Click here to switch to the map view.

The map label for this gene is cydB

Identifier: 52141511

GI number: 52141511

Start: 3873898

End: 3874764

Strand: Reverse

Name: cydB

Synonym: BCZK3737

Alternate gene names: NA

Gene position: 3874764-3873898 (Counterclockwise)

Preceding gene: 52141510

Following gene: 52141512

Centisome position: 73.1

GC content: 31.49

Gene sequence:

>867_bases
GTGCAAATTAGCAGTGCAATTTTATGTTTTGTCTTATATGCATATGTTATTATTGCGGCGGTTTATTTTGGGATAAGTTT
TTACGCCTATCGTTTAGCGAATAATAATGAATATGAAGAGACATACAACTGGGTGAAAAGGTATTTATCACCTGTACTAG
AAATTATGAATGGGTTTGTTCTTTTTTTATTTATTGGATTAATTGCTTTTTCAACGAGCTTAGTAGGAAATAAAACTACA
TTATTTGTACTAGGTATCATTATTTTTATGTTGTTAGGAATACGGATTGGTAATACAGTATTTTGGAATGAGAGAAAAGT
AGATGGTTGGACGGGAATGTTAATCCCGTGTATGCTAGCTGCTATCGTCACGAATATAGAACATGAATATTATCAGTTGC
ATTTTTGGCTCATAATTGTTTTAACAATTCTCTCTGTTTTATATATAAGTACGGTTGTGCTAACATACATTGCAAATGAA
AAGGGAGATGTAAAAGGTACGCACTTCTTTAGAGGGCGTGCATTGTTATGGAGCGTACCAACGATGGCTGTTATAGGGAT
TATTGCGATATTAGTAAATGGGTATCAATTTACGAATTGGCAACTATTTTTAGAAAATTGGTGGATTTTCATTCTTTCGT
TTATCGCTTTTTTAGGTGCAACGCATTATTTATTCCATCAACACCATTATATATTGGCATTGCTATTCGCATTTACACAA
CTATTATTTGCTTTCTTCGGACAAGAAACGTTATTATTCGTTTTTGAAACGTTTAGTTCATTTGGAAACATATTTGTATT
TGGTATGTTAATTTTCAGTATCGCATTTTATTTACAACAGTATTTCTATATGCAAAAACAAAAATAA

Upstream 100 bases:

>100_bases
ATTGAGAAGATGATTAGTTAACTAGCTTATATATGTTTACATTTTGTGTGGAAAGTGTGTAAAATCAAGGTGAAACATAG
AAAAAAGGGTGGGGAATTAC

Downstream 100 bases:

>100_bases
GAATGATATACAGGTTTTTGTAGCAAATCTAAAGTATGTTACAATAAAAATACATAGTATTCGATGTTATTGGAGGAATT
CCTGTGGGTGAAAAAGAGAA

Product: cytochrome d ubiquinol oxidase subunit II-like protein

Products: NA

Alternate protein names: Cytochrome Bd-Type Ubiquinol Oxidase Subunit II; Cytochrome Bd-Type Quinol Oxidase Subunit 2-Like Protein; Cytochrome D Ubiquinol Oxidase Subunit II-Like Protein; Bd-Type Quinol Oxidase Subunit II; Cytochrome D Ubiquinol Oxidase Subunit II-Related Protein; Cytochrome Bd Ubiquinol Oxidase Subunit II

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MQISSAILCFVLYAYVIIAAVYFGISFYAYRLANNNEYEETYNWVKRYLSPVLEIMNGFVLFLFIGLIAFSTSLVGNKTT
LFVLGIIIFMLLGIRIGNTVFWNERKVDGWTGMLIPCMLAAIVTNIEHEYYQLHFWLIIVLTILSVLYISTVVLTYIANE
KGDVKGTHFFRGRALLWSVPTMAVIGIIAILVNGYQFTNWQLFLENWWIFILSFIAFLGATHYLFHQHHYILALLFAFTQ
LLFAFFGQETLLFVFETFSSFGNIFVFGMLIFSIAFYLQQYFYMQKQK

Sequences:

>Translated_288_residues
MQISSAILCFVLYAYVIIAAVYFGISFYAYRLANNNEYEETYNWVKRYLSPVLEIMNGFVLFLFIGLIAFSTSLVGNKTT
LFVLGIIIFMLLGIRIGNTVFWNERKVDGWTGMLIPCMLAAIVTNIEHEYYQLHFWLIIVLTILSVLYISTVVLTYIANE
KGDVKGTHFFRGRALLWSVPTMAVIGIIAILVNGYQFTNWQLFLENWWIFILSFIAFLGATHYLFHQHHYILALLFAFTQ
LLFAFFGQETLLFVFETFSSFGNIFVFGMLIFSIAFYLQQYFYMQKQK
>Mature_288_residues
MQISSAILCFVLYAYVIIAAVYFGISFYAYRLANNNEYEETYNWVKRYLSPVLEIMNGFVLFLFIGLIAFSTSLVGNKTT
LFVLGIIIFMLLGIRIGNTVFWNERKVDGWTGMLIPCMLAAIVTNIEHEYYQLHFWLIIVLTILSVLYISTVVLTYIANE
KGDVKGTHFFRGRALLWSVPTMAVIGIIAILVNGYQFTNWQLFLENWWIFILSFIAFLGATHYLFHQHHYILALLFAFTQ
LLFAFFGQETLLFVFETFSSFGNIFVFGMLIFSIAFYLQQYFYMQKQK

Specific function: Unknown

COG id: COG1294

COG function: function code C; Cytochrome bd-type quinol oxidase, subunit 2

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.10.3.-

Molecular weight: Translated: 33532; Mature: 33532

Theoretical pI: Translated: 7.68; Mature: 7.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQISSAILCFVLYAYVIIAAVYFGISFYAYRLANNNEYEETYNWVKRYLSPVLEIMNGFV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LFLFIGLIAFSTSLVGNKTTLFVLGIIIFMLLGIRIGNTVFWNERKVDGWTGMLIPCMLA
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHH
AIVTNIEHEYYQLHFWLIIVLTILSVLYISTVVLTYIANEKGDVKGTHFFRGRALLWSVP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCHHHHHHH
TMAVIGIIAILVNGYQFTNWQLFLENWWIFILSFIAFLGATHYLFHQHHYILALLFAFTQ
HHHHHHHHHHHHCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLFAFFGQETLLFVFETFSSFGNIFVFGMLIFSIAFYLQQYFYMQKQK
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQISSAILCFVLYAYVIIAAVYFGISFYAYRLANNNEYEETYNWVKRYLSPVLEIMNGFV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LFLFIGLIAFSTSLVGNKTTLFVLGIIIFMLLGIRIGNTVFWNERKVDGWTGMLIPCMLA
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHH
AIVTNIEHEYYQLHFWLIIVLTILSVLYISTVVLTYIANEKGDVKGTHFFRGRALLWSVP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCHHHHHHH
TMAVIGIIAILVNGYQFTNWQLFLENWWIFILSFIAFLGATHYLFHQHHYILALLFAFTQ
HHHHHHHHHHHHCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLFAFFGQETLLFVFETFSSFGNIFVFGMLIFSIAFYLQQYFYMQKQK
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA