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The map label for this gene is yizB [H]

Identifier: 52141290

GI number: 52141290

Start: 4078468

End: 4078803

Strand: Direct

Name: yizB [H]

Synonym: BCZK3958

Alternate gene names: 52141290

Gene position: 4078468-4078803 (Clockwise)

Preceding gene: 52141294

Following gene: 52141289

Centisome position: 76.94

GC content: 35.71

Gene sequence:

>336_bases
GTGAAAGGTGGTGAAATCATGCACAGCCAAATGTTAAAAGGTGTACTCGAAGGTTGTATCCTGTACATCATTTCACAAGA
AGAAGTGTACGGATATGAACTGAGTACAAAATTAAATAAACACGGATTTACATTCGTAAGCGAAGGAAGCATATATCCGT
TATTGTTACGTATGCAAAAAGAAAAATTGATTGAAGGAACATTAAAAGCCTCCTCACTTGGTCCAAAGAGAAAATATTAT
CACGTAACTGATAAAGGATTAGAACAGCTTGAAGAATTTAAACAAAGCTGGGGAATGGTTTCAACTACGGTTAACAATTT
ATTACAGGGGGAGTGA

Upstream 100 bases:

>100_bases
AATTAACACGCATTAAAGTTTTCCACTTCAGTAACTTGCGTTGCAAGTTACTGAATGTTATAATTTGGATAACAGCTACC
TTGCACAGCAAGTTACCTGA

Downstream 100 bases:

>100_bases
TGAGGATGAAAGCGAAAGACATGATTAAACTGAACAATAAAAAACGCGAACTTCTAACACCTGAAAATGAAGTTGCTTAT
AGCGATATGTTAGTTTACCT

Product: PadR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 111

Protein sequence:

>111_residues
MKGGEIMHSQMLKGVLEGCILYIISQEEVYGYELSTKLNKHGFTFVSEGSIYPLLLRMQKEKLIEGTLKASSLGPKRKYY
HVTDKGLEQLEEFKQSWGMVSTTVNNLLQGE

Sequences:

>Translated_111_residues
MKGGEIMHSQMLKGVLEGCILYIISQEEVYGYELSTKLNKHGFTFVSEGSIYPLLLRMQKEKLIEGTLKASSLGPKRKYY
HVTDKGLEQLEEFKQSWGMVSTTVNNLLQGE
>Mature_111_residues
MKGGEIMHSQMLKGVLEGCILYIISQEEVYGYELSTKLNKHGFTFVSEGSIYPLLLRMQKEKLIEGTLKASSLGPKRKYY
HVTDKGLEQLEEFKQSWGMVSTTVNNLLQGE

Specific function: Unknown

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005149
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03551 PadR [H]

EC number: NA

Molecular weight: Translated: 12605; Mature: 12605

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGGEIMHSQMLKGVLEGCILYIISQEEVYGYELSTKLNKHGFTFVSEGSIYPLLLRMQK
CCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHCCCCCCCCEEEECCCCHHHHHHHHH
EKLIEGTLKASSLGPKRKYYHVTDKGLEQLEEFKQSWGMVSTTVNNLLQGE
HHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHHHHCCHHHHHHHHHHCCC
>Mature Secondary Structure
MKGGEIMHSQMLKGVLEGCILYIISQEEVYGYELSTKLNKHGFTFVSEGSIYPLLLRMQK
CCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHCCCCCCCCEEEECCCCHHHHHHHHH
EKLIEGTLKASSLGPKRKYYHVTDKGLEQLEEFKQSWGMVSTTVNNLLQGE
HHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHHHHCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]