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The map label for this gene is rng [H]

Identifier: 52141060

GI number: 52141060

Start: 4296560

End: 4297951

Strand: Reverse

Name: rng [H]

Synonym: BCZK4190

Alternate gene names: 52141060

Gene position: 4297951-4296560 (Counterclockwise)

Preceding gene: 52141059

Following gene: 52141061

Centisome position: 81.08

GC content: 35.13

Gene sequence:

>1392_bases
TTGAAAACGTTATATATGAACTACGCTGGATCGGAAAAACGCGTTGCAATTGAAGAGAATAAGAAAATTGTTGAGTTTTT
ATGGAAACGAAATGAAGAACAAGAGATTGTTGGGCATATTTATGTTGGACGTATCGTAAGAACGATTGCTGGAATGAACG
CAGCTTTTGTAAATATCGGTTTAGAAAAACATGCGTATCTTTCGTACGATGATGTACCATCTTCTTATCGAATACATGAA
GGACAAGCGGTACTCGTACAAGTTGTAAAAGAGGCAATTGATACGAAAGGGCCGAAATTGACAGCAAATATAGAATTTAC
CGGGAAATATGTCGTTTATATGCCGTATGATGAAATGCGTGCGGTTTCTCGGAAAATAAAAAACAATAAAAGAAGGCAAC
AACTACTCCAAATTGAAGTAGAAGGGACAGGAGGTTATATTTTTCGCTCTGCTTCTGAAAAAGGAGAAATTGAAGAAATA
CAAGCTGAAATGCAAAGATTACAGCAGTTATATGAAGAGTTAAAAAGAAAAGAGGACCAAGGAAAGGCACCGTTACTACT
TCATCGACCGGCAACTTTTTTAGATCGTGTATTTCAAGAAAATCCAATTGAAACGATTGAAAAAGTAGTTGTAGATACAA
GGAGTATAGTAAAAGAATTAGAAGAAAAGGTCGGTAAAGAGAAAGTATCTTTTTATAACGAAAAATCTTCCCTGTTTAAC
CATTTTGGAATAGAACGTGAAATTGAGAAAGCACTTCAAAAAATTGTGTGGCTTCCAAATGGTGCTTATTTAATTGTGGA
GCAAATGGAGACGATGACTGTAATTGATGTGAATACAGGTAAGTTTACTGGAAAACAGAATTTACAAGATACAGTTCTTC
GTACAAATGAAGTGGCAGCTGAAGAGATAGCGCGTCAATTAAGACTGCGTGATATCGGTGGTATGATATTAATTGATTTT
ATTAATATGAAAAGAAGAGAAGATAAAGAAAAGGTAAGAGAATGTCTCGTGGCTGCTATGCAAATTGATCGTACATATAC
AAGAGTGCTCGGGTTTACAGAGTTAGGGATTTTAGAGATGACACGTAAACGTAAGAAACATTCTTTACGCGACGTATTAC
TTGAAGAGTGTGCACCTTGCAAAGCGACAGGGTATGTGATGTCATATGAAACGATTGCGTATGAGCTAGAGAGAGAGCTA
ATCACATATGGCAATATAGAGGATGAGGCAGTATTAATCGCTGCACCTAAAGAACTGCAAAAACAATTTTTGCAAAAAGA
ATTACAAAAAAATATTCCATTTGAAATTTATTTCAAAGATGATATGATCGAAAAGTATGCAATTATCCGTTTTGGAAGTA
AAAAAGAAATTGTAGAACGGAAAAATAGTTAG

Upstream 100 bases:

>100_bases
ACAACTTCATCTGTTGAAGAATTAATCGGTTAGTGTTGACGTTAGCACTAACCTTTTATTATTGTAAAAGCAAAGAAGAT
TATAAAGTGAGGAAAGAATT

Downstream 100 bases:

>100_bases
TAGAACTTTCATTGACAACCGTCTATGATTCATGATAACATCTTTATGTTATAGTTTATAGCACCTAAACGGCTATATGC
TACAACCGCACAAGACAGGT

Product: ribonuclease

Products: NA

Alternate protein names: RNase G; Cytoplasmic axial filament protein [H]

Number of amino acids: Translated: 463; Mature: 463

Protein sequence:

>463_residues
MKTLYMNYAGSEKRVAIEENKKIVEFLWKRNEEQEIVGHIYVGRIVRTIAGMNAAFVNIGLEKHAYLSYDDVPSSYRIHE
GQAVLVQVVKEAIDTKGPKLTANIEFTGKYVVYMPYDEMRAVSRKIKNNKRRQQLLQIEVEGTGGYIFRSASEKGEIEEI
QAEMQRLQQLYEELKRKEDQGKAPLLLHRPATFLDRVFQENPIETIEKVVVDTRSIVKELEEKVGKEKVSFYNEKSSLFN
HFGIEREIEKALQKIVWLPNGAYLIVEQMETMTVIDVNTGKFTGKQNLQDTVLRTNEVAAEEIARQLRLRDIGGMILIDF
INMKRREDKEKVRECLVAAMQIDRTYTRVLGFTELGILEMTRKRKKHSLRDVLLEECAPCKATGYVMSYETIAYELEREL
ITYGNIEDEAVLIAAPKELQKQFLQKELQKNIPFEIYFKDDMIEKYAIIRFGSKKEIVERKNS

Sequences:

>Translated_463_residues
MKTLYMNYAGSEKRVAIEENKKIVEFLWKRNEEQEIVGHIYVGRIVRTIAGMNAAFVNIGLEKHAYLSYDDVPSSYRIHE
GQAVLVQVVKEAIDTKGPKLTANIEFTGKYVVYMPYDEMRAVSRKIKNNKRRQQLLQIEVEGTGGYIFRSASEKGEIEEI
QAEMQRLQQLYEELKRKEDQGKAPLLLHRPATFLDRVFQENPIETIEKVVVDTRSIVKELEEKVGKEKVSFYNEKSSLFN
HFGIEREIEKALQKIVWLPNGAYLIVEQMETMTVIDVNTGKFTGKQNLQDTVLRTNEVAAEEIARQLRLRDIGGMILIDF
INMKRREDKEKVRECLVAAMQIDRTYTRVLGFTELGILEMTRKRKKHSLRDVLLEECAPCKATGYVMSYETIAYELEREL
ITYGNIEDEAVLIAAPKELQKQFLQKELQKNIPFEIYFKDDMIEKYAIIRFGSKKEIVERKNS
>Mature_463_residues
MKTLYMNYAGSEKRVAIEENKKIVEFLWKRNEEQEIVGHIYVGRIVRTIAGMNAAFVNIGLEKHAYLSYDDVPSSYRIHE
GQAVLVQVVKEAIDTKGPKLTANIEFTGKYVVYMPYDEMRAVSRKIKNNKRRQQLLQIEVEGTGGYIFRSASEKGEIEEI
QAEMQRLQQLYEELKRKEDQGKAPLLLHRPATFLDRVFQENPIETIEKVVVDTRSIVKELEEKVGKEKVSFYNEKSSLFN
HFGIEREIEKALQKIVWLPNGAYLIVEQMETMTVIDVNTGKFTGKQNLQDTVLRTNEVAAEEIARQLRLRDIGGMILIDF
INMKRREDKEKVRECLVAAMQIDRTYTRVLGFTELGILEMTRKRKKHSLRDVLLEECAPCKATGYVMSYETIAYELEREL
ITYGNIEDEAVLIAAPKELQKQFLQKELQKNIPFEIYFKDDMIEKYAIIRFGSKKEIVERKNS

Specific function: Involved in the processing of the 5'-end of 16S rRNA. Could be involved in chromosome segregation and cell division. It may be one of the components of the cytoplasmic axial filaments bundles or merely regulate the formation of this structure [H]

COG id: COG1530

COG function: function code J; Ribonucleases G and E

Gene ontology:

Cell location: Cytoplasm, cytoskeleton [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

Organism=Escherichia coli, GI87082235, Length=442, Percent_Identity=34.6153846153846, Blast_Score=241, Evalue=6e-65,
Organism=Escherichia coli, GI1787325, Length=425, Percent_Identity=29.8823529411765, Blast_Score=206, Evalue=2e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR019307
- InterPro:   IPR022967
- InterPro:   IPR004659 [H]

Pfam domain/function: PF10150 RNase_E_G; PF00575 S1 [H]

EC number: 3.1.4.- [C]

Molecular weight: Translated: 53849; Mature: 53849

Theoretical pI: Translated: 7.57; Mature: 7.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTLYMNYAGSEKRVAIEENKKIVEFLWKRNEEQEIVGHIYVGRIVRTIAGMNAAFVNIG
CCEEEEECCCCCCEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEC
LEKHAYLSYDDVPSSYRIHEGQAVLVQVVKEAIDTKGPKLTANIEFTGKYVVYMPYDEMR
CCCCEEECCCCCCCCCEEECCHHHHHHHHHHHHCCCCCEEEEEEEEECEEEEEECHHHHH
AVSRKIKNNKRRQQLLQIEVEGTGGYIFRSASEKGEIEEIQAEMQRLQQLYEELKRKEDQ
HHHHHHHCCHHHHEEEEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
GKAPLLLHRPATFLDRVFQENPIETIEKVVVDTRSIVKELEEKVGKEKVSFYNEKSSLFN
CCCCEEEECCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
HFGIEREIEKALQKIVWLPNGAYLIVEQMETMTVIDVNTGKFTGKQNLQDTVLRTNEVAA
HCCCHHHHHHHHHHHEECCCCCEEEEEECCEEEEEECCCCCCCCCCCHHHHHHHHHHHHH
EEIARQLRLRDIGGMILIDFINMKRREDKEKVRECLVAAMQIDRTYTRVLGFTELGILEM
HHHHHHHHHHHCCCEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TRKRKKHSLRDVLLEECAPCKATGYVMSYETIAYELERELITYGNIEDEAVLIAAPKELQ
HHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHH
KQFLQKELQKNIPFEIYFKDDMIEKYAIIRFGSKKEIVERKNS
HHHHHHHHHHCCCEEEEECCHHHHHHHHEEECCHHHHHHCCCC
>Mature Secondary Structure
MKTLYMNYAGSEKRVAIEENKKIVEFLWKRNEEQEIVGHIYVGRIVRTIAGMNAAFVNIG
CCEEEEECCCCCCEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEC
LEKHAYLSYDDVPSSYRIHEGQAVLVQVVKEAIDTKGPKLTANIEFTGKYVVYMPYDEMR
CCCCEEECCCCCCCCCEEECCHHHHHHHHHHHHCCCCCEEEEEEEEECEEEEEECHHHHH
AVSRKIKNNKRRQQLLQIEVEGTGGYIFRSASEKGEIEEIQAEMQRLQQLYEELKRKEDQ
HHHHHHHCCHHHHEEEEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
GKAPLLLHRPATFLDRVFQENPIETIEKVVVDTRSIVKELEEKVGKEKVSFYNEKSSLFN
CCCCEEEECCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
HFGIEREIEKALQKIVWLPNGAYLIVEQMETMTVIDVNTGKFTGKQNLQDTVLRTNEVAA
HCCCHHHHHHHHHHHEECCCCCEEEEEECCEEEEEECCCCCCCCCCCHHHHHHHHHHHHH
EEIARQLRLRDIGGMILIDFINMKRREDKEKVRECLVAAMQIDRTYTRVLGFTELGILEM
HHHHHHHHHHHCCCEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TRKRKKHSLRDVLLEECAPCKATGYVMSYETIAYELERELITYGNIEDEAVLIAAPKELQ
HHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHH
KQFLQKELQKNIPFEIYFKDDMIEKYAIIRFGSKKEIVERKNS
HHHHHHHHHHCCCEEEEECCHHHHHHHHEEECCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]