Click here to switch to the map view.

The map label for this gene is pabC [H]

Identifier: 52141122

GI number: 52141122

Start: 4233775

End: 4234845

Strand: Reverse

Name: pabC [H]

Synonym: BCZK4128

Alternate gene names: 52141122

Gene position: 4234845-4233775 (Counterclockwise)

Preceding gene: 52141121

Following gene: 52141123

Centisome position: 79.89

GC content: 35.2

Gene sequence:

>1071_bases
TTGATAGAGAATCAAGTGAAAAAGAAGCGTAGACGCATTTTTTTATTTTCGATTATTGCACTGCTTTTAGTTTGTGGTTC
AGTCTATGCGTATATTTCATCCGCATTAGGACCAGTTGATAGCGGGAATAAAAAAGAGATTGAAGTAGAAATTCCAAAGG
GATCATCTACTAGTAAAATTGGTGAGATTTTAGAAGAAAAAGGTGCTGTGAAAAGCGGTACAGTTTTTAGTTTTTATACA
AAGGCTAAATCTAAAAATTTACAAGCGGGTACATATTTATTAAATCCTTCAATGAGTGCAAAAGATGTTATGGAGCAAAT
GTCATCTGGTAATGTACATCGTCCAGCTCTTTATAAAGTGACGATAAAAGAAGGAGCACAAGTGACTGAAATTGCAGAAA
CGGTTGCAAACGAATTAAAGTGGAATAAAGATGATGTCGTACGTCAATTAAACGATAAAGCATTTATTCAAAAAATGCAG
CAAAAGTATCCGAAGTTGTTAACCGATAAAATCTTTGATAGCAATATTAAATATCCGTTAGAAGGTTATTTATATCCTGC
GACGTACTCATTTTATAAAAAAGACACGACGTTAGAAGAAGTTGTAATTCCAATGCTTGAAAAAACGAATGCAATCATTG
TTCAAAACGAGGCAAAAATGAAAGCGAAAAACTGGGATGTTCACCAGCTTTTAACATTGTCTTCACTTATTGAAGAAGAG
GCAACAGGCTTTACAGATCGTCAAAAGATCTCTAGTGTCTTTTATAATCGTTTAGCAAAAGGCATGCCACTGCAAACTGA
TCCGACGGTATTATATGCACTTGGAAAGCATAAACAACGTGTGTTATACGAAGATTTAAAGGTTAACTCACCGTACAATA
CGTATGTTGTGAAAGGATTGCCTGTCGGTCCGATTGCAAACTCTGGCAAACATTCAGTGGAAGCGGCGTTAGAACCTACG
CAAACAGATTATTATTATTTCTTAGCTGCACCAACTGGTGAAGTGTATTATGCGAAAACATTGGAAGAGCATAATGCATT
AAAGCAAAAATATATTACGAAAAAGCAGTGA

Upstream 100 bases:

>100_bases
AAGTATCTGTCAAAAATGATAGGTAAGTTTATTGTGATTTTTCATCATGTTGTATAGAAAGATGTACATATGGCCTACAA
TTGAATAAGGAGGAAGAGTT

Downstream 100 bases:

>100_bases
AATGGGGAGGGATAGCGAAAAAGGTCGCACATCCCTCTTTTTTGTGGTAAAATATATCGGGTTAAAAACTGGCAGAAGAA
TCGTTTTTAATATCAAAACG

Product: aminodeoxychorismate lyase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 356; Mature: 356

Protein sequence:

>356_residues
MIENQVKKKRRRIFLFSIIALLLVCGSVYAYISSALGPVDSGNKKEIEVEIPKGSSTSKIGEILEEKGAVKSGTVFSFYT
KAKSKNLQAGTYLLNPSMSAKDVMEQMSSGNVHRPALYKVTIKEGAQVTEIAETVANELKWNKDDVVRQLNDKAFIQKMQ
QKYPKLLTDKIFDSNIKYPLEGYLYPATYSFYKKDTTLEEVVIPMLEKTNAIIVQNEAKMKAKNWDVHQLLTLSSLIEEE
ATGFTDRQKISSVFYNRLAKGMPLQTDPTVLYALGKHKQRVLYEDLKVNSPYNTYVVKGLPVGPIANSGKHSVEAALEPT
QTDYYYFLAAPTGEVYYAKTLEEHNALKQKYITKKQ

Sequences:

>Translated_356_residues
MIENQVKKKRRRIFLFSIIALLLVCGSVYAYISSALGPVDSGNKKEIEVEIPKGSSTSKIGEILEEKGAVKSGTVFSFYT
KAKSKNLQAGTYLLNPSMSAKDVMEQMSSGNVHRPALYKVTIKEGAQVTEIAETVANELKWNKDDVVRQLNDKAFIQKMQ
QKYPKLLTDKIFDSNIKYPLEGYLYPATYSFYKKDTTLEEVVIPMLEKTNAIIVQNEAKMKAKNWDVHQLLTLSSLIEEE
ATGFTDRQKISSVFYNRLAKGMPLQTDPTVLYALGKHKQRVLYEDLKVNSPYNTYVVKGLPVGPIANSGKHSVEAALEPT
QTDYYYFLAAPTGEVYYAKTLEEHNALKQKYITKKQ
>Mature_356_residues
MIENQVKKKRRRIFLFSIIALLLVCGSVYAYISSALGPVDSGNKKEIEVEIPKGSSTSKIGEILEEKGAVKSGTVFSFYT
KAKSKNLQAGTYLLNPSMSAKDVMEQMSSGNVHRPALYKVTIKEGAQVTEIAETVANELKWNKDDVVRQLNDKAFIQKMQ
QKYPKLLTDKIFDSNIKYPLEGYLYPATYSFYKKDTTLEEVVIPMLEKTNAIIVQNEAKMKAKNWDVHQLLTLSSLIEEE
ATGFTDRQKISSVFYNRLAKGMPLQTDPTVLYALGKHKQRVLYEDLKVNSPYNTYVVKGLPVGPIANSGKHSVEAALEPT
QTDYYYFLAAPTGEVYYAKTLEEHNALKQKYITKKQ

Specific function: Unknown

COG id: COG1559

COG function: function code R; Predicted periplasmic solute-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0755 family [H]

Homologues:

Organism=Escherichia coli, GI1787339, Length=315, Percent_Identity=27.9365079365079, Blast_Score=124, Evalue=1e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003770 [H]

Pfam domain/function: PF02618 ADC_lyase [H]

EC number: NA

Molecular weight: Translated: 40173; Mature: 40173

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIENQVKKKRRRIFLFSIIALLLVCGSVYAYISSALGPVDSGNKKEIEVEIPKGSSTSKI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCHHHH
GEILEEKGAVKSGTVFSFYTKAKSKNLQAGTYLLNPSMSAKDVMEQMSSGNVHRPALYKV
HHHHHHCCCCCCCCEEEEEEHHCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCEEEEE
TIKEGAQVTEIAETVANELKWNKDDVVRQLNDKAFIQKMQQKYPKLLTDKIFDSNIKYPL
EECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
EGYLYPATYSFYKKDTTLEEVVIPMLEKTNAIIVQNEAKMKAKNWDVHQLLTLSSLIEEE
CCEEECCCHHHHHCCCCHHHHHHHHHHCCCEEEEECCCHHCCCCCCHHHHHHHHHHHHHH
ATGFTDRQKISSVFYNRLAKGMPLQTDPTVLYALGKHKQRVLYEDLKVNSPYNTYVVKGL
HCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHCCCCCCCEEEEECC
PVGPIANSGKHSVEAALEPTQTDYYYFLAAPTGEVYYAKTLEEHNALKQKYITKKQ
CCCCCCCCCCCHHHHHCCCCCCCEEEEEECCCCCEEEHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MIENQVKKKRRRIFLFSIIALLLVCGSVYAYISSALGPVDSGNKKEIEVEIPKGSSTSKI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCHHHH
GEILEEKGAVKSGTVFSFYTKAKSKNLQAGTYLLNPSMSAKDVMEQMSSGNVHRPALYKV
HHHHHHCCCCCCCCEEEEEEHHCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCEEEEE
TIKEGAQVTEIAETVANELKWNKDDVVRQLNDKAFIQKMQQKYPKLLTDKIFDSNIKYPL
EECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
EGYLYPATYSFYKKDTTLEEVVIPMLEKTNAIIVQNEAKMKAKNWDVHQLLTLSSLIEEE
CCEEECCCHHHHHCCCCHHHHHHHHHHCCCEEEEECCCHHCCCCCCHHHHHHHHHHHHHH
ATGFTDRQKISSVFYNRLAKGMPLQTDPTVLYALGKHKQRVLYEDLKVNSPYNTYVVKGL
HCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHCCCCCCCEEEEECC
PVGPIANSGKHSVEAALEPTQTDYYYFLAAPTGEVYYAKTLEEHNALKQKYITKKQ
CCCCCCCCCCCHHHHHCCCCCCCEEEEEECCCCCEEEHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]