDEMRKLFREMQSGEISAREKLVNGNLRLV
LSVIQRFNNRGEYVDDLFQVGCIGLMKSIDNFDLGQNVKFSTYAVPMIIGEIRRYLRDNNPIRVSRSLRDIAYKALQVRE
KLIAENSKEPTAMDIAKVLEVTHEEIVFALDAIQDPVSLFEPIYNDGGDPIFVMDQLSDEKQKDEQWVEELALKEGMKRL
NDREKMIIRKRFFQGKTQMEVAEEIGISQAQVSRLEKSAIKQMNKTIQG

Sequences:

>Translated_289_residues
MKNEEKTACIKSPSKEILYTVQQLPIGGNTLTRNKVEICGVDTAKLPVLKNDEMRKLFREMQSGEISAREKLVNGNLRLV
LSVIQRFNNRGEYVDDLFQVGCIGLMKSIDNFDLGQNVKFSTYAVPMIIGEIRRYLRDNNPIRVSRSLRDIAYKALQVRE
KLIAENSKEPTAMDIAKVLEVTHEEIVFALDAIQDPVSLFEPIYNDGGDPIFVMDQLSDEKQKDEQWVEELALKEGMKRL
NDREKMIIRKRFFQGKTQMEVAEEIGISQAQVSRLEKSAIKQMNKTIQG
>Mature_289_residues
MKNEEKTACIKSPSKEILYTVQQLPIGGNTLTRNKVEICGVDTAKLPVLKNDEMRKLFREMQSGEISAREKLVNGNLRLV
LSVIQRFNNRGEYVDDLFQVGCIGLMKSIDNFDLGQNVKFSTYAVPMIIGEIRRYLRDNNPIRVSRSLRDIAYKALQVRE
KLIAENSKEPTAMDIAKVLEVTHEEIVFALDAIQDPVSLFEPIYNDGGDPIFVMDQLSDEKQKDEQWVEELALKEGMKRL
NDREKMIIRKRFFQGKTQMEVAEEIGISQAQVSRLEKSAIKQMNKTIQG

Specific function: Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is responsible for the expression of sporulation specific genes in the forespore [H]

COG id: COG1191

COG function: function code K; DNA-directed RNA polymerase specialized sigma subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sigma-70 factor family [H]

Homologues:

Organism=Escherichia coli, GI1789448, Length=247, Percent_Identity=28.7449392712551, Blast_Score=91, Evalue=6e-20,
Organism=Escherichia coli, GI1789098, Length=300, Percent_Identity=24.3333333333333, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI1789871, Length=261, Percent_Identity=27.2030651340996, Blast_Score=78, Evalue=6e-16,

Paralogues:

None

Copy number: 700 (log & stationary phase) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014284
- InterPro:   IPR014322
- InterPro:   IPR014212
- InterPro:   IPR000943
- InterPro:   IPR007627
- InterPro:   IPR007624
- InterPro:   IPR007630
- InterPro:   IPR013325
- InterPro:   IPR013324
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04542 Sigma70_r2; PF04539 Sigma70_r3; PF04545 Sigma70_r4 [H]

EC number: NA

Molecular weight: Translated: 33074; Mature: 33074

Theoretical pI: Translated: 7.20; Mature: 7.20

Prosite motif: PS00715 SIGMA70_1 ; PS00716 SIGMA70_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNEEKTACIKSPSKEILYTVQQLPIGGNTLTRNKVEICGVDTAKLPVLKNDEMRKLFRE
CCCCHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCEEEECCCHHHCCCCCCHHHHHHHHH
MQSGEISAREKLVNGNLRLVLSVIQRFNNRGEYVDDLFQVGCIGLMKSIDNFDLGQNVKF
HHCCCHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
STYAVPMIIGEIRRYLRDNNPIRVSRSLRDIAYKALQVREKLIAENSKEPTAMDIAKVLE
HHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
VTHEEIVFALDAIQDPVSLFEPIYNDGGDPIFVMDQLSDEKQKDEQWVEELALKEGMKRL
HHHHHHHHHHHHHHCHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
NDREKMIIRKRFFQGKTQMEVAEEIGISQAQVSRLEKSAIKQMNKTIQG
HHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKNEEKTACIKSPSKEILYTVQQLPIGGNTLTRNKVEICGVDTAKLPVLKNDEMRKLFRE
CCCCHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCEEEECCCHHHCCCCCCHHHHHHHHH
MQSGEISAREKLVNGNLRLVLSVIQRFNNRGEYVDDLFQVGCIGLMKSIDNFDLGQNVKF
HHCCCHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
STYAVPMIIGEIRRYLRDNNPIRVSRSLRDIAYKALQVREKLIAENSKEPTAMDIAKVLE
HHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
VTHEEIVFALDAIQDPVSLFEPIYNDGGDPIFVMDQLSDEKQKDEQWVEELALKEGMKRL
HHHHHHHHHHHHHHCHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
NDREKMIIRKRFFQGKTQMEVAEEIGISQAQVSRLEKSAIKQMNKTIQG
HHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2497052; 2459711; 9384377 [H]