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The map label for this gene is yrrN [H]

Identifier: 52141125

GI number: 52141125

Start: 4231994

End: 4232923

Strand: Reverse

Name: yrrN [H]

Synonym: BCZK4126

Alternate gene names: 52141125

Gene position: 4232923-4231994 (Counterclockwise)

Preceding gene: 52141123

Following gene: 52141124

Centisome position: 79.85

GC content: 36.56

Gene sequence:

>930_bases
ATGAAGAAACCTGAATTGTTAGTAACGCCAAAAGTAGTGGCGGATATCGAACCTCTTGCGAAAGCAGGAGCAGATGCGGT
AATGATCGGCGAGCAAAAGTTTGGTTTACGTTTAGCAGGTGAGTTTTCACGTGAAGATGTGAAACAAGCTGTGAAAATTG
CACATGAAAATGGTGTAAAAGTATACGTAGCAATGAACGCTATGTTCCACAACGATAAAGTAGAAGAATTAACAGACTAT
GTTGCATTTTTAAACGAAGTACATGTAGATGCAATTGTTTTTGGAGACCCAGCAGTATTAATGGCGGTCCGCGAAGTAGC
GCCAAATATGCAATTGCACTGGAATACAGAAACAACAGCAACAAACTGGTTTACTTGTAACTACTGGGGAAAAAGAGGAG
CAAAACGTGCTGTATTAGCTCGTGAGCTTAGCTTAGATGAAATTGTTGAGTTAAAAGAAAATGCTGAAGTGGAACTTGAA
GTACAAATTCACGGTATGACTTGTATGTTCCAATCGAAGCGTTCATTAGTAGGAAACTACTTTGAGTATCAAGGACGTCA
TCTTGACATTGAAAAGAAAAAATATGAAGAGAATATGTTCTTATATGACCCAGAGCGTAACAATAAATATCCAATTTATG
AAGATGAAAATGGTACTCACATTATGAGTCCAAACGATATTTGTTTCATCGATGAGTTAGAAGAGCTAATTGATGCTGAA
ATCGACAGCTTAAAAATTGATGGTGTACTAAAAAGCTCTGAATATATTATTGAGGTAACGAAGAAATATCGTAAAGCAAT
TGATTTATGTGTAGAAGATCGTGATGCGTATTATGACGTGAAAGACGATTTATATAAAGAGATAGAAGAAATGCAACCGG
TAAATCGTCCGTTAGATACAGGATTCTTCTTTAAAGAGACGGTTTACTAA

Upstream 100 bases:

>100_bases
ACGTACAATGAATGGCTTATGAACCATGAAGGATATGATACGACGATTTTCCCAATTGGTGATGGAGTAGCTGTTAGTAA
AAAGAGAGGGTGACCAAGGT

Downstream 100 bases:

>100_bases
ACGAGGAGGGTGTAGGAAATGACTGTACAAGAAATTTCACGAGTAATCGATGGCAAACGCGTTATTGTGAAGAAACCTGA
ACTGTTAATCCCTGCGGGTA

Product: U32 family peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MKKPELLVTPKVVADIEPLAKAGADAVMIGEQKFGLRLAGEFSREDVKQAVKIAHENGVKVYVAMNAMFHNDKVEELTDY
VAFLNEVHVDAIVFGDPAVLMAVREVAPNMQLHWNTETTATNWFTCNYWGKRGAKRAVLARELSLDEIVELKENAEVELE
VQIHGMTCMFQSKRSLVGNYFEYQGRHLDIEKKKYEENMFLYDPERNNKYPIYEDENGTHIMSPNDICFIDELEELIDAE
IDSLKIDGVLKSSEYIIEVTKKYRKAIDLCVEDRDAYYDVKDDLYKEIEEMQPVNRPLDTGFFFKETVY

Sequences:

>Translated_309_residues
MKKPELLVTPKVVADIEPLAKAGADAVMIGEQKFGLRLAGEFSREDVKQAVKIAHENGVKVYVAMNAMFHNDKVEELTDY
VAFLNEVHVDAIVFGDPAVLMAVREVAPNMQLHWNTETTATNWFTCNYWGKRGAKRAVLARELSLDEIVELKENAEVELE
VQIHGMTCMFQSKRSLVGNYFEYQGRHLDIEKKKYEENMFLYDPERNNKYPIYEDENGTHIMSPNDICFIDELEELIDAE
IDSLKIDGVLKSSEYIIEVTKKYRKAIDLCVEDRDAYYDVKDDLYKEIEEMQPVNRPLDTGFFFKETVY
>Mature_309_residues
MKKPELLVTPKVVADIEPLAKAGADAVMIGEQKFGLRLAGEFSREDVKQAVKIAHENGVKVYVAMNAMFHNDKVEELTDY
VAFLNEVHVDAIVFGDPAVLMAVREVAPNMQLHWNTETTATNWFTCNYWGKRGAKRAVLARELSLDEIVELKENAEVELE
VQIHGMTCMFQSKRSLVGNYFEYQGRHLDIEKKKYEENMFLYDPERNNKYPIYEDENGTHIMSPNDICFIDELEELIDAE
IDSLKIDGVLKSSEYIIEVTKKYRKAIDLCVEDRDAYYDVKDDLYKEIEEMQPVNRPLDTGFFFKETVY

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U32 family [H]

Homologues:

Organism=Escherichia coli, GI1788397, Length=310, Percent_Identity=32.258064516129, Blast_Score=133, Evalue=2e-32,
Organism=Escherichia coli, GI87081910, Length=253, Percent_Identity=28.8537549407115, Blast_Score=104, Evalue=8e-24,
Organism=Escherichia coli, GI1789548, Length=297, Percent_Identity=25.9259259259259, Blast_Score=96, Evalue=4e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001539 [H]

Pfam domain/function: PF01136 Peptidase_U32 [H]

EC number: 3.4.-.- [C]

Molecular weight: Translated: 35693; Mature: 35693

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: PS00018 EF_HAND_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKPELLVTPKVVADIEPLAKAGADAVMIGEQKFGLRLAGEFSREDVKQAVKIAHENGVK
CCCCCEEECCHHHHCCHHHHHCCCCEEEECCCCCCEEEECCCCHHHHHHHHHHHHCCCCE
VYVAMNAMFHNDKVEELTDYVAFLNEVHVDAIVFGDPAVLMAVREVAPNMQLHWNTETTA
EEEEEEEEECCCHHHHHHHHHHHHHHHCEEEEEECCHHHHHHHHHHCCCCEEEECCCCCE
TNWFTCNYWGKRGAKRAVLARELSLDEIVELKENAEVELEVQIHGMTCMFQSKRSLVGNY
ECCEEEECCCCCCCHHHHHHHHCCHHHHHHHHCCCCEEEEEEEECEEEEEHHHHHHHHHH
FEYQGRHLDIEKKKYEENMFLYDPERNNKYPIYEDENGTHIMSPNDICFIDELEELIDAE
HHHCCCEECCHHHHCCCCEEEECCCCCCCCCEEECCCCCEEECCCCEEEHHHHHHHHCCC
IDSLKIDGVLKSSEYIIEVTKKYRKAIDLCVEDRDAYYDVKDDLYKEIEEMQPVNRPLDT
CCCEEECEEECCCHHHHHHHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHCCCCCCCCCC
GFFFKETVY
CCEEEECCC
>Mature Secondary Structure
MKKPELLVTPKVVADIEPLAKAGADAVMIGEQKFGLRLAGEFSREDVKQAVKIAHENGVK
CCCCCEEECCHHHHCCHHHHHCCCCEEEECCCCCCEEEECCCCHHHHHHHHHHHHCCCCE
VYVAMNAMFHNDKVEELTDYVAFLNEVHVDAIVFGDPAVLMAVREVAPNMQLHWNTETTA
EEEEEEEEECCCHHHHHHHHHHHHHHHCEEEEEECCHHHHHHHHHHCCCCEEEECCCCCE
TNWFTCNYWGKRGAKRAVLARELSLDEIVELKENAEVELEVQIHGMTCMFQSKRSLVGNY
ECCEEEECCCCCCCHHHHHHHHCCHHHHHHHHCCCCEEEEEEEECEEEEEHHHHHHHHHH
FEYQGRHLDIEKKKYEENMFLYDPERNNKYPIYEDENGTHIMSPNDICFIDELEELIDAE
HHHCCCEECCHHHHCCCCEEEECCCCCCCCCEEECCCCCEEECCCCEEEHHHHHHHHCCC
IDSLKIDGVLKSSEYIIEVTKKYRKAIDLCVEDRDAYYDVKDDLYKEIEEMQPVNRPLDT
CCCEEECEEECCCHHHHHHHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHCCCCCCCCCC
GFFFKETVY
CCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]