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The map label for this gene is ylbJ [H]

Identifier: 52141560

GI number: 52141560

Start: 3829128

End: 3830357

Strand: Direct

Name: ylbJ [H]

Synonym: BCZK3687

Alternate gene names: 52141560

Gene position: 3829128-3830357 (Clockwise)

Preceding gene: 52141563

Following gene: 52141555

Centisome position: 72.24

GC content: 36.1

Gene sequence:

>1230_bases
ATGTATGAAAAATGGAAAACGGCTTTCCTTACCATATCAACACTTTTTTTAACCTTTTCTCTTGTACTCCACCCCCAAGC
TGCTTTACAAGCTTCCATTCGAGGGTTAAATATATGGTGGGAAGTTGTATTCCCTTCACTTTTACCGTTTTTCATCATTG
CCGAACTTCTCATTAGTATTGGTGTTGTAAAATTTATAGGCGTTATATTAGAACCACTTATGCGACCACTTTTCCGTGTT
CCAGGGATAGGCGGATTTGTTTGGGCAATGGGAATGGCTTCAGGATTTCCCGCTGGCGCCAAATTAAGCGCTAGACTGCG
CAAAAGCAATCAGCTAACACAAATTGAAGCAGAACGCCTCGTATCTTTTACAAACTCATCCAATCCACTTTTTATTTTCG
GGGCTGTTTCTATCGGTTTTTTCAATAATCCGAAATTAGGAATCGTATTAGCTGCTGCACATTATGTAAGTAATTTTGCC
GTCGGGTTACTGATGCGTTTTTACGGCAATAACAACAGTTCCACGCATGATAAACATGCTACTAAAAAACACCCTTTTCA
AAACCCTTTTTCAATTCTACACGAGACACGTATGCAAGAAAAAAGACCAATAGGAAAATTACTTGGGGACGCTATCGTTT
CTTCTATCCAAACATTACTTATGATTGGTGGATTCATTATTTTATTCTCTGTTTTAAATAAAATGATTACTGTATTTCAT
ATTACAGCAGCCCTCTCTTTTATTATGCAACATATTTTATCATTCTTCCAACTAACTACCGAATTTAGTATCCCAATATT
ATCTGGCATTTTTGAAATGACACTCGGAAGCCAAATGATTAGTCAAATAACTGAAACACCCCTCCTGCAGCAAGCTATGG
TAACAAGCTTTATTTTAGCGTTTAGCGGCCTTTCTATTCAGGCACAAGTCGCTAGCATATTAGCTGAAACAGACATTCGA
TTTAAGCCCTATTTTTTCGCACGAATTATCCAAAGTATTCTTGCTCCTATTTTTACTTTTATATTTTGGAAACCGTTTTA
TGAAAAAGTAAGCTCTTTTTCACCTATGCAAAAAGATATCCCTGTCTTTTTATCGAATCATTCCTCTATACTGCATGAAA
TTTGGACATCTTTTGTACACTACGGACCAATATTTACATTATTTTGTTTATATGTATATGTCATCTTATTATTTTTTCGG
AGCAACAAAGAAAAACCCCGTTCACTTTAA

Upstream 100 bases:

>100_bases
TAATTTTTTTCATTCCTTTTTCATACTTATGGTCTAAATTCACTACGTATCCACGTATACTGAAATGAACGTTTTTTGGG
ACAAAGGGGGATTTACTTAC

Downstream 100 bases:

>100_bases
CGGGGTTTGAAACTTTTCTTTTAAAGCACGTTCTACAACAGGAGGGACAAGGTCTACTACACTTCCTCCATATCTCGCAA
CTTCTTTCACAATGCTCGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 409; Mature: 409

Protein sequence:

>409_residues
MYEKWKTAFLTISTLFLTFSLVLHPQAALQASIRGLNIWWEVVFPSLLPFFIIAELLISIGVVKFIGVILEPLMRPLFRV
PGIGGFVWAMGMASGFPAGAKLSARLRKSNQLTQIEAERLVSFTNSSNPLFIFGAVSIGFFNNPKLGIVLAAAHYVSNFA
VGLLMRFYGNNNSSTHDKHATKKHPFQNPFSILHETRMQEKRPIGKLLGDAIVSSIQTLLMIGGFIILFSVLNKMITVFH
ITAALSFIMQHILSFFQLTTEFSIPILSGIFEMTLGSQMISQITETPLLQQAMVTSFILAFSGLSIQAQVASILAETDIR
FKPYFFARIIQSILAPIFTFIFWKPFYEKVSSFSPMQKDIPVFLSNHSSILHEIWTSFVHYGPIFTLFCLYVYVILLFFR
SNKEKPRSL

Sequences:

>Translated_409_residues
MYEKWKTAFLTISTLFLTFSLVLHPQAALQASIRGLNIWWEVVFPSLLPFFIIAELLISIGVVKFIGVILEPLMRPLFRV
PGIGGFVWAMGMASGFPAGAKLSARLRKSNQLTQIEAERLVSFTNSSNPLFIFGAVSIGFFNNPKLGIVLAAAHYVSNFA
VGLLMRFYGNNNSSTHDKHATKKHPFQNPFSILHETRMQEKRPIGKLLGDAIVSSIQTLLMIGGFIILFSVLNKMITVFH
ITAALSFIMQHILSFFQLTTEFSIPILSGIFEMTLGSQMISQITETPLLQQAMVTSFILAFSGLSIQAQVASILAETDIR
FKPYFFARIIQSILAPIFTFIFWKPFYEKVSSFSPMQKDIPVFLSNHSSILHEIWTSFVHYGPIFTLFCLYVYVILLFFR
SNKEKPRSL
>Mature_409_residues
MYEKWKTAFLTISTLFLTFSLVLHPQAALQASIRGLNIWWEVVFPSLLPFFIIAELLISIGVVKFIGVILEPLMRPLFRV
PGIGGFVWAMGMASGFPAGAKLSARLRKSNQLTQIEAERLVSFTNSSNPLFIFGAVSIGFFNNPKLGIVLAAAHYVSNFA
VGLLMRFYGNNNSSTHDKHATKKHPFQNPFSILHETRMQEKRPIGKLLGDAIVSSIQTLLMIGGFIILFSVLNKMITVFH
ITAALSFIMQHILSFFQLTTEFSIPILSGIFEMTLGSQMISQITETPLLQQAMVTSFILAFSGLSIQAQVASILAETDIR
FKPYFFARIIQSILAPIFTFIFWKPFYEKVSSFSPMQKDIPVFLSNHSSILHEIWTSFVHYGPIFTLFCLYVYVILLFFR
SNKEKPRSL

Specific function: Required for spore cortex formation [H]

COG id: COG3314

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011642
- InterPro:   IPR014226 [H]

Pfam domain/function: PF07670 Gate [H]

EC number: NA

Molecular weight: Translated: 46122; Mature: 46122

Theoretical pI: Translated: 10.36; Mature: 10.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure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CHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377; 12662922 [H]