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The map label for this gene is ydfS [H]

Identifier: 52141339

GI number: 52141339

Start: 4031246

End: 4031950

Strand: Reverse

Name: ydfS [H]

Synonym: BCZK3910

Alternate gene names: 52141339

Gene position: 4031950-4031246 (Counterclockwise)

Preceding gene: 52141338

Following gene: 52141340

Centisome position: 76.06

GC content: 36.17

Gene sequence:

>705_bases
ATGCATATGCATATTTTTGAAGGAGCACGGCAGCTTTCTAATAGTGAATGGGTTATTCGGGCTATTATAGCATACATATT
TTTAATATTAGTTGCGAAAGCGATGGGGCAAAGGTCTATCGCGCAACTTCGTTTTTTAGATGTTGTATTAGTGTTATTGC
TTGGTGGGAATATTTCTAACGCATTGTCTGATGAAAAAGTCGGATTACTGGGCTCGATGATTACAACGTTCATACTCGTT
GTACTTCATATTGTAAGCTCAGTTTTAATGTTGAAATGGGATAGATGGAGACGCTTTTTAGAGCCAGCACCTATCATTCT
TGTACACAATGGTTCCATTGATTTTAGCAATTTGAAAAAAGCGAGAATTACCGTGGAATATTTATTCTCGGAACTTCGTA
TGCGAAATGTGAGCGATATTCAAACGATCAAATTAGCATTATGGGAAGCGAACGGTGTCGTTTCTATATTTCGATATCCA
GAATATGAAGCAGTTTCGCGACTTGACCTTAAAGTGGCGGGAAAAAAATCTCCAGTTTCTTTTGTATTAGTAAAGGATGG
GAGGATTCAGAAAGATGTTCTTGCTTTATTAGGAAAAACAGAAGAGTGGGCGAAAGCGTTTTTAGAAAAGAATGCAGAAA
TTGAAACGATTCTGTTAGCTACAGTAGATGAGGCATTTAAAATAAATATTTTGTTAAAAAAATGA

Upstream 100 bases:

>100_bases
TGATTCGTTTCTAAACGAATCAGCTTTTTTACATATATGCTCTTAAACGTTGCAAACTAAAACAGAATAGCAGTTTGAGA
CGGGTAAGGAGTGCAAAGTG

Downstream 100 bases:

>100_bases
AAAATATACGCATTTTGTCGTTTCATACATATGATACAATAGTGTGGACAACGAAAAAGGAGGGATACGATGGGATATGT
AGAAGAATTACGAAAAATAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MHMHIFEGARQLSNSEWVIRAIIAYIFLILVAKAMGQRSIAQLRFLDVVLVLLLGGNISNALSDEKVGLLGSMITTFILV
VLHIVSSVLMLKWDRWRRFLEPAPIILVHNGSIDFSNLKKARITVEYLFSELRMRNVSDIQTIKLALWEANGVVSIFRYP
EYEAVSRLDLKVAGKKSPVSFVLVKDGRIQKDVLALLGKTEEWAKAFLEKNAEIETILLATVDEAFKINILLKK

Sequences:

>Translated_234_residues
MHMHIFEGARQLSNSEWVIRAIIAYIFLILVAKAMGQRSIAQLRFLDVVLVLLLGGNISNALSDEKVGLLGSMITTFILV
VLHIVSSVLMLKWDRWRRFLEPAPIILVHNGSIDFSNLKKARITVEYLFSELRMRNVSDIQTIKLALWEANGVVSIFRYP
EYEAVSRLDLKVAGKKSPVSFVLVKDGRIQKDVLALLGKTEEWAKAFLEKNAEIETILLATVDEAFKINILLKK
>Mature_234_residues
MHMHIFEGARQLSNSEWVIRAIIAYIFLILVAKAMGQRSIAQLRFLDVVLVLLLGGNISNALSDEKVGLLGSMITTFILV
VLHIVSSVLMLKWDRWRRFLEPAPIILVHNGSIDFSNLKKARITVEYLFSELRMRNVSDIQTIKLALWEANGVVSIFRYP
EYEAVSRLDLKVAGKKSPVSFVLVKDGRIQKDVLALLGKTEEWAKAFLEKNAEIETILLATVDEAFKINILLKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0702 family [H]

Homologues:

Organism=Escherichia coli, GI1787135, Length=145, Percent_Identity=24.8275862068966, Blast_Score=70, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007353
- InterPro:   IPR023090 [H]

Pfam domain/function: PF04239 DUF421 [H]

EC number: NA

Molecular weight: Translated: 26505; Mature: 26505

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHMHIFEGARQLSNSEWVIRAIIAYIFLILVAKAMGQRSIAQLRFLDVVLVLLLGGNISN
CCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCHH
ALSDEKVGLLGSMITTFILVVLHIVSSVLMLKWDRWRRFLEPAPIILVHNGSIDFSNLKK
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHH
ARITVEYLFSELRMRNVSDIQTIKLALWEANGVVSIFRYPEYEAVSRLDLKVAGKKSPVS
HHHHHHHHHHHHHHCCCCHHHHHEEEEEECCCEEEEEECCCHHHHHHHHEEECCCCCCEE
FVLVKDGRIQKDVLALLGKTEEWAKAFLEKNAEIETILLATVDEAFKINILLKK
EEEEECCCHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEEEECCCCEEEEEEEEC
>Mature Secondary Structure
MHMHIFEGARQLSNSEWVIRAIIAYIFLILVAKAMGQRSIAQLRFLDVVLVLLLGGNISN
CCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCHH
ALSDEKVGLLGSMITTFILVVLHIVSSVLMLKWDRWRRFLEPAPIILVHNGSIDFSNLKK
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHH
ARITVEYLFSELRMRNVSDIQTIKLALWEANGVVSIFRYPEYEAVSRLDLKVAGKKSPVS
HHHHHHHHHHHHHHCCCCHHHHHEEEEEECCCEEEEEECCCHHHHHHHHEEECCCCCCEE
FVLVKDGRIQKDVLALLGKTEEWAKAFLEKNAEIETILLATVDEAFKINILLKK
EEEEECCCHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEEEECCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]